RNA–Protein interactions for RNA: ENST00000566889.5

FANCA-221, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-221ENST00000566889 C7orf72A4D263 438 aa25.67■■□□□ 1.7
FANCA-221ENST00000566889 HTR3EA5X5Y0 456 aa25.67■■□□□ 1.7
FANCA-221ENST00000566889 NOP56O00567 594 aaKnown RBP25.67■■□□□ 1.7
FANCA-221ENST00000566889 ZNF24P17028 368 aa25.67■■□□□ 1.7
FANCA-221ENST00000566889 SERPINB5P36952 375 aa25.67■■□□□ 1.7
FANCA-221ENST00000566889 NAB1Q13506 487 aa25.67■■□□□ 1.7
FANCA-221ENST00000566889 RFTN1Q14699 578 aaPredicted RBP25.67■■□□□ 1.7
FANCA-221ENST00000566889 CCDC153Q494R4 210 aa25.67■■□□□ 1.7
FANCA-221ENST00000566889 PTPN20Q4JDL3 420 aa25.67■■□□□ 1.7
FANCA-221ENST00000566889 SLFN12LQ6IEE8 588 aa25.67■■□□□ 1.7
FANCA-221ENST00000566889 DDHD1Q8NEL9 900 aa25.67■■□□□ 1.7
FANCA-221ENST00000566889 TRAF3IP1Q8TDR0 691 aaPredicted RBP25.67■■□□□ 1.7
FANCA-221ENST00000566889 CDKL2Q92772 493 aa25.67■■□□□ 1.7
FANCA-221ENST00000566889 ZNF512Q96ME7 567 aaPredicted RBP25.67■■□□□ 1.7
FANCA-221ENST00000566889 WRNIP1Q96S55 665 aa25.67■■□□□ 1.7
FANCA-221ENST00000566889 RMI1Q9H9A7 625 aa25.67■■□□□ 1.7
FANCA-221ENST00000566889 OLAHQ9NV23 265 aa25.67■■□□□ 1.7
FANCA-221ENST00000566889 CNTNAP2Q9UHC6 1331 aa25.67■■□□□ 1.7
FANCA-221ENST00000566889 RBM47A0AV96 593 aaKnown RBP25.67■■□□□ 1.7
FANCA-221ENST00000566889 TMEM114B3SHH9 223 aa25.67■■□□□ 1.7
FANCA-221ENST00000566889 RNASEH2AO75792 299 aaKnown RBP25.67■■□□□ 1.7
FANCA-221ENST00000566889 ALDH1A2O94788 518 aa25.67■■□□□ 1.7
FANCA-221ENST00000566889 PRKCGP05129 697 aa25.67■■□□□ 1.7
FANCA-221ENST00000566889 TPSB2P20231 275 aa25.67■■□□□ 1.7
FANCA-221ENST00000566889 EPHA3P29320 983 aa25.67■■□□□ 1.7
FANCA-221ENST00000566889 HOXA10P31260 410 aaPredicted RBP25.67■■□□□ 1.7
FANCA-221ENST00000566889 PSMC1P62191 440 aaKnown RBP25.67■■□□□ 1.7
FANCA-221ENST00000566889 HERC3Q15034 1050 aa25.67■■□□□ 1.7
FANCA-221ENST00000566889 TPSAB1Q15661 275 aa25.67■■□□□ 1.7
FANCA-221ENST00000566889 FAM160B2Q86V87 743 aa25.67■■□□□ 1.7
FANCA-221ENST00000566889 CEP170P1Q96L14 293 aa25.67■■□□□ 1.7
FANCA-221ENST00000566889 ZC3H12CQ9C0D7 883 aaKnown RBP25.67■■□□□ 1.7
FANCA-221ENST00000566889 XPNPEP3Q9NQH7 507 aa25.67■■□□□ 1.7
FANCA-221ENST00000566889 PCDHAC2Q9Y5I4 1007 aa25.67■■□□□ 1.7
FANCA-221ENST00000566889 TRIM64CA6NLI5 447 aa25.66■■□□□ 1.7
FANCA-221ENST00000566889 ASS1P00966 412 aaKnown RBP25.66■■□□□ 1.7
FANCA-221ENST00000566889 OCM2P0CE71 109 aa25.66■■□□□ 1.7
FANCA-221ENST00000566889 OCMP0CE72 109 aaPredicted RBP25.66■■□□□ 1.7
FANCA-221ENST00000566889 CCR3P51677 355 aa25.66■■□□□ 1.7
FANCA-221ENST00000566889 IKBKEQ14164 716 aa25.66■■□□□ 1.7
FANCA-221ENST00000566889 TAF5Q15542 800 aa25.66■■□□□ 1.7
FANCA-221ENST00000566889 ITPRIPL1Q6GPH6 555 aa25.66■■□□□ 1.7
FANCA-221ENST00000566889 DCDC5Q6ZRR9 648 aa25.66■■□□□ 1.7
FANCA-221ENST00000566889 ILDR2Q71H61 639 aa25.66■■□□□ 1.7
FANCA-221ENST00000566889 RDM1Q8NG50 284 aa25.66■■□□□ 1.7
FANCA-221ENST00000566889 TMEM79Q9BSE2 394 aa25.66■■□□□ 1.7
FANCA-221ENST00000566889 SLC4A5Q9BY07 1137 aa25.66■■□□□ 1.7
FANCA-221ENST00000566889 ZNF341Q9BYN7 854 aa25.66■■□□□ 1.7
FANCA-221ENST00000566889 LHX5Q9H2C1 402 aa25.66■■□□□ 1.7
FANCA-221ENST00000566889 MAN1C1Q9NR34 630 aa25.66■■□□□ 1.7
FANCA-221ENST00000566889 TMX2Q9Y320 296 aa25.66■■□□□ 1.7
FANCA-221ENST00000566889 SOBPA7XYQ1 873 aa25.65■■□□□ 1.7
FANCA-221ENST00000566889 ACOT8O14734 319 aa25.65■■□□□ 1.7
FANCA-221ENST00000566889 HSPA4LO95757 839 aa25.65■■□□□ 1.7
FANCA-221ENST00000566889 BCAP31P51572 246 aa25.65■■□□□ 1.7
FANCA-221ENST00000566889 AP3M2P53677 418 aa25.65■■□□□ 1.7
FANCA-221ENST00000566889 MMRN1Q13201 1228 aa25.65■■□□□ 1.7
FANCA-221ENST00000566889 VPS72Q15906 364 aa25.65■■□□□ 1.7
FANCA-221ENST00000566889 KCTD21Q4G0X4 260 aa25.65■■□□□ 1.7
FANCA-221ENST00000566889 STEAP4Q687X5 459 aa25.65■■□□□ 1.7
FANCA-221ENST00000566889 CLVS1Q8IUQ0 354 aaPredicted RBP25.65■■□□□ 1.7
FANCA-221ENST00000566889 CPSF7Q8N684 471 aaKnown RBP25.65■■□□□ 1.7
FANCA-221ENST00000566889 KLHL32Q96NJ5 620 aa25.65■■□□□ 1.7
FANCA-221ENST00000566889 CISHQ9NSE2 258 aa25.65■■□□□ 1.7
FANCA-221ENST00000566889 ASNSD1Q9NWL6 643 aa25.65■■□□□ 1.7
FANCA-221ENST00000566889 SELENONQ9NZV5 590 aa25.65■■□□□ 1.7
FANCA-221ENST00000566889 PTBP2Q9UKA9 531 aaKnown RBP25.65■■□□□ 1.7
FANCA-221ENST00000566889 CLEC11AQ9Y240 323 aa25.65■■□□□ 1.7
FANCA-221ENST00000566889 A0A087WXM4 84 aa25.65■■□□□ 1.7
FANCA-221ENST00000566889 FAM155AB1AL88 458 aaPredicted RBP25.65■■□□□ 1.7
FANCA-221ENST00000566889 DGAT1O75907 488 aa25.65■■□□□ 1.7
FANCA-221ENST00000566889 BAIAP3O94812 1187 aa25.65■■□□□ 1.7
FANCA-221ENST00000566889 TGM2P21980 687 aa25.65■■□□□ 1.7
FANCA-221ENST00000566889 CDH6P55285 790 aa25.65■■□□□ 1.7
FANCA-221ENST00000566889 SOX10P56693 466 aa25.65■■□□□ 1.7
FANCA-221ENST00000566889 ZNF534Q76KX8 674 aa25.65■■□□□ 1.7
FANCA-221ENST00000566889 OR5B17Q8NGF7 314 aa25.65■■□□□ 1.7
FANCA-221ENST00000566889 ADAMTS16Q8TE57 1224 aa25.65■■□□□ 1.7
FANCA-221ENST00000566889 SREK1Q8WXA9 508 aaKnown RBP25.65■■□□□ 1.7
FANCA-221ENST00000566889 COQ10BQ9H8M1 238 aa25.65■■□□□ 1.7
FANCA-221ENST00000566889 WDR41Q9HAD4 459 aa25.65■■□□□ 1.7
FANCA-221ENST00000566889 PALMDQ9NP74 551 aa25.65■■□□□ 1.7
FANCA-221ENST00000566889 SLC38A7Q9NVC3 462 aa25.65■■□□□ 1.7
FANCA-221ENST00000566889 COL20A1Q9P218 1284 aa25.65■■□□□ 1.7
FANCA-221ENST00000566889 RBL1P28749 1068 aa25.64■■□□□ 1.7
FANCA-221ENST00000566889 MRPS9P82933 396 aaKnown RBP25.64■■□□□ 1.7
FANCA-221ENST00000566889 NIPAL4Q0D2K0 466 aa25.64■■□□□ 1.7
FANCA-221ENST00000566889 NRF1Q16656 503 aa25.64■■□□□ 1.7
FANCA-221ENST00000566889 CCDC80Q76M96 950 aa25.64■■□□□ 1.7
FANCA-221ENST00000566889 SLC15A3Q8IY34 581 aa25.64■■□□□ 1.7
FANCA-221ENST00000566889 ZNF781Q8N8C0 355 aa25.64■■□□□ 1.7
FANCA-221ENST00000566889 C12orf43Q96C57 262 aaKnown RBP25.64■■□□□ 1.7
FANCA-221ENST00000566889 RNF157Q96PX1 679 aa25.64■■□□□ 1.7
FANCA-221ENST00000566889 ANKRD60Q9BZ19 345 aa25.64■■□□□ 1.7
FANCA-221ENST00000566889 PAIP1Q9H074 479 aaKnown RBP25.64■■□□□ 1.7
FANCA-221ENST00000566889 LRRC37AA6NMS7 1700 aa25.64■■□□□ 1.7
FANCA-221ENST00000566889 HK2P52789 917 aa25.64■■□□□ 1.69
FANCA-221ENST00000566889 SLC5A3P53794 718 aa25.64■■□□□ 1.69
FANCA-221ENST00000566889 PKNOX1P55347 436 aa25.64■■□□□ 1.69
FANCA-221ENST00000566889 AMIGO3Q86WK7 504 aa25.64■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms