RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 TMEM109Q9BVC6 243 aa16.04■□□□□ 0.16
COMMD4-210ENST00000564587 MAGEB5Q9BZ81 275 aa16.04■□□□□ 0.16
COMMD4-210ENST00000564587 ROPN1BQ9BZX4 212 aaPredicted RBP16.04■□□□□ 0.16
COMMD4-210ENST00000564587 RETREG1Q9H6L5 497 aa16.04■□□□□ 0.16
COMMD4-210ENST00000564587 ROPN1Q9HAT0 212 aaPredicted RBP16.04■□□□□ 0.16
COMMD4-210ENST00000564587 CYP4F11Q9HBI6 524 aa16.04■□□□□ 0.16
COMMD4-210ENST00000564587 ANLNQ9NQW6 1124 aa16.04■□□□□ 0.16
COMMD4-210ENST00000564587 TMPRSS4Q9NRS4 437 aa16.04■□□□□ 0.16
COMMD4-210ENST00000564587 ETNK2Q9NVF9 386 aa16.04■□□□□ 0.16
COMMD4-210ENST00000564587 OSER1Q9NX31 292 aa16.04■□□□□ 0.16
COMMD4-210ENST00000564587 NFS1Q9Y697 457 aa16.04■□□□□ 0.16
COMMD4-210ENST00000564587 DNAH12Q6ZR08 3092 aa16.04■□□□□ 0.16
COMMD4-210ENST00000564587 CLUHO75153 1309 aa16.03■□□□□ 0.16
COMMD4-210ENST00000564587 FAM72CH0Y354 149 aa16.03■□□□□ 0.16
COMMD4-210ENST00000564587 H3BQF6 201 aa16.03■□□□□ 0.16
COMMD4-210ENST00000564587 MFSD11O43934 449 aa16.03■□□□□ 0.16
COMMD4-210ENST00000564587 OPHN1O60890 802 aa16.03■□□□□ 0.16
COMMD4-210ENST00000564587 SOAT2O75908 522 aa16.03■□□□□ 0.16
COMMD4-210ENST00000564587 TTC4O95801 387 aa16.03■□□□□ 0.16
COMMD4-210ENST00000564587 TSHRP16473 764 aa16.03■□□□□ 0.16
COMMD4-210ENST00000564587 RPL17P18621 184 aaKnown RBP16.03■□□□□ 0.16
COMMD4-210ENST00000564587 MAGEA6P43360 314 aa16.03■□□□□ 0.16
COMMD4-210ENST00000564587 TUBP50607 506 aa16.03■□□□□ 0.16
COMMD4-210ENST00000564587 EFEMP1Q12805 493 aa16.03■□□□□ 0.16
COMMD4-210ENST00000564587 FAM72AQ5TYM5 149 aa16.03■□□□□ 0.16
COMMD4-210ENST00000564587 RASIP1Q5U651 963 aa16.03■□□□□ 0.16
COMMD4-210ENST00000564587 MANEALQ5VSG8 457 aa16.03■□□□□ 0.16
COMMD4-210ENST00000564587 NUGGCQ68CJ6 796 aa16.03■□□□□ 0.16
COMMD4-210ENST00000564587 FAM72DQ6L9T8 149 aa16.03■□□□□ 0.16
COMMD4-210ENST00000564587 LRRC31Q6UY01 552 aa16.03■□□□□ 0.16
COMMD4-210ENST00000564587 PRUNE1Q86TP1 453 aa16.03■□□□□ 0.16
COMMD4-210ENST00000564587 ITIH5Q86UX2 942 aa16.03■□□□□ 0.16
COMMD4-210ENST00000564587 FAM72BQ86X60 149 aa16.03■□□□□ 0.16
COMMD4-210ENST00000564587 PDIK1LQ8N165 341 aa16.03■□□□□ 0.16
COMMD4-210ENST00000564587 SP7Q8TDD2 431 aaPredicted RBP16.03■□□□□ 0.16
COMMD4-210ENST00000564587 CPT1BQ92523 772 aa16.03■□□□□ 0.16
COMMD4-210ENST00000564587 EXOC4Q96A65 974 aa16.03■□□□□ 0.16
COMMD4-210ENST00000564587 BTN2A3PQ96KV6 586 aa16.03■□□□□ 0.16
COMMD4-210ENST00000564587 FCRL2Q96LA5 508 aaPredicted RBP16.03■□□□□ 0.16
COMMD4-210ENST00000564587 VAT1Q99536 393 aa16.03■□□□□ 0.16
COMMD4-210ENST00000564587 CCDC77Q9BR77 488 aa16.03■□□□□ 0.16
COMMD4-210ENST00000564587 HTATIP2Q9BUP3 242 aa16.03■□□□□ 0.16
COMMD4-210ENST00000564587 ZBP1Q9H171 429 aa16.03■□□□□ 0.16
COMMD4-210ENST00000564587 CDC42EP4Q9H3Q1 356 aaKnown RBP16.03■□□□□ 0.16
COMMD4-210ENST00000564587 SEMA4AQ9H3S1 761 aa16.03■□□□□ 0.16
COMMD4-210ENST00000564587 TRPM5Q9NZQ8 1165 aa16.03■□□□□ 0.16
COMMD4-210ENST00000564587 DNMT3LQ9UJW3 386 aa16.03■□□□□ 0.16
COMMD4-210ENST00000564587 LZTS1Q9Y250 596 aa16.03■□□□□ 0.16
COMMD4-210ENST00000564587 YIPF1Q9Y548 306 aa16.03■□□□□ 0.16
COMMD4-210ENST00000564587 ASB3Q9Y575 518 aa16.03■□□□□ 0.16
COMMD4-210ENST00000564587 SLC4A7Q9Y6M7 1214 aa16.03■□□□□ 0.16
COMMD4-210ENST00000564587 A0A0A0MRY4 1105 aa16.02■□□□□ 0.16
COMMD4-210ENST00000564587 WASH4PA8MWX3 477 aa16.02■□□□□ 0.16
COMMD4-210ENST00000564587 HMGB1P1B2RPK0 211 aaPredicted RBP16.02■□□□□ 0.16
COMMD4-210ENST00000564587 I6L893 689 aaPredicted RBP16.02■□□□□ 0.16
COMMD4-210ENST00000564587 PRRG1O14668 218 aa16.02■□□□□ 0.16
COMMD4-210ENST00000564587 ALOX15BO15296 676 aa16.02■□□□□ 0.16
COMMD4-210ENST00000564587 TLR5O60602 858 aa16.02■□□□□ 0.16
COMMD4-210ENST00000564587 LILRB3O75022 631 aa16.02■□□□□ 0.16
COMMD4-210ENST00000564587 RNF40O75150 1001 aa16.02■□□□□ 0.16
COMMD4-210ENST00000564587 ABHD2P08910 425 aa16.02■□□□□ 0.16
COMMD4-210ENST00000564587 CHKAP35790 457 aa16.02■□□□□ 0.16
COMMD4-210ENST00000564587 ATP5C1P36542 298 aaKnown RBP16.02■□□□□ 0.16
COMMD4-210ENST00000564587 MAGEA4P43358 317 aa16.02■□□□□ 0.16
COMMD4-210ENST00000564587 PGFP49763 221 aa16.02■□□□□ 0.16
COMMD4-210ENST00000564587 EPHB3P54753 998 aa16.02■□□□□ 0.16
COMMD4-210ENST00000564587 BASP1P80723 227 aaKnown RBP16.02■□□□□ 0.16
COMMD4-210ENST00000564587 SARNPP82979 210 aaKnown RBP16.02■□□□□ 0.16
COMMD4-210ENST00000564587 CBX1P83916 185 aa16.02■□□□□ 0.16
COMMD4-210ENST00000564587 CDK16Q00536 496 aa16.02■□□□□ 0.16
COMMD4-210ENST00000564587 PPIDQ08752 370 aaKnown RBP16.02■□□□□ 0.16
COMMD4-210ENST00000564587 GALNT2Q10471 571 aa16.02■□□□□ 0.16
COMMD4-210ENST00000564587 SLC29A2Q14542 456 aa16.02■□□□□ 0.16
COMMD4-210ENST00000564587 HIF1AQ16665 826 aa16.02■□□□□ 0.16
COMMD4-210ENST00000564587 HECTD3Q5T447 861 aa16.02■□□□□ 0.16
COMMD4-210ENST00000564587 AGBL2Q5U5Z8 902 aa16.02■□□□□ 0.16
COMMD4-210ENST00000564587 ARHGEF18Q6ZSZ5 1173 aa16.02■□□□□ 0.16
COMMD4-210ENST00000564587 TMCO2Q7Z6W1 182 aaPredicted RBP16.02■□□□□ 0.16
COMMD4-210ENST00000564587 HERC6Q8IVU3 1022 aa16.02■□□□□ 0.16
COMMD4-210ENST00000564587 MCUQ8NE86 351 aa16.02■□□□□ 0.16
COMMD4-210ENST00000564587 GPR152Q8TDT2 470 aa16.02■□□□□ 0.16
COMMD4-210ENST00000564587 HDAC11Q96DB2 347 aa16.02■□□□□ 0.16
COMMD4-210ENST00000564587 ZNF512Q96ME7 567 aaPredicted RBP16.02■□□□□ 0.16
COMMD4-210ENST00000564587 SPATA13Q96N96 652 aa16.02■□□□□ 0.16
COMMD4-210ENST00000564587 SIK2Q9H0K1 926 aa16.02■□□□□ 0.16
COMMD4-210ENST00000564587 STMN4Q9H169 189 aaPredicted RBP16.02■□□□□ 0.16
COMMD4-210ENST00000564587 PRDM12Q9H4Q4 367 aa16.02■□□□□ 0.16
COMMD4-210ENST00000564587 C10orf88Q9H8K7 445 aa16.02■□□□□ 0.16
COMMD4-210ENST00000564587 TMBIM4Q9HC24 238 aa16.02■□□□□ 0.16
COMMD4-210ENST00000564587 PPARGC1AQ9UBK2 798 aaKnown RBP16.02■□□□□ 0.16
COMMD4-210ENST00000564587 MAGED2Q9UNF1 606 aaPredicted RBP16.02■□□□□ 0.16
COMMD4-210ENST00000564587 COLQQ9Y215 455 aaPredicted RBP16.02■□□□□ 0.16
COMMD4-210ENST00000564587 KIAA1671Q9BY89 1806 aa16.01■□□□□ 0.15
COMMD4-210ENST00000564587 SLC12A8A0AV02 714 aa16.01■□□□□ 0.15
COMMD4-210ENST00000564587 MSI1O43347 362 aaKnown RBP16.01■□□□□ 0.15
COMMD4-210ENST00000564587 SEC24AO95486 1093 aa16.01■□□□□ 0.15
COMMD4-210ENST00000564587 IGLV3-27P01718 113 aa16.01■□□□□ 0.15
COMMD4-210ENST00000564587 IVLP07476 585 aa16.01■□□□□ 0.15
COMMD4-210ENST00000564587 TPSB2P20231 275 aa16.01■□□□□ 0.15
COMMD4-210ENST00000564587 ZNF844Q08AG5 666 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms