RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 MAN2A1Q16706 1144 aa19.22■□□□□ 0.67
CLN6-204ENST00000564752 PTPRNQ16849 979 aa19.22■□□□□ 0.67
CLN6-204ENST00000564752 FNDC3BQ53EP0 1204 aaKnown RBP19.22■□□□□ 0.67
CLN6-204ENST00000564752 PIK3R6Q5UE93 754 aa19.22■□□□□ 0.67
CLN6-204ENST00000564752 NUGGCQ68CJ6 796 aa19.22■□□□□ 0.67
CLN6-204ENST00000564752 GJB7Q6PEY0 223 aa19.22■□□□□ 0.67
CLN6-204ENST00000564752 GATA6Q92908 595 aa19.22■□□□□ 0.67
CLN6-204ENST00000564752 AZIN2Q96A70 460 aa19.22■□□□□ 0.67
CLN6-204ENST00000564752 APEX2Q9UBZ4 518 aa19.22■□□□□ 0.67
CLN6-204ENST00000564752 GGA2Q9UJY4 613 aa19.22■□□□□ 0.67
CLN6-204ENST00000564752 NEUROG3Q9Y4Z2 214 aa19.22■□□□□ 0.67
CLN6-204ENST00000564752 WDFY3Q8IZQ1 3526 aa19.21■□□□□ 0.67
CLN6-204ENST00000564752 H0Y626 953 aa19.21■□□□□ 0.67
CLN6-204ENST00000564752 GOLGA6L22H0YM25 854 aa19.21■□□□□ 0.67
CLN6-204ENST00000564752 MED7O43513 233 aa19.21■□□□□ 0.67
CLN6-204ENST00000564752 SH3BP5O60239 455 aa19.21■□□□□ 0.67
CLN6-204ENST00000564752 ACSL4O60488 711 aa19.21■□□□□ 0.67
CLN6-204ENST00000564752 FBXO21O94952 628 aa19.21■□□□□ 0.67
CLN6-204ENST00000564752 TRIM16O95361 564 aa19.21■□□□□ 0.67
CLN6-204ENST00000564752 IGF2RP11717 2491 aa19.21■□□□□ 0.67
CLN6-204ENST00000564752 PABPC1P11940 636 aaKnown RBP19.21■□□□□ 0.67
CLN6-204ENST00000564752 SLC11A2P49281 568 aa19.21■□□□□ 0.67
CLN6-204ENST00000564752 RING1Q06587 406 aa19.21■□□□□ 0.67
CLN6-204ENST00000564752 ARHGAP44Q17R89 818 aa19.21■□□□□ 0.67
CLN6-204ENST00000564752 FAM133BQ5BKY9 247 aaKnown RBP19.21■□□□□ 0.67
CLN6-204ENST00000564752 MBLAC2Q68D91 279 aa19.21■□□□□ 0.67
CLN6-204ENST00000564752 RFWD3Q6PCD5 774 aa19.21■□□□□ 0.67
CLN6-204ENST00000564752 CACUL1Q86Y37 369 aa19.21■□□□□ 0.67
CLN6-204ENST00000564752 AHI1Q8N157 1196 aa19.21■□□□□ 0.67
CLN6-204ENST00000564752 ZCCHC9Q8N567 271 aaKnown RBP19.21■□□□□ 0.67
CLN6-204ENST00000564752 GOLGA1Q92805 767 aa19.21■□□□□ 0.67
CLN6-204ENST00000564752 MIR1-1HGQ9H1L0 117 aa19.21■□□□□ 0.67
CLN6-204ENST00000564752 PCED1AQ9H1Q7 454 aa19.21■□□□□ 0.67
CLN6-204ENST00000564752 ZMIZ1Q9ULJ6 1067 aa19.21■□□□□ 0.67
CLN6-204ENST00000564752 AKAP13Q12802 2813 aa19.21■□□□□ 0.67
CLN6-204ENST00000564752 CACNA1GO43497 2377 aa19.2■□□□□ 0.66
CLN6-204ENST00000564752 ADAMTS9Q9P2N4 1935 aa19.2■□□□□ 0.66
CLN6-204ENST00000564752 BCAT2O15382 392 aaPredicted RBP19.2■□□□□ 0.66
CLN6-204ENST00000564752 IRAK2O43187 625 aa19.2■□□□□ 0.66
CLN6-204ENST00000564752 THAP12O43422 761 aa19.2■□□□□ 0.66
CLN6-204ENST00000564752 TBL1XO60907 577 aa19.2■□□□□ 0.66
CLN6-204ENST00000564752 LETM1O95202 739 aaPredicted RBP19.2■□□□□ 0.66
CLN6-204ENST00000564752 FYNP06241 537 aa19.2■□□□□ 0.66
CLN6-204ENST00000564752 ATP5BP06576 529 aaKnown RBP19.2■□□□□ 0.66
CLN6-204ENST00000564752 DLDP09622 509 aaKnown RBP19.2■□□□□ 0.66
CLN6-204ENST00000564752 PRKCSHP14314 528 aaPredicted RBP19.2■□□□□ 0.66
CLN6-204ENST00000564752 GNA15P30679 374 aa19.2■□□□□ 0.66
CLN6-204ENST00000564752 SLC6A4P31645 630 aa19.2■□□□□ 0.66
CLN6-204ENST00000564752 RDXP35241 583 aaKnown RBP19.2■□□□□ 0.66
CLN6-204ENST00000564752 USP8P40818 1118 aa19.2■□□□□ 0.66
CLN6-204ENST00000564752 RPL34P49207 117 aaKnown RBP19.2■□□□□ 0.66
CLN6-204ENST00000564752 TBX4P57082 545 aa19.2■□□□□ 0.66
CLN6-204ENST00000564752 HSP90AA4PQ58FG1 418 aa19.2■□□□□ 0.66
CLN6-204ENST00000564752 FAM124AQ86V42 546 aa19.2■□□□□ 0.66
CLN6-204ENST00000564752 ZNF366Q8N895 744 aa19.2■□□□□ 0.66
CLN6-204ENST00000564752 C1orf216Q8TAB5 229 aa19.2■□□□□ 0.66
CLN6-204ENST00000564752 WFDC5Q8TCV5 224 aa19.2■□□□□ 0.66
CLN6-204ENST00000564752 LMLNQ96KR4 655 aa19.2■□□□□ 0.66
CLN6-204ENST00000564752 CAMK1GQ96NX5 476 aa19.2■□□□□ 0.66
CLN6-204ENST00000564752 LHX5Q9H2C1 402 aa19.2■□□□□ 0.66
CLN6-204ENST00000564752 PRSS16Q9NQE7 514 aa19.2■□□□□ 0.66
CLN6-204ENST00000564752 ST7Q9NRC1 585 aa19.2■□□□□ 0.66
CLN6-204ENST00000564752 MSRB2Q9Y3D2 182 aa19.2■□□□□ 0.66
CLN6-204ENST00000564752 FAM221BA6H8Z2 402 aa19.19■□□□□ 0.66
CLN6-204ENST00000564752 TMEM8BA6NDV4 472 aa19.19■□□□□ 0.66
CLN6-204ENST00000564752 PON1P27169 355 aa19.19■□□□□ 0.66
CLN6-204ENST00000564752 CD70P32970 193 aa19.19■□□□□ 0.66
CLN6-204ENST00000564752 GPD2P43304 727 aa19.19■□□□□ 0.66
CLN6-204ENST00000564752 APBA1Q02410 837 aa19.19■□□□□ 0.66
CLN6-204ENST00000564752 TRIP6Q15654 476 aaKnown RBP19.19■□□□□ 0.66
CLN6-204ENST00000564752 MEA1Q16626 185 aa19.19■□□□□ 0.66
CLN6-204ENST00000564752 CT47A1Q5JQC4 288 aaPredicted RBP19.19■□□□□ 0.66
CLN6-204ENST00000564752 NADSYN1Q6IA69 706 aa19.19■□□□□ 0.66
CLN6-204ENST00000564752 SCUBE3Q8IX30 993 aa19.19■□□□□ 0.66
CLN6-204ENST00000564752 GPT2Q8TD30 523 aa19.19■□□□□ 0.66
CLN6-204ENST00000564752 FCRL2Q96LA5 508 aaPredicted RBP19.19■□□□□ 0.66
CLN6-204ENST00000564752 TUBGCP2Q9BSJ2 902 aa19.19■□□□□ 0.66
CLN6-204ENST00000564752 MIS12Q9H081 205 aa19.19■□□□□ 0.66
CLN6-204ENST00000564752 NDST4Q9H3R1 872 aa19.19■□□□□ 0.66
CLN6-204ENST00000564752 FBRSQ9HAH7 460 aa19.19■□□□□ 0.66
CLN6-204ENST00000564752 SUN2Q9UH99 717 aa19.19■□□□□ 0.66
CLN6-204ENST00000564752 EIF2B4Q9UI10 523 aaKnown RBP19.19■□□□□ 0.66
CLN6-204ENST00000564752 KLK13Q9UKR3 277 aa19.19■□□□□ 0.66
CLN6-204ENST00000564752 FAM208BQ5VWN6 2430 aa19.19■□□□□ 0.66
CLN6-204ENST00000564752 SPEGQ15772 3267 aa19.18■□□□□ 0.66
CLN6-204ENST00000564752 PES1O00541 588 aaKnown RBP19.18■□□□□ 0.66
CLN6-204ENST00000564752 POLR2EP19388 210 aaKnown RBP19.18■□□□□ 0.66
CLN6-204ENST00000564752 ACSL1P33121 698 aa19.18■□□□□ 0.66
CLN6-204ENST00000564752 BNC1Q01954 994 aa19.18■□□□□ 0.66
CLN6-204ENST00000564752 ZBTB16Q05516 673 aa19.18■□□□□ 0.66
CLN6-204ENST00000564752 ZNF423Q2M1K9 1284 aa19.18■□□□□ 0.66
CLN6-204ENST00000564752 VWA3BQ502W6 1294 aa19.18■□□□□ 0.66
CLN6-204ENST00000564752 DENND1BQ6P3S1 775 aa19.18■□□□□ 0.66
CLN6-204ENST00000564752 NAXDQ8IW45 347 aa19.18■□□□□ 0.66
CLN6-204ENST00000564752 ZNF557Q8N988 423 aaPredicted RBP19.18■□□□□ 0.66
CLN6-204ENST00000564752 FIBINQ8TAL6 211 aa19.18■□□□□ 0.66
CLN6-204ENST00000564752 DQX1Q8TE96 717 aaKnown RBP19.18■□□□□ 0.66
CLN6-204ENST00000564752 SHC3Q92529 594 aa19.18■□□□□ 0.66
CLN6-204ENST00000564752 TTC17Q96AE7 1141 aa19.18■□□□□ 0.66
CLN6-204ENST00000564752 DDX50Q9BQ39 737 aaKnown RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms