RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.48□□□□□ -0.57
SF3B3-205ENST00000564899 ARHGEF38Q9NXL2 777 aa11.48□□□□□ -0.57
SF3B3-205ENST00000564899 HBS1LQ9Y450 684 aaKnown RBP11.48□□□□□ -0.57
SF3B3-205ENST00000564899 NR2E1Q9Y466 385 aa11.48□□□□□ -0.57
SF3B3-205ENST00000564899 R4GN57 208 aa11.48□□□□□ -0.57
SF3B3-205ENST00000564899 COL4A3Q01955 1670 aa11.48□□□□□ -0.57
SF3B3-205ENST00000564899 GREB1Q4ZG55 1949 aa11.48□□□□□ -0.57
SF3B3-205ENST00000564899 MAP1BP46821 2468 aaKnown RBP11.48□□□□□ -0.57
SF3B3-205ENST00000564899 hCG_1818297A0A087WSY0 165 aa11.47□□□□□ -0.57
SF3B3-205ENST00000564899 TRAV19A0A0A6YYK7 116 aa11.47□□□□□ -0.57
SF3B3-205ENST00000564899 C3orf70A6NLC5 250 aaPredicted RBP11.47□□□□□ -0.57
SF3B3-205ENST00000564899 I6L893 689 aaPredicted RBP11.47□□□□□ -0.57
SF3B3-205ENST00000564899 RIOK3O14730 519 aaKnown RBP11.47□□□□□ -0.57
SF3B3-205ENST00000564899 OLFM2O95897 454 aa11.47□□□□□ -0.57
SF3B3-205ENST00000564899 HOXB8P17481 243 aaPredicted RBP11.47□□□□□ -0.57
SF3B3-205ENST00000564899 AOC1P19801 751 aa11.47□□□□□ -0.57
SF3B3-205ENST00000564899 L1CAMP32004 1257 aa11.47□□□□□ -0.57
SF3B3-205ENST00000564899 PTPN7P35236 360 aa11.47□□□□□ -0.57
SF3B3-205ENST00000564899 CCR2P41597 374 aa11.47□□□□□ -0.57
SF3B3-205ENST00000564899 NTHL1P78549 312 aa11.47□□□□□ -0.57
SF3B3-205ENST00000564899 DPYSL3Q14195 570 aa11.47□□□□□ -0.57
SF3B3-205ENST00000564899 ARHGAP15Q53QZ3 475 aa11.47□□□□□ -0.57
SF3B3-205ENST00000564899 TFDP3Q5H9I0 405 aa11.47□□□□□ -0.57
SF3B3-205ENST00000564899 KAZNQ674X7 775 aa11.47□□□□□ -0.57
SF3B3-205ENST00000564899 ANKS1BQ7Z6G8 1248 aa11.47□□□□□ -0.57
SF3B3-205ENST00000564899 GRASPQ7Z6J2 395 aaPredicted RBP11.47□□□□□ -0.57
SF3B3-205ENST00000564899 CCDC105Q8IYK2 499 aa11.47□□□□□ -0.57
SF3B3-205ENST00000564899 KIAA2013Q8IYS2 634 aa11.47□□□□□ -0.57
SF3B3-205ENST00000564899 PYROXD2Q8N2H3 581 aa11.47□□□□□ -0.57
SF3B3-205ENST00000564899 CEP112Q8N8E3 955 aa11.47□□□□□ -0.57
SF3B3-205ENST00000564899 MAB21L3Q8N8X9 362 aa11.47□□□□□ -0.57
SF3B3-205ENST00000564899 TDRD5Q8NAT2 981 aaKnown RBP11.47□□□□□ -0.57
SF3B3-205ENST00000564899 MNS1Q8NEH6 495 aa11.47□□□□□ -0.57
SF3B3-205ENST00000564899 SHKBP1Q8TBC3 707 aa11.47□□□□□ -0.57
SF3B3-205ENST00000564899 FAM71BQ8TC56 605 aa11.47□□□□□ -0.57
SF3B3-205ENST00000564899 TCEAL4Q96EI5 215 aa11.47□□□□□ -0.57
SF3B3-205ENST00000564899 ZNF670Q9BS34 389 aa11.47□□□□□ -0.57
SF3B3-205ENST00000564899 HEMGNQ9BXL5 484 aa11.47□□□□□ -0.57
SF3B3-205ENST00000564899 MFSD1Q9H3U5 465 aa11.47□□□□□ -0.57
SF3B3-205ENST00000564899 SLC12A6Q9UHW9 1150 aa11.47□□□□□ -0.57
SF3B3-205ENST00000564899 USP24Q9UPU5 2620 aa11.46□□□□□ -0.57
SF3B3-205ENST00000564899 CTAGE15A4D2H0 777 aa11.46□□□□□ -0.57
SF3B3-205ENST00000564899 KCNU1A8MYU2 1149 aa11.46□□□□□ -0.57
SF3B3-205ENST00000564899 H3BRJ5 948 aa11.46□□□□□ -0.57
SF3B3-205ENST00000564899 NRG2O14511 850 aaPredicted RBP11.46□□□□□ -0.57
SF3B3-205ENST00000564899 ZNF197O14709 1029 aa11.46□□□□□ -0.57
SF3B3-205ENST00000564899 CREB3O43889 395 aa11.46□□□□□ -0.57
SF3B3-205ENST00000564899 MOSPD3O75425 235 aa11.46□□□□□ -0.57
SF3B3-205ENST00000564899 PAGE1O75459 146 aa11.46□□□□□ -0.57
SF3B3-205ENST00000564899 PAPLNO95428 1278 aa11.46□□□□□ -0.57
SF3B3-205ENST00000564899 IGLV3-27P01718 113 aa11.46□□□□□ -0.57
SF3B3-205ENST00000564899 CKMP06732 381 aa11.46□□□□□ -0.57
SF3B3-205ENST00000564899 CTAGE8P0CG41 777 aa11.46□□□□□ -0.57
SF3B3-205ENST00000564899 KRT10P13645 584 aa11.46□□□□□ -0.57
SF3B3-205ENST00000564899 PFKLP17858 780 aa11.46□□□□□ -0.57
SF3B3-205ENST00000564899 HDCP19113 662 aa11.46□□□□□ -0.57
SF3B3-205ENST00000564899 DDX6P26196 483 aaKnown RBP eCLIP11.46□□□□□ -0.57
SF3B3-205ENST00000564899 ARL4AP40617 200 aa11.46□□□□□ -0.57
SF3B3-205ENST00000564899 CLCN5P51795 746 aa11.46□□□□□ -0.57
SF3B3-205ENST00000564899 COG7P83436 770 aa11.46□□□□□ -0.57
SF3B3-205ENST00000564899 RING1Q06587 406 aa11.46□□□□□ -0.57
SF3B3-205ENST00000564899 MMRN1Q13201 1228 aa11.46□□□□□ -0.57
SF3B3-205ENST00000564899 TEAD2Q15562 447 aa11.46□□□□□ -0.57
SF3B3-205ENST00000564899 TAZQ16635 292 aa11.46□□□□□ -0.57
SF3B3-205ENST00000564899 SLC5A9Q2M3M2 681 aa11.46□□□□□ -0.57
SF3B3-205ENST00000564899 PRSS36Q5K4E3 855 aa11.46□□□□□ -0.57
SF3B3-205ENST00000564899 STXBP5Q5T5C0 1151 aa11.46□□□□□ -0.57
SF3B3-205ENST00000564899 GPR158Q5T848 1215 aa11.46□□□□□ -0.57
SF3B3-205ENST00000564899 NUGGCQ68CJ6 796 aa11.46□□□□□ -0.57
SF3B3-205ENST00000564899 ZNF572Q7Z3I7 529 aaPredicted RBP11.46□□□□□ -0.57
SF3B3-205ENST00000564899 ADAT2Q7Z6V5 191 aaKnown RBP11.46□□□□□ -0.57
SF3B3-205ENST00000564899 CTAGE6Q86UF2 777 aa11.46□□□□□ -0.57
SF3B3-205ENST00000564899 VSIG1Q86XK7 387 aa11.46□□□□□ -0.57
SF3B3-205ENST00000564899 RFX6Q8HWS3 928 aa11.46□□□□□ -0.57
SF3B3-205ENST00000564899 UNC45BQ8IWX7 931 aa11.46□□□□□ -0.57
SF3B3-205ENST00000564899 CTAGE4Q8IX94 777 aa11.46□□□□□ -0.57
SF3B3-205ENST00000564899 ZDHHC14Q8IZN3 488 aa11.46□□□□□ -0.57
SF3B3-205ENST00000564899 DCLK2Q8N568 766 aa11.46□□□□□ -0.57
SF3B3-205ENST00000564899 ARL14EPQ8N8R7 260 aaPredicted RBP11.46□□□□□ -0.57
SF3B3-205ENST00000564899 ATP6V0D2Q8N8Y2 350 aa11.46□□□□□ -0.57
SF3B3-205ENST00000564899 DTWD2Q8NBA8 298 aa11.46□□□□□ -0.57
SF3B3-205ENST00000564899 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.46□□□□□ -0.57
SF3B3-205ENST00000564899 MAIP1Q8WWC4 291 aa11.46□□□□□ -0.57
SF3B3-205ENST00000564899 RSAD2Q8WXG1 361 aa11.46□□□□□ -0.57
SF3B3-205ENST00000564899 PLD4Q96BZ4 506 aa11.46□□□□□ -0.57
SF3B3-205ENST00000564899 SLC22A12Q96S37 553 aa11.46□□□□□ -0.57
SF3B3-205ENST00000564899 HAPLN3Q96S86 360 aa11.46□□□□□ -0.57
SF3B3-205ENST00000564899 EPAS1Q99814 870 aa11.46□□□□□ -0.57
SF3B3-205ENST00000564899 HERPUD2Q9BSE4 406 aa11.46□□□□□ -0.57
SF3B3-205ENST00000564899 KLF16Q9BXK1 252 aaPredicted RBP11.46□□□□□ -0.57
SF3B3-205ENST00000564899 MAK16Q9BXY0 300 aaKnown RBP11.46□□□□□ -0.57
SF3B3-205ENST00000564899 MAGEB5Q9BZ81 275 aa11.46□□□□□ -0.57
SF3B3-205ENST00000564899 RNF38Q9H0F5 515 aa11.46□□□□□ -0.57
SF3B3-205ENST00000564899 OSBPL2Q9H1P3 480 aa11.46□□□□□ -0.57
SF3B3-205ENST00000564899 SMPD4Q9NXE4 827 aa11.46□□□□□ -0.57
SF3B3-205ENST00000564899 RCOR3Q9P2K3 495 aaPredicted RBP11.46□□□□□ -0.57
SF3B3-205ENST00000564899 MRPS23Q9Y3D9 190 aaKnown RBP11.46□□□□□ -0.57
SF3B3-205ENST00000564899 SNX10Q9Y5X0 201 aa11.46□□□□□ -0.57
SF3B3-205ENST00000564899 ZNF638Q14966 1978 aaKnown RBP11.45□□□□□ -0.58
SF3B3-205ENST00000564899 CLUHO75153 1309 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms