RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 AZIN2Q96A70 460 aa8.93□□□□□ -0.98
CAPN3-213ENST00000565173 MYO19Q96H55 970 aa8.93□□□□□ -0.98
CAPN3-213ENST00000565173 DHTKD1Q96HY7 919 aaPredicted RBP8.93□□□□□ -0.98
CAPN3-213ENST00000565173 HSFY1Q96LI6 401 aa8.93□□□□□ -0.98
CAPN3-213ENST00000565173 CEP63Q96MT8 703 aa8.93□□□□□ -0.98
CAPN3-213ENST00000565173 ORAI3Q9BRQ5 295 aa8.93□□□□□ -0.98
CAPN3-213ENST00000565173 IRX2Q9BZI1 471 aaPredicted RBP8.93□□□□□ -0.98
CAPN3-213ENST00000565173 PCED1AQ9H1Q7 454 aa8.93□□□□□ -0.98
CAPN3-213ENST00000565173 GAREM1Q9H706 876 aa8.93□□□□□ -0.98
CAPN3-213ENST00000565173 MAN1B1Q9UKM7 699 aa8.93□□□□□ -0.98
CAPN3-213ENST00000565173 PCOLCE2Q9UKZ9 415 aa8.93□□□□□ -0.98
CAPN3-213ENST00000565173 CNTN6Q9UQ52 1028 aa8.93□□□□□ -0.98
CAPN3-213ENST00000565173 FNDC3AQ9Y2H6 1198 aaKnown RBP8.93□□□□□ -0.98
CAPN3-213ENST00000565173 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.93□□□□□ -0.98
CAPN3-213ENST00000565173 PCDHB4Q9Y5E5 795 aa8.93□□□□□ -0.98
CAPN3-213ENST00000565173 FAM208BQ5VWN6 2430 aa8.92□□□□□ -0.98
CAPN3-213ENST00000565173 A0A1B0GVT2 93 aa8.92□□□□□ -0.98
CAPN3-213ENST00000565173 IRAK2O43187 625 aa8.92□□□□□ -0.98
CAPN3-213ENST00000565173 ACSL4O60488 711 aa8.92□□□□□ -0.98
CAPN3-213ENST00000565173 TBL1XO60907 577 aa8.92□□□□□ -0.98
CAPN3-213ENST00000565173 DKK1O94907 266 aa8.92□□□□□ -0.98
CAPN3-213ENST00000565173 FTH1P19P0C7X4 201 aa8.92□□□□□ -0.98
CAPN3-213ENST00000565173 RDXP35241 583 aaKnown RBP8.92□□□□□ -0.98
CAPN3-213ENST00000565173 MATKP42679 507 aa8.92□□□□□ -0.98
CAPN3-213ENST00000565173 GPD2P43304 727 aa8.92□□□□□ -0.98
CAPN3-213ENST00000565173 SLC11A2P49281 568 aa8.92□□□□□ -0.98
CAPN3-213ENST00000565173 CSNK1EP49674 416 aaKnown RBP8.92□□□□□ -0.98
CAPN3-213ENST00000565173 ARID5AQ03989 594 aa8.92□□□□□ -0.98
CAPN3-213ENST00000565173 RING1Q06587 406 aa8.92□□□□□ -0.98
CAPN3-213ENST00000565173 STILQ15468 1287 aa8.92□□□□□ -0.98
CAPN3-213ENST00000565173 FNDC3BQ53EP0 1204 aaKnown RBP8.92□□□□□ -0.98
CAPN3-213ENST00000565173 KCNT1Q5JUK3 1230 aa8.92□□□□□ -0.98
CAPN3-213ENST00000565173 FOXR2Q6PJQ5 311 aa8.92□□□□□ -0.98
CAPN3-213ENST00000565173 CCNI2Q6ZMN8 369 aaPredicted RBP8.92□□□□□ -0.98
CAPN3-213ENST00000565173 RRAGAQ7L523 313 aa8.92□□□□□ -0.98
CAPN3-213ENST00000565173 ARHGEF19Q8IW93 802 aa8.92□□□□□ -0.98
CAPN3-213ENST00000565173 SCUBE3Q8IX30 993 aa8.92□□□□□ -0.98
CAPN3-213ENST00000565173 PPM1KQ8N3J5 372 aa8.92□□□□□ -0.98
CAPN3-213ENST00000565173 EHBP1Q8NDI1 1231 aa8.92□□□□□ -0.98
CAPN3-213ENST00000565173 FIBINQ8TAL6 211 aa8.92□□□□□ -0.98
CAPN3-213ENST00000565173 BAHD1Q8TBE0 780 aaPredicted RBP8.92□□□□□ -0.98
CAPN3-213ENST00000565173 TTC17Q96AE7 1141 aa8.92□□□□□ -0.98
CAPN3-213ENST00000565173 BIRC7Q96CA5 298 aa8.92□□□□□ -0.98
CAPN3-213ENST00000565173 SLC39A13Q96H72 371 aa8.92□□□□□ -0.98
CAPN3-213ENST00000565173 FCRL2Q96LA5 508 aaPredicted RBP8.92□□□□□ -0.98
CAPN3-213ENST00000565173 MRGPRX3Q96LB0 322 aa8.92□□□□□ -0.98
CAPN3-213ENST00000565173 PRICKLE1Q96MT3 831 aaPredicted RBP8.92□□□□□ -0.98
CAPN3-213ENST00000565173 KREMEN1Q96MU8 473 aa8.92□□□□□ -0.98
CAPN3-213ENST00000565173 NT5C1BQ96P26 610 aa8.92□□□□□ -0.98
CAPN3-213ENST00000565173 GTPBP4Q9BZE4 634 aaKnown RBP8.92□□□□□ -0.98
CAPN3-213ENST00000565173 MIS12Q9H081 205 aa8.92□□□□□ -0.98
CAPN3-213ENST00000565173 LHX5Q9H2C1 402 aa8.92□□□□□ -0.98
CAPN3-213ENST00000565173 MTG2Q9H4K7 406 aa8.92□□□□□ -0.98
CAPN3-213ENST00000565173 OSGEPQ9NPF4 335 aa8.92□□□□□ -0.98
CAPN3-213ENST00000565173 TM7SF3Q9NS93 570 aa8.92□□□□□ -0.98
CAPN3-213ENST00000565173 TOR4AQ9NXH8 423 aa8.92□□□□□ -0.98
CAPN3-213ENST00000565173 KIAA1522Q9P206 1035 aaPredicted RBP8.92□□□□□ -0.98
CAPN3-213ENST00000565173 INTS6Q9UL03 887 aaKnown RBP8.92□□□□□ -0.98
CAPN3-213ENST00000565173 PCDHB9Q9Y5E1 797 aa8.92□□□□□ -0.98
CAPN3-213ENST00000565173 PCDHGB2Q9Y5G2 931 aa8.92□□□□□ -0.98
CAPN3-213ENST00000565173 NUMA1Q14980 2115 aa8.92□□□□□ -0.98
CAPN3-213ENST00000565173 GOLGA6L4A6NEF3 574 aa8.91□□□□□ -0.98
CAPN3-213ENST00000565173 C10orf142B7Z368 130 aa8.91□□□□□ -0.98
CAPN3-213ENST00000565173 M0QYV0 167 aa8.91□□□□□ -0.98
CAPN3-213ENST00000565173 PSMA7O14818 248 aa8.91□□□□□ -0.98
CAPN3-213ENST00000565173 P4HA2O15460 535 aa8.91□□□□□ -0.98
CAPN3-213ENST00000565173 FBXO21O94952 628 aa8.91□□□□□ -0.98
CAPN3-213ENST00000565173 SEMA4FO95754 770 aa8.91□□□□□ -0.98
CAPN3-213ENST00000565173 CER1O95813 267 aa8.91□□□□□ -0.98
CAPN3-213ENST00000565173 ATP5BP06576 529 aaKnown RBP8.91□□□□□ -0.98
CAPN3-213ENST00000565173 POLR2EP19388 210 aaKnown RBP8.91□□□□□ -0.98
CAPN3-213ENST00000565173 AFF3P51826 1226 aaKnown RBP8.91□□□□□ -0.98
CAPN3-213ENST00000565173 TBX4P57082 545 aa8.91□□□□□ -0.98
CAPN3-213ENST00000565173 RPS24P62847 133 aaKnown RBP8.91□□□□□ -0.98
CAPN3-213ENST00000565173 GCNT1Q02742 428 aa8.91□□□□□ -0.98
CAPN3-213ENST00000565173 ZBTB16Q05516 673 aa8.91□□□□□ -0.98
CAPN3-213ENST00000565173 EIF4EBP2Q13542 120 aaPredicted RBP8.91□□□□□ -0.98
CAPN3-213ENST00000565173 ARID5BQ14865 1188 aa8.91□□□□□ -0.98
CAPN3-213ENST00000565173 KIF19Q2TAC6 998 aa8.91□□□□□ -0.98
CAPN3-213ENST00000565173 FSCBQ5H9T9 825 aa8.91□□□□□ -0.98
CAPN3-213ENST00000565173 MS4A13Q5J8X5 152 aa8.91□□□□□ -0.98
CAPN3-213ENST00000565173 SYPL2Q5VXT5 272 aa8.91□□□□□ -0.98
CAPN3-213ENST00000565173 NUGGCQ68CJ6 796 aa8.91□□□□□ -0.98
CAPN3-213ENST00000565173 IL27RAQ6UWB1 636 aa8.91□□□□□ -0.98
CAPN3-213ENST00000565173 TRIM59Q8IWR1 403 aa8.91□□□□□ -0.98
CAPN3-213ENST00000565173 DQX1Q8TE96 717 aaKnown RBP8.91□□□□□ -0.98
CAPN3-213ENST00000565173 BTBD1Q9H0C5 482 aa8.91□□□□□ -0.98
CAPN3-213ENST00000565173 NUCKS1Q9H1E3 243 aaKnown RBP8.91□□□□□ -0.98
CAPN3-213ENST00000565173 RSPH9Q9H1X1 276 aaPredicted RBP8.91□□□□□ -0.98
CAPN3-213ENST00000565173 FBRSQ9HAH7 460 aa8.91□□□□□ -0.98
CAPN3-213ENST00000565173 TM9SF3Q9HD45 589 aa8.91□□□□□ -0.98
CAPN3-213ENST00000565173 STIM2Q9P246 746 aa8.91□□□□□ -0.98
CAPN3-213ENST00000565173 SERGEFQ9UGK8 458 aa8.91□□□□□ -0.98
CAPN3-213ENST00000565173 SUN2Q9UH99 717 aa8.91□□□□□ -0.98
CAPN3-213ENST00000565173 CYTH4Q9UIA0 394 aa8.91□□□□□ -0.98
CAPN3-213ENST00000565173 NAALADL1Q9UQQ1 740 aa8.91□□□□□ -0.98
CAPN3-213ENST00000565173 TLR6Q9Y2C9 796 aa8.91□□□□□ -0.98
CAPN3-213ENST00000565173 ANKRD6Q9Y2G4 727 aa8.91□□□□□ -0.98
CAPN3-213ENST00000565173 SNX11Q9Y5W9 270 aa8.91□□□□□ -0.98
CAPN3-213ENST00000565173 PLXNB3Q9ULL4 1909 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms