RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 KCNJ12Q14500 433 aa9.46□□□□□ -0.9
VPS9D1-205ENST00000565452 NCAPHQ15003 741 aa9.46□□□□□ -0.9
VPS9D1-205ENST00000565452 IGFBP7Q16270 282 aa9.46□□□□□ -0.9
VPS9D1-205ENST00000565452 TMEM119Q4V9L6 283 aa9.46□□□□□ -0.9
VPS9D1-205ENST00000565452 NAPEPLDQ6IQ20 393 aa9.46□□□□□ -0.9
VPS9D1-205ENST00000565452 FOXR1Q6PIV2 292 aa9.46□□□□□ -0.9
VPS9D1-205ENST00000565452 ZNF276Q8N554 614 aa9.46□□□□□ -0.9
VPS9D1-205ENST00000565452 CYB5D2Q8WUJ1 264 aa9.46□□□□□ -0.9
VPS9D1-205ENST00000565452 P2RY11Q96G91 374 aa9.46□□□□□ -0.9
VPS9D1-205ENST00000565452 FAM84AQ96KN4 292 aa9.46□□□□□ -0.9
VPS9D1-205ENST00000565452 TNIP3Q96KP6 325 aa9.46□□□□□ -0.9
VPS9D1-205ENST00000565452 CDK5RAP1Q96SZ6 601 aaKnown RBP9.46□□□□□ -0.9
VPS9D1-205ENST00000565452 RSPH9Q9H1X1 276 aaPredicted RBP9.46□□□□□ -0.9
VPS9D1-205ENST00000565452 IKZF4Q9H2S9 585 aa9.46□□□□□ -0.9
VPS9D1-205ENST00000565452 FOXD4L1Q9NU39 408 aa9.46□□□□□ -0.9
VPS9D1-205ENST00000565452 GEMIN8Q9NWZ8 242 aaKnown RBP9.46□□□□□ -0.9
VPS9D1-205ENST00000565452 TJP2Q9UDY2 1190 aa9.46□□□□□ -0.9
VPS9D1-205ENST00000565452 FZD4Q9ULV1 537 aa9.46□□□□□ -0.9
VPS9D1-205ENST00000565452 CLEC4EQ9ULY5 219 aa9.46□□□□□ -0.9
VPS9D1-205ENST00000565452 MTMR6Q9Y217 621 aa9.46□□□□□ -0.9
VPS9D1-205ENST00000565452 PCDHB13Q9Y5F0 798 aa9.46□□□□□ -0.9
VPS9D1-205ENST00000565452 TBC1D3DA0A087WVF3 549 aa9.45□□□□□ -0.9
VPS9D1-205ENST00000565452 TBC1D3IA0A087WXS9 549 aa9.45□□□□□ -0.9
VPS9D1-205ENST00000565452 TBC1D3EA0A087X179 549 aa9.45□□□□□ -0.9
VPS9D1-205ENST00000565452 TBC1D3KA0A087X1G2 549 aa9.45□□□□□ -0.9
VPS9D1-205ENST00000565452 TBC1D3FA6NER0 549 aaPredicted RBP9.45□□□□□ -0.9
VPS9D1-205ENST00000565452 NEMP2A6NFY4 417 aa9.45□□□□□ -0.9
VPS9D1-205ENST00000565452 ZNF233A6NK53 670 aa9.45□□□□□ -0.9
VPS9D1-205ENST00000565452 TBC1D3LB9A6J9 549 aa9.45□□□□□ -0.9
VPS9D1-205ENST00000565452 KIAA0391O15091 583 aaKnown RBP9.45□□□□□ -0.9
VPS9D1-205ENST00000565452 LZTS3O60299 673 aaPredicted RBP9.45□□□□□ -0.9
VPS9D1-205ENST00000565452 CST3P01034 146 aaPredicted RBP9.45□□□□□ -0.9
VPS9D1-205ENST00000565452 DLDP09622 509 aaKnown RBP9.45□□□□□ -0.9
VPS9D1-205ENST00000565452 TBC1D3HP0C7X1 549 aa9.45□□□□□ -0.9
VPS9D1-205ENST00000565452 RALAP11233 206 aa9.45□□□□□ -0.9
VPS9D1-205ENST00000565452 DGKAP23743 735 aa9.45□□□□□ -0.9
VPS9D1-205ENST00000565452 UBA7P41226 1012 aa9.45□□□□□ -0.9
VPS9D1-205ENST00000565452 PSEN1P49768 467 aa9.45□□□□□ -0.9
VPS9D1-205ENST00000565452 MCM6Q14566 821 aa9.45□□□□□ -0.9
VPS9D1-205ENST00000565452 NUMA1Q14980 2115 aa9.45□□□□□ -0.9
VPS9D1-205ENST00000565452 TBR1Q16650 682 aa9.45□□□□□ -0.9
VPS9D1-205ENST00000565452 MPPE1Q53F39 396 aa9.45□□□□□ -0.9
VPS9D1-205ENST00000565452 ARL6IP4Q66PJ3 421 aaKnown RBP9.45□□□□□ -0.9
VPS9D1-205ENST00000565452 TBC1D3GQ6DHY5 549 aa9.45□□□□□ -0.9
VPS9D1-205ENST00000565452 TBC1D3CQ6IPX1 549 aa9.45□□□□□ -0.9
VPS9D1-205ENST00000565452 PAQR9Q6ZVX9 377 aa9.45□□□□□ -0.9
VPS9D1-205ENST00000565452 CHST9Q7L1S5 443 aa9.45□□□□□ -0.9
VPS9D1-205ENST00000565452 TRAPPC11Q7Z392 1133 aa9.45□□□□□ -0.9
VPS9D1-205ENST00000565452 C14orf80Q86SX3 495 aa9.45□□□□□ -0.9
VPS9D1-205ENST00000565452 CLEC14AQ86T13 490 aa9.45□□□□□ -0.9
VPS9D1-205ENST00000565452 FAM35AQ86V20 835 aa9.45□□□□□ -0.9
VPS9D1-205ENST00000565452 TBC1D3Q8IZP1 549 aaPredicted RBP9.45□□□□□ -0.9
VPS9D1-205ENST00000565452 CPXM2Q8N436 756 aa9.45□□□□□ -0.9
VPS9D1-205ENST00000565452 ZSWIM2Q8NEG5 633 aa9.45□□□□□ -0.9
VPS9D1-205ENST00000565452 OR5B17Q8NGF7 314 aa9.45□□□□□ -0.9
VPS9D1-205ENST00000565452 WDR36Q8NI36 951 aaKnown RBP9.45□□□□□ -0.9
VPS9D1-205ENST00000565452 ATXN7L3BQ96GX2 97 aa9.45□□□□□ -0.9
VPS9D1-205ENST00000565452 PRR11Q96HE9 360 aaPredicted RBP9.45□□□□□ -0.9
VPS9D1-205ENST00000565452 PCIF1Q9H4Z3 704 aa9.45□□□□□ -0.9
VPS9D1-205ENST00000565452 MRPL44Q9H9J2 332 aaKnown RBP9.45□□□□□ -0.9
VPS9D1-205ENST00000565452 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.45□□□□□ -0.9
VPS9D1-205ENST00000565452 OSER1Q9NX31 292 aa9.45□□□□□ -0.9
VPS9D1-205ENST00000565452 NUDT5Q9UKK9 219 aa9.45□□□□□ -0.9
VPS9D1-205ENST00000565452 AGO1Q9UL18 857 aaKnown RBP9.45□□□□□ -0.9
VPS9D1-205ENST00000565452 NME7Q9Y5B8 376 aa9.45□□□□□ -0.9
VPS9D1-205ENST00000565452 MORC2Q9Y6X9 1032 aaPredicted RBP9.45□□□□□ -0.9
VPS9D1-205ENST00000565452 TLN1Q9Y490 2541 aaKnown RBP9.44□□□□□ -0.9
VPS9D1-205ENST00000565452 A0A1W2PP55 124 aa9.44□□□□□ -0.9
VPS9D1-205ENST00000565452 VWA3AA6NCI4 1184 aa9.44□□□□□ -0.9
VPS9D1-205ENST00000565452 RIOK3O14730 519 aaKnown RBP9.44□□□□□ -0.9
VPS9D1-205ENST00000565452 MDM4O15151 490 aa9.44□□□□□ -0.9
VPS9D1-205ENST00000565452 MID1O15344 667 aa9.44□□□□□ -0.9
VPS9D1-205ENST00000565452 FFAR2O15552 330 aa9.44□□□□□ -0.9
VPS9D1-205ENST00000565452 HMBSP08397 361 aa9.44□□□□□ -0.9
VPS9D1-205ENST00000565452 GOT1P17174 413 aa9.44□□□□□ -0.9
VPS9D1-205ENST00000565452 POLR2EP19388 210 aaKnown RBP9.44□□□□□ -0.9
VPS9D1-205ENST00000565452 CORO1AP31146 461 aaKnown RBP9.44□□□□□ -0.9
VPS9D1-205ENST00000565452 SLC8A1P32418 973 aa9.44□□□□□ -0.9
VPS9D1-205ENST00000565452 MAP3K7CLP57077 242 aa9.44□□□□□ -0.9
VPS9D1-205ENST00000565452 ST8SIA6P61647 398 aa9.44□□□□□ -0.9
VPS9D1-205ENST00000565452 TRPC3Q13507 836 aa9.44□□□□□ -0.9
VPS9D1-205ENST00000565452 CST6Q15828 149 aa9.44□□□□□ -0.9
VPS9D1-205ENST00000565452 KMT5BQ4FZB7 885 aa9.44□□□□□ -0.9
VPS9D1-205ENST00000565452 L1TD1Q5T7N2 865 aaKnown RBP9.44□□□□□ -0.9
VPS9D1-205ENST00000565452 SND1Q7KZF4 910 aaKnown RBP eCLIP9.44□□□□□ -0.9
VPS9D1-205ENST00000565452 PTRH1Q86Y79 214 aaKnown RBP9.44□□□□□ -0.9
VPS9D1-205ENST00000565452 WDR49Q8IV35 697 aa9.44□□□□□ -0.9
VPS9D1-205ENST00000565452 DENND1CQ8IV53 801 aa9.44□□□□□ -0.9
VPS9D1-205ENST00000565452 GPD1LQ8N335 351 aa9.44□□□□□ -0.9
VPS9D1-205ENST00000565452 OR14C36Q8NHC7 312 aa9.44□□□□□ -0.9
VPS9D1-205ENST00000565452 TMA16Q96EY4 203 aaKnown RBP9.44□□□□□ -0.9
VPS9D1-205ENST00000565452 KLHDC7BQ96G42 594 aa9.44□□□□□ -0.9
VPS9D1-205ENST00000565452 APOLD1Q96LR9 279 aa9.44□□□□□ -0.9
VPS9D1-205ENST00000565452 AK8Q96MA6 479 aa9.44□□□□□ -0.9
VPS9D1-205ENST00000565452 ZNF396Q96N95 335 aaPredicted RBP9.44□□□□□ -0.9
VPS9D1-205ENST00000565452 SMOQ99835 787 aa9.44□□□□□ -0.9
VPS9D1-205ENST00000565452 STRA6Q9BX79 667 aa9.44□□□□□ -0.9
VPS9D1-205ENST00000565452 ADNPQ9H2P0 1102 aa9.44□□□□□ -0.9
VPS9D1-205ENST00000565452 CSNK1G1Q9HCP0 422 aa9.44□□□□□ -0.9
VPS9D1-205ENST00000565452 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms