RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 KCNT2Q6UVM3 1135 aa21.05■□□□□ 0.96
MAP1LC3B-206ENST00000564844 PACS1Q6VY07 963 aa21.05■□□□□ 0.96
MAP1LC3B-206ENST00000564844 ADGRG6Q86SQ4 1221 aa21.05■□□□□ 0.96
MAP1LC3B-206ENST00000564844 NUF2Q9BZD4 464 aa21.05■□□□□ 0.96
MAP1LC3B-206ENST00000564844 INO80BQ9C086 356 aaPredicted RBP21.05■□□□□ 0.96
MAP1LC3B-206ENST00000564844 XYLT2Q9H1B5 865 aa21.05■□□□□ 0.96
MAP1LC3B-206ENST00000564844 PNPLA8Q9NP80 782 aa21.05■□□□□ 0.96
MAP1LC3B-206ENST00000564844 STYXL1Q9Y6J8 313 aa21.05■□□□□ 0.96
MAP1LC3B-206ENST00000564844 TRDMT1O14717 391 aaKnown RBP21.04■□□□□ 0.96
MAP1LC3B-206ENST00000564844 ITGB3P05106 788 aa21.04■□□□□ 0.96
MAP1LC3B-206ENST00000564844 PTPN1P18031 435 aaKnown RBP21.04■□□□□ 0.96
MAP1LC3B-206ENST00000564844 MTTPP55157 894 aa21.04■□□□□ 0.96
MAP1LC3B-206ENST00000564844 CDH15P55291 814 aa21.04■□□□□ 0.96
MAP1LC3B-206ENST00000564844 CPNE9Q8IYJ1 553 aa21.04■□□□□ 0.96
MAP1LC3B-206ENST00000564844 TRAPPC12Q8WVT3 735 aa21.04■□□□□ 0.96
MAP1LC3B-206ENST00000564844 PTTG2Q9NZH5 202 aa21.04■□□□□ 0.96
MAP1LC3B-206ENST00000564844 CNTNAP1P78357 1384 aa21.04■□□□□ 0.96
MAP1LC3B-206ENST00000564844 ADGRA2Q96PE1 1338 aa21.04■□□□□ 0.96
MAP1LC3B-206ENST00000564844 BIRC5O15392 142 aa21.04■□□□□ 0.96
MAP1LC3B-206ENST00000564844 LTFP02788 710 aa21.04■□□□□ 0.96
MAP1LC3B-206ENST00000564844 TFPTP0C1Z6 253 aa21.04■□□□□ 0.96
MAP1LC3B-206ENST00000564844 L1CAMP32004 1257 aa21.04■□□□□ 0.96
MAP1LC3B-206ENST00000564844 NAMPTP43490 491 aa21.04■□□□□ 0.96
MAP1LC3B-206ENST00000564844 STILQ15468 1287 aa21.04■□□□□ 0.96
MAP1LC3B-206ENST00000564844 TAZQ16635 292 aa21.04■□□□□ 0.96
MAP1LC3B-206ENST00000564844 EEF1DP3Q658K8 133 aa21.04■□□□□ 0.96
MAP1LC3B-206ENST00000564844 ARCQ7LC44 396 aa21.04■□□□□ 0.96
MAP1LC3B-206ENST00000564844 TRIML2Q8N7C3 387 aa21.04■□□□□ 0.96
MAP1LC3B-206ENST00000564844 SLC4A11Q8NBS3 891 aa21.04■□□□□ 0.96
MAP1LC3B-206ENST00000564844 SNRNP25Q9BV90 132 aaKnown RBP21.04■□□□□ 0.96
MAP1LC3B-206ENST00000564844 PRDM16Q9HAZ2 1276 aa21.04■□□□□ 0.96
MAP1LC3B-206ENST00000564844 COPG2Q9UBF2 871 aa21.04■□□□□ 0.96
MAP1LC3B-206ENST00000564844 SUPT3HO75486 399 aa21.03■□□□□ 0.96
MAP1LC3B-206ENST00000564844 P4HA1P13674 534 aa21.03■□□□□ 0.96
MAP1LC3B-206ENST00000564844 CPA3P15088 417 aa21.03■□□□□ 0.96
MAP1LC3B-206ENST00000564844 MPSTP25325 297 aa21.03■□□□□ 0.96
MAP1LC3B-206ENST00000564844 MAGEA10P43363 369 aaPredicted RBP21.03■□□□□ 0.96
MAP1LC3B-206ENST00000564844 PTPN11Q06124 597 aaPredicted RBP21.03■□□□□ 0.96
MAP1LC3B-206ENST00000564844 PPIDQ08752 370 aaKnown RBP21.03■□□□□ 0.96
MAP1LC3B-206ENST00000564844 IL31Q6EBC2 164 aa21.03■□□□□ 0.96
MAP1LC3B-206ENST00000564844 WDR49Q8IV35 697 aa21.03■□□□□ 0.96
MAP1LC3B-206ENST00000564844 RIN3Q8TB24 985 aa21.03■□□□□ 0.96
MAP1LC3B-206ENST00000564844 ERLEC1Q96DZ1 483 aa21.03■□□□□ 0.96
MAP1LC3B-206ENST00000564844 SENP6Q9GZR1 1112 aaPredicted RBP21.03■□□□□ 0.96
MAP1LC3B-206ENST00000564844 PCDH18Q9HCL0 1135 aa21.03■□□□□ 0.96
MAP1LC3B-206ENST00000564844 ARHGEF38Q9NXL2 777 aa21.03■□□□□ 0.96
MAP1LC3B-206ENST00000564844 PCDHGC3Q9UN70 934 aa21.03■□□□□ 0.96
MAP1LC3B-206ENST00000564844 PSMD13Q9UNM6 376 aa21.03■□□□□ 0.96
MAP1LC3B-206ENST00000564844 FBXO21O94952 628 aa21.03■□□□□ 0.96
MAP1LC3B-206ENST00000564844 TSHRP16473 764 aa21.03■□□□□ 0.96
MAP1LC3B-206ENST00000564844 RARS2Q5T160 578 aaKnown RBP21.03■□□□□ 0.96
MAP1LC3B-206ENST00000564844 OGFRL1Q5TC84 451 aaPredicted RBP21.03■□□□□ 0.96
MAP1LC3B-206ENST00000564844 LRRC8BQ6P9F7 803 aa21.03■□□□□ 0.96
MAP1LC3B-206ENST00000564844 DSELQ8IZU8 1212 aa21.03■□□□□ 0.96
MAP1LC3B-206ENST00000564844 PYROXD2Q8N2H3 581 aa21.03■□□□□ 0.96
MAP1LC3B-206ENST00000564844 JADE3Q92613 823 aa21.03■□□□□ 0.96
MAP1LC3B-206ENST00000564844 DCUN1D5Q9BTE7 237 aa21.03■□□□□ 0.96
MAP1LC3B-206ENST00000564844 PCDHA11Q9Y5I1 949 aa21.03■□□□□ 0.96
MAP1LC3B-206ENST00000564844 TNNC2P02585 160 aa21.03■□□□□ 0.96
MAP1LC3B-206ENST00000564844 OATP04181 439 aa21.03■□□□□ 0.96
MAP1LC3B-206ENST00000564844 PRKCGP05129 697 aa21.03■□□□□ 0.96
MAP1LC3B-206ENST00000564844 NFICP08651 508 aa21.03■□□□□ 0.96
MAP1LC3B-206ENST00000564844 ACBD5Q5T8D3 534 aaPredicted RBP21.03■□□□□ 0.96
MAP1LC3B-206ENST00000564844 MAP1SQ66K74 1059 aaPredicted RBP21.03■□□□□ 0.96
MAP1LC3B-206ENST00000564844 PPP1R2P3Q6NXS1 205 aa21.03■□□□□ 0.96
MAP1LC3B-206ENST00000564844 SPATA6LQ8N4H0 392 aa21.03■□□□□ 0.96
MAP1LC3B-206ENST00000564844 KCNK16Q96T55 309 aa21.03■□□□□ 0.96
MAP1LC3B-206ENST00000564844 NPAS2Q99743 824 aa21.03■□□□□ 0.96
MAP1LC3B-206ENST00000564844 ZNF195O14628 629 aa21.02■□□□□ 0.96
MAP1LC3B-206ENST00000564844 ZSCAN9O15535 394 aaPredicted RBP21.02■□□□□ 0.96
MAP1LC3B-206ENST00000564844 SUPT20HL2P0C7V6 817 aa21.02■□□□□ 0.96
MAP1LC3B-206ENST00000564844 ZNF143P52747 638 aaPredicted RBP21.02■□□□□ 0.96
MAP1LC3B-206ENST00000564844 SUPT20HL1Q3ZLR7 823 aa21.02■□□□□ 0.96
MAP1LC3B-206ENST00000564844 AGAP2Q99490 1192 aa21.02■□□□□ 0.96
MAP1LC3B-206ENST00000564844 H0YCG3 227 aa21.02■□□□□ 0.96
MAP1LC3B-206ENST00000564844 NPM3O75607 178 aaKnown RBP21.02■□□□□ 0.96
MAP1LC3B-206ENST00000564844 CYP2F1P24903 491 aa21.02■□□□□ 0.96
MAP1LC3B-206ENST00000564844 HMGCS2P54868 508 aa21.02■□□□□ 0.96
MAP1LC3B-206ENST00000564844 PRAMEP78395 509 aa21.02■□□□□ 0.96
MAP1LC3B-206ENST00000564844 PCDH20Q8N6Y1 951 aaKnown RBP21.02■□□□□ 0.96
MAP1LC3B-206ENST00000564844 ACVR1CQ8NER5 493 aa21.02■□□□□ 0.96
MAP1LC3B-206ENST00000564844 APOL2Q9BQE5 337 aa21.02■□□□□ 0.96
MAP1LC3B-206ENST00000564844 PCDHAC1Q9H158 963 aa21.02■□□□□ 0.96
MAP1LC3B-206ENST00000564844 TMPRSS4Q9NRS4 437 aa21.02■□□□□ 0.96
MAP1LC3B-206ENST00000564844 ADA2Q9NZK5 511 aa21.02■□□□□ 0.96
MAP1LC3B-206ENST00000564844 GLRA3O75311 464 aa21.01■□□□□ 0.95
MAP1LC3B-206ENST00000564844 JUNP05412 331 aaKnown RBP21.01■□□□□ 0.95
MAP1LC3B-206ENST00000564844 CNTN2Q02246 1040 aa21.01■□□□□ 0.95
MAP1LC3B-206ENST00000564844 CCDC14Q49A88 953 aa21.01■□□□□ 0.95
MAP1LC3B-206ENST00000564844 MYO1HQ8N1T3 1032 aa21.01■□□□□ 0.95
MAP1LC3B-206ENST00000564844 TDRD5Q8NAT2 981 aaKnown RBP21.01■□□□□ 0.95
MAP1LC3B-206ENST00000564844 CCNYQ8ND76 341 aa21.01■□□□□ 0.95
MAP1LC3B-206ENST00000564844 ATP6V1E2Q96A05 226 aa21.01■□□□□ 0.95
MAP1LC3B-206ENST00000564844 EME1Q96AY2 570 aa21.01■□□□□ 0.95
MAP1LC3B-206ENST00000564844 CNPY3Q9BT09 278 aa21.01■□□□□ 0.95
MAP1LC3B-206ENST00000564844 TCF7L2Q9NQB0 619 aa21.01■□□□□ 0.95
MAP1LC3B-206ENST00000564844 LOXHD1Q8IVV2 1947 aa21.01■□□□□ 0.95
MAP1LC3B-206ENST00000564844 TMX2-CTNND1H3BSU7 103 aa21.01■□□□□ 0.95
MAP1LC3B-206ENST00000564844 BOLA2-SMG1P6H3BVE0 249 aa21.01■□□□□ 0.95
MAP1LC3B-206ENST00000564844 TRMUO75648 421 aaKnown RBP21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms