RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 MYBL1P10243 752 aa13.93□□□□□ -0.18
CLK3-218ENST00000566926 SLC2A3P11169 496 aa13.93□□□□□ -0.18
CLK3-218ENST00000566926 SCNN1AP37088 669 aa13.93□□□□□ -0.18
CLK3-218ENST00000566926 KIR2DL1P43626 348 aaPredicted RBP13.93□□□□□ -0.18
CLK3-218ENST00000566926 DGKEP52429 567 aa13.93□□□□□ -0.18
CLK3-218ENST00000566926 FMO1Q01740 532 aa13.93□□□□□ -0.18
CLK3-218ENST00000566926 SLC6A3Q01959 620 aa13.93□□□□□ -0.18
CLK3-218ENST00000566926 PTPN20Q4JDL3 420 aa13.93□□□□□ -0.18
CLK3-218ENST00000566926 DCAF6Q58WW2 860 aa13.93□□□□□ -0.18
CLK3-218ENST00000566926 TAF3Q5VWG9 929 aa13.93□□□□□ -0.18
CLK3-218ENST00000566926 HEATR6Q6AI08 1181 aaKnown RBP13.93□□□□□ -0.18
CLK3-218ENST00000566926 SDE2Q6IQ49 451 aa13.93□□□□□ -0.18
CLK3-218ENST00000566926 SLC26A9Q7LBE3 791 aa13.93□□□□□ -0.18
CLK3-218ENST00000566926 ASCL5Q7RTU5 278 aa13.93□□□□□ -0.18
CLK3-218ENST00000566926 ZNF513Q8N8E2 541 aaPredicted RBP13.93□□□□□ -0.18
CLK3-218ENST00000566926 TSTD1Q8NFU3 115 aa13.93□□□□□ -0.18
CLK3-218ENST00000566926 UCMAQ8WVF2 138 aa13.93□□□□□ -0.18
CLK3-218ENST00000566926 CTNNBL1Q8WYA6 563 aaPredicted RBP13.93□□□□□ -0.18
CLK3-218ENST00000566926 BHMTQ93088 406 aa13.93□□□□□ -0.18
CLK3-218ENST00000566926 ISCUQ9H1K1 167 aa13.93□□□□□ -0.18
CLK3-218ENST00000566926 POLMQ9NP87 494 aaPredicted RBP13.93□□□□□ -0.18
CLK3-218ENST00000566926 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.93□□□□□ -0.18
CLK3-218ENST00000566926 PLK2Q9NYY3 685 aa13.93□□□□□ -0.18
CLK3-218ENST00000566926 SDK1Q7Z5N4 2213 aa13.92□□□□□ -0.18
CLK3-218ENST00000566926 OTOGLQ3ZCN5 2332 aa13.92□□□□□ -0.18
CLK3-218ENST00000566926 EP300Q09472 2414 aaPredicted RBP13.92□□□□□ -0.18
CLK3-218ENST00000566926 NPC1O15118 1278 aa13.92□□□□□ -0.18
CLK3-218ENST00000566926 KLF8O95600 359 aaPredicted RBP13.92□□□□□ -0.18
CLK3-218ENST00000566926 TRUB2O95900 331 aaKnown RBP13.92□□□□□ -0.18
CLK3-218ENST00000566926 ERBB2P04626 1255 aa13.92□□□□□ -0.18
CLK3-218ENST00000566926 MMEP08473 750 aa13.92□□□□□ -0.18
CLK3-218ENST00000566926 TMEM253P0C7T8 217 aa13.92□□□□□ -0.18
CLK3-218ENST00000566926 NOS2P35228 1153 aa13.92□□□□□ -0.18
CLK3-218ENST00000566926 GABRB2P47870 512 aa13.92□□□□□ -0.18
CLK3-218ENST00000566926 ETF1P62495 437 aaKnown RBP13.92□□□□□ -0.18
CLK3-218ENST00000566926 CRY1Q16526 586 aa13.92□□□□□ -0.18
CLK3-218ENST00000566926 MPP7Q5T2T1 576 aa13.92□□□□□ -0.18
CLK3-218ENST00000566926 SYPL2Q5VXT5 272 aa13.92□□□□□ -0.18
CLK3-218ENST00000566926 OLFML1Q6UWY5 402 aa13.92□□□□□ -0.18
CLK3-218ENST00000566926 FAM183BPQ6ZVS7 135 aa13.92□□□□□ -0.18
CLK3-218ENST00000566926 TAC4Q86UU9 113 aa13.92□□□□□ -0.18
CLK3-218ENST00000566926 CCDC117Q8IWD4 279 aaPredicted RBP13.92□□□□□ -0.18
CLK3-218ENST00000566926 DEFB106AQ8N104 65 aa13.92□□□□□ -0.18
CLK3-218ENST00000566926 C17orf53Q8N3J3 647 aaPredicted RBP13.92□□□□□ -0.18
CLK3-218ENST00000566926 CCDC33Q8N5R6 958 aa13.92□□□□□ -0.18
CLK3-218ENST00000566926 ALLCQ8N6M5 410 aa13.92□□□□□ -0.18
CLK3-218ENST00000566926 ATP6V0D2Q8N8Y2 350 aa13.92□□□□□ -0.18
CLK3-218ENST00000566926 IL17RCQ8NAC3 791 aa13.92□□□□□ -0.18
CLK3-218ENST00000566926 TXNDC5Q8NBS9 432 aaKnown RBP13.92□□□□□ -0.18
CLK3-218ENST00000566926 SLC20A1Q8WUM9 679 aa13.92□□□□□ -0.18
CLK3-218ENST00000566926 SLC39A13Q96H72 371 aa13.92□□□□□ -0.18
CLK3-218ENST00000566926 VCPIP1Q96JH7 1222 aa13.92□□□□□ -0.18
CLK3-218ENST00000566926 FCRL2Q96LA5 508 aaPredicted RBP13.92□□□□□ -0.18
CLK3-218ENST00000566926 C16orf45Q96MC5 204 aaPredicted RBP13.92□□□□□ -0.18
CLK3-218ENST00000566926 ALS2CR12Q96Q35 445 aa13.92□□□□□ -0.18
CLK3-218ENST00000566926 SLC2A13Q96QE2 648 aa13.92□□□□□ -0.18
CLK3-218ENST00000566926 LZTFL1Q9NQ48 299 aa13.92□□□□□ -0.18
CLK3-218ENST00000566926 C2orf42Q9NWW7 574 aa13.92□□□□□ -0.18
CLK3-218ENST00000566926 TJP2Q9UDY2 1190 aa13.92□□□□□ -0.18
CLK3-218ENST00000566926 EBF1Q9UH73 591 aa13.92□□□□□ -0.18
CLK3-218ENST00000566926 THADAQ6YHU6 1953 aa13.92□□□□□ -0.18
CLK3-218ENST00000566926 VPS13AQ96RL7 3174 aa13.91□□□□□ -0.18
CLK3-218ENST00000566926 GFRA2O00451 464 aa13.91□□□□□ -0.18
CLK3-218ENST00000566926 AXIN1O15169 862 aa13.91□□□□□ -0.18
CLK3-218ENST00000566926 ZBTB24O43167 697 aaPredicted RBP13.91□□□□□ -0.18
CLK3-218ENST00000566926 TIMM44O43615 452 aa13.91□□□□□ -0.18
CLK3-218ENST00000566926 TSPAN3O60637 253 aa13.91□□□□□ -0.18
CLK3-218ENST00000566926 DAB1O75553 588 aa13.91□□□□□ -0.18
CLK3-218ENST00000566926 IGLV3-25P01717 112 aa13.91□□□□□ -0.18
CLK3-218ENST00000566926 CHRNB2P17787 502 aa13.91□□□□□ -0.18
CLK3-218ENST00000566926 NTSR1P30989 418 aa13.91□□□□□ -0.18
CLK3-218ENST00000566926 ARHGAP25P42331 645 aa13.91□□□□□ -0.18
CLK3-218ENST00000566926 NSFP46459 744 aaKnown RBP13.91□□□□□ -0.18
CLK3-218ENST00000566926 NOMO3P69849 1222 aa13.91□□□□□ -0.18
CLK3-218ENST00000566926 CENPCQ03188 943 aa13.91□□□□□ -0.18
CLK3-218ENST00000566926 MESP2Q0VG99 397 aa13.91□□□□□ -0.18
CLK3-218ENST00000566926 SIM2Q14190 667 aaPredicted RBP13.91□□□□□ -0.18
CLK3-218ENST00000566926 EIF4HQ15056 248 aaKnown RBP13.91□□□□□ -0.18
CLK3-218ENST00000566926 TCEAL1Q15170 157 aa13.91□□□□□ -0.18
CLK3-218ENST00000566926 CLEC16AQ2KHT3 1053 aa13.91□□□□□ -0.18
CLK3-218ENST00000566926 DNTTIP2Q5QJE6 756 aaKnown RBP13.91□□□□□ -0.18
CLK3-218ENST00000566926 EMC10Q5UCC4 262 aa13.91□□□□□ -0.18
CLK3-218ENST00000566926 CEP68Q76N32 757 aa13.91□□□□□ -0.18
CLK3-218ENST00000566926 ANKS1BQ7Z6G8 1248 aa13.91□□□□□ -0.18
CLK3-218ENST00000566926 SUMF1Q8NBK3 374 aa13.91□□□□□ -0.18
CLK3-218ENST00000566926 TRIM58Q8NG06 486 aa13.91□□□□□ -0.18
CLK3-218ENST00000566926 ADAM32Q8TC27 787 aa13.91□□□□□ -0.18
CLK3-218ENST00000566926 RUBCNQ92622 972 aa13.91□□□□□ -0.18
CLK3-218ENST00000566926 RNF34Q969K3 372 aa13.91□□□□□ -0.18
CLK3-218ENST00000566926 BTN2A3PQ96KV6 586 aa13.91□□□□□ -0.18
CLK3-218ENST00000566926 HHIPQ96QV1 700 aa13.91□□□□□ -0.18
CLK3-218ENST00000566926 FAM204AQ9H8W3 233 aa13.91□□□□□ -0.18
CLK3-218ENST00000566926 STAP1Q9ULZ2 295 aa13.91□□□□□ -0.18
CLK3-218ENST00000566926 SMG5Q9UPR3 1016 aaKnown RBP13.91□□□□□ -0.18
CLK3-218ENST00000566926 PLXND1Q9Y4D7 1925 aa13.91□□□□□ -0.18
CLK3-218ENST00000566926 CEP192Q8TEP8 1941 aa13.9□□□□□ -0.18
CLK3-218ENST00000566926 SGK1O00141 431 aa13.9□□□□□ -0.18
CLK3-218ENST00000566926 TRIM24O15164 1050 aa13.9□□□□□ -0.18
CLK3-218ENST00000566926 F9P00740 461 aa13.9□□□□□ -0.18
CLK3-218ENST00000566926 FTLP02792 175 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms