RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 GGA2Q9UJY4 613 aa10.82□□□□□ -0.68
SF3B3-204ENST00000563739 AK5Q9Y6K8 562 aa10.82□□□□□ -0.68
SF3B3-204ENST00000563739 U3KQA8 63 aa10.82□□□□□ -0.68
SF3B3-204ENST00000563739 DOPEY2Q9Y3R5 2298 aa10.82□□□□□ -0.68
SF3B3-204ENST00000563739 TDRD6O60522 2096 aaKnown RBP10.81□□□□□ -0.68
SF3B3-204ENST00000563739 MYO9AB2RTY4 2548 aa10.81□□□□□ -0.68
SF3B3-204ENST00000563739 A0A1W2PP55 124 aa10.81□□□□□ -0.68
SF3B3-204ENST00000563739 VPS37CA5D8V6 355 aaPredicted RBP10.81□□□□□ -0.68
SF3B3-204ENST00000563739 TRIM38O00635 465 aa10.81□□□□□ -0.68
SF3B3-204ENST00000563739 MID1O15344 667 aa10.81□□□□□ -0.68
SF3B3-204ENST00000563739 MSI1O43347 362 aaKnown RBP10.81□□□□□ -0.68
SF3B3-204ENST00000563739 LATO43561 262 aa10.81□□□□□ -0.68
SF3B3-204ENST00000563739 SIN3BO75182 1162 aa10.81□□□□□ -0.68
SF3B3-204ENST00000563739 DLDP09622 509 aaKnown RBP10.81□□□□□ -0.68
SF3B3-204ENST00000563739 PABPC1P11940 636 aaKnown RBP10.81□□□□□ -0.68
SF3B3-204ENST00000563739 DRD3P35462 400 aa10.81□□□□□ -0.68
SF3B3-204ENST00000563739 RXRGP48443 463 aa10.81□□□□□ -0.68
SF3B3-204ENST00000563739 PSEN1P49768 467 aa10.81□□□□□ -0.68
SF3B3-204ENST00000563739 SNRPFP62306 86 aaKnown RBP10.81□□□□□ -0.68
SF3B3-204ENST00000563739 COG7P83436 770 aa10.81□□□□□ -0.68
SF3B3-204ENST00000563739 SKOR1P84550 965 aa10.81□□□□□ -0.68
SF3B3-204ENST00000563739 SRSF1Q07955 248 aaKnown RBP eCLIP10.81□□□□□ -0.68
SF3B3-204ENST00000563739 KCNH2Q12809 1159 aa10.81□□□□□ -0.68
SF3B3-204ENST00000563739 C9orf64Q5T6V5 341 aa10.81□□□□□ -0.68
SF3B3-204ENST00000563739 ZNF776Q68DI1 518 aaPredicted RBP10.81□□□□□ -0.68
SF3B3-204ENST00000563739 PM20D1Q6GTS8 502 aa10.81□□□□□ -0.68
SF3B3-204ENST00000563739 NADSYN1Q6IA69 706 aa10.81□□□□□ -0.68
SF3B3-204ENST00000563739 LRRC69Q6ZNQ3 347 aa10.81□□□□□ -0.68
SF3B3-204ENST00000563739 USP30Q70CQ3 517 aa10.81□□□□□ -0.68
SF3B3-204ENST00000563739 UNC13DQ70J99 1090 aa10.81□□□□□ -0.68
SF3B3-204ENST00000563739 PIGZQ86VD9 579 aa10.81□□□□□ -0.68
SF3B3-204ENST00000563739 FAM181AQ8N9Y4 354 aa10.81□□□□□ -0.68
SF3B3-204ENST00000563739 TAS1R2Q8TE23 839 aa10.81□□□□□ -0.68
SF3B3-204ENST00000563739 WFIKKN2Q8TEU8 576 aa10.81□□□□□ -0.68
SF3B3-204ENST00000563739 DDI1Q8WTU0 396 aa10.81□□□□□ -0.68
SF3B3-204ENST00000563739 PLD4Q96BZ4 506 aa10.81□□□□□ -0.68
SF3B3-204ENST00000563739 WBP1Q96G27 269 aa10.81□□□□□ -0.68
SF3B3-204ENST00000563739 FAM129BQ96TA1 746 aa10.81□□□□□ -0.68
SF3B3-204ENST00000563739 ACE2Q9BYF1 805 aaPredicted RBP10.81□□□□□ -0.68
SF3B3-204ENST00000563739 DCLK3Q9C098 648 aa10.81□□□□□ -0.68
SF3B3-204ENST00000563739 NEUROG2Q9H2A3 272 aa10.81□□□□□ -0.68
SF3B3-204ENST00000563739 BLZF1Q9H2G9 400 aa10.81□□□□□ -0.68
SF3B3-204ENST00000563739 FBRSQ9HAH7 460 aa10.81□□□□□ -0.68
SF3B3-204ENST00000563739 SLC39A2Q9NP94 309 aa10.81□□□□□ -0.68
SF3B3-204ENST00000563739 ARHGAP20Q9P2F6 1191 aa10.81□□□□□ -0.68
SF3B3-204ENST00000563739 GOLGA6L7A0A1B0GV03 622 aa10.8□□□□□ -0.68
SF3B3-204ENST00000563739 PMS2P1A4D2B8 440 aa10.8□□□□□ -0.68
SF3B3-204ENST00000563739 RRP8O43159 456 aaKnown RBP10.8□□□□□ -0.68
SF3B3-204ENST00000563739 DFNA5O60443 496 aa10.8□□□□□ -0.68
SF3B3-204ENST00000563739 EXOC3O60645 756 aa10.8□□□□□ -0.68
SF3B3-204ENST00000563739 PHACTR2O75167 634 aa10.8□□□□□ -0.68
SF3B3-204ENST00000563739 DXOO77932 396 aaKnown RBP10.8□□□□□ -0.68
SF3B3-204ENST00000563739 IGLV3-27P01718 113 aa10.8□□□□□ -0.68
SF3B3-204ENST00000563739 DNTTP04053 509 aa10.8□□□□□ -0.68
SF3B3-204ENST00000563739 ITGAVP06756 1048 aa10.8□□□□□ -0.68
SF3B3-204ENST00000563739 GLDCP23378 1020 aa10.8□□□□□ -0.68
SF3B3-204ENST00000563739 ACP1P24666 158 aa10.8□□□□□ -0.68
SF3B3-204ENST00000563739 CD38P28907 300 aa10.8□□□□□ -0.68
SF3B3-204ENST00000563739 TXLNAP40222 546 aa10.8□□□□□ -0.68
SF3B3-204ENST00000563739 CTSOP43234 321 aaPredicted RBP10.8□□□□□ -0.68
SF3B3-204ENST00000563739 ADPRHP54922 357 aa10.8□□□□□ -0.68
SF3B3-204ENST00000563739 YWHAGP61981 247 aaKnown RBP eCLIP10.8□□□□□ -0.68
SF3B3-204ENST00000563739 PPP3CAQ08209 521 aa10.8□□□□□ -0.68
SF3B3-204ENST00000563739 KNOP1Q1ED39 458 aaKnown RBP10.8□□□□□ -0.68
SF3B3-204ENST00000563739 INAVAQ3KP66 663 aa10.8□□□□□ -0.68
SF3B3-204ENST00000563739 MPPE1Q53F39 396 aa10.8□□□□□ -0.68
SF3B3-204ENST00000563739 RFWD3Q6PCD5 774 aa10.8□□□□□ -0.68
SF3B3-204ENST00000563739 STXBP4Q6ZWJ1 553 aa10.8□□□□□ -0.68
SF3B3-204ENST00000563739 SLC9A9Q8IVB4 645 aa10.8□□□□□ -0.68
SF3B3-204ENST00000563739 GRAMD1CQ8IYS0 662 aa10.8□□□□□ -0.68
SF3B3-204ENST00000563739 AHI1Q8N157 1196 aa10.8□□□□□ -0.68
SF3B3-204ENST00000563739 SLC4A11Q8NBS3 891 aa10.8□□□□□ -0.68
SF3B3-204ENST00000563739 LINC00301Q8NCQ3 95 aa10.8□□□□□ -0.68
SF3B3-204ENST00000563739 BAP1Q92560 729 aa10.8□□□□□ -0.68
SF3B3-204ENST00000563739 TTC17Q96AE7 1141 aa10.8□□□□□ -0.68
SF3B3-204ENST00000563739 DHX58Q96C10 678 aa10.8□□□□□ -0.68
SF3B3-204ENST00000563739 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.8□□□□□ -0.68
SF3B3-204ENST00000563739 ULBP1Q9BZM6 244 aa10.8□□□□□ -0.68
SF3B3-204ENST00000563739 TFIP11Q9UBB9 837 aaKnown RBP10.8□□□□□ -0.68
SF3B3-204ENST00000563739 SFMBT1Q9UHJ3 866 aa10.8□□□□□ -0.68
SF3B3-204ENST00000563739 MTMR6Q9Y217 621 aa10.8□□□□□ -0.68
SF3B3-204ENST00000563739 ITIH6Q6UXX5 1313 aa10.8□□□□□ -0.68
SF3B3-204ENST00000563739 B8ZZF3 427 aa10.79□□□□□ -0.68
SF3B3-204ENST00000563739 CASC3O15234 703 aaKnown RBP10.79□□□□□ -0.68
SF3B3-204ENST00000563739 ARHGAP6O43182 974 aa10.79□□□□□ -0.68
SF3B3-204ENST00000563739 TIMM44O43615 452 aa10.79□□□□□ -0.68
SF3B3-204ENST00000563739 LZTS3O60299 673 aaPredicted RBP10.79□□□□□ -0.68
SF3B3-204ENST00000563739 KRT38O76015 456 aa10.79□□□□□ -0.68
SF3B3-204ENST00000563739 TRIM49P0CI25 452 aa10.79□□□□□ -0.68
SF3B3-204ENST00000563739 TRIM49CP0CI26 452 aa10.79□□□□□ -0.68
SF3B3-204ENST00000563739 RALAP11233 206 aa10.79□□□□□ -0.68
SF3B3-204ENST00000563739 CKMT2P17540 419 aa10.79□□□□□ -0.68
SF3B3-204ENST00000563739 CD58P19256 250 aa10.79□□□□□ -0.68
SF3B3-204ENST00000563739 SYT1P21579 422 aa10.79□□□□□ -0.68
SF3B3-204ENST00000563739 CCR5P51681 352 aa10.79□□□□□ -0.68
SF3B3-204ENST00000563739 AP3M2P53677 418 aa10.79□□□□□ -0.68
SF3B3-204ENST00000563739 C21orf59P57076 290 aa10.79□□□□□ -0.68
SF3B3-204ENST00000563739 STK4Q13043 487 aa10.79□□□□□ -0.68
SF3B3-204ENST00000563739 ILKQ13418 452 aa10.79□□□□□ -0.68
SF3B3-204ENST00000563739 CUL4BQ13620 913 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms