RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 ZNF806P0C7X5 589 aa19.7■□□□□ 0.74
TRADD-203ENST00000563348 CHRNB2P17787 502 aa19.7■□□□□ 0.74
TRADD-203ENST00000563348 NDUFV2P19404 249 aa19.7■□□□□ 0.74
TRADD-203ENST00000563348 ABCB4P21439 1286 aa19.7■□□□□ 0.74
TRADD-203ENST00000563348 TACR2P21452 398 aa19.7■□□□□ 0.74
TRADD-203ENST00000563348 CD70P32970 193 aa19.7■□□□□ 0.74
TRADD-203ENST00000563348 NOMO3P69849 1222 aa19.7■□□□□ 0.74
TRADD-203ENST00000563348 ARID5AQ03989 594 aa19.7■□□□□ 0.74
TRADD-203ENST00000563348 STARD3Q14849 445 aa19.7■□□□□ 0.74
TRADD-203ENST00000563348 KLHL40Q2TBA0 621 aa19.7■□□□□ 0.74
TRADD-203ENST00000563348 PLA2G2CQ5R387 149 aa19.7■□□□□ 0.74
TRADD-203ENST00000563348 RAP1GAP2Q684P5 730 aa19.7■□□□□ 0.74
TRADD-203ENST00000563348 PRR23CQ6ZRP0 262 aa19.7■□□□□ 0.74
TRADD-203ENST00000563348 XYLT1Q86Y38 959 aa19.7■□□□□ 0.74
TRADD-203ENST00000563348 MFN1Q8IWA4 741 aa19.7■□□□□ 0.74
TRADD-203ENST00000563348 LGI2Q8N0V4 545 aa19.7■□□□□ 0.74
TRADD-203ENST00000563348 AHI1Q8N157 1196 aa19.7■□□□□ 0.74
TRADD-203ENST00000563348 CFAP52Q8N1V2 620 aa19.7■□□□□ 0.74
TRADD-203ENST00000563348 MSANTD4Q8NCY6 345 aa19.7■□□□□ 0.74
TRADD-203ENST00000563348 SLC20A1Q8WUM9 679 aa19.7■□□□□ 0.74
TRADD-203ENST00000563348 CPA5Q8WXQ8 436 aa19.7■□□□□ 0.74
TRADD-203ENST00000563348 RNF34Q969K3 372 aa19.7■□□□□ 0.74
TRADD-203ENST00000563348 ERLEC1Q96DZ1 483 aa19.7■□□□□ 0.74
TRADD-203ENST00000563348 MRGPRX1Q96LB2 322 aa19.7■□□□□ 0.74
TRADD-203ENST00000563348 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.7■□□□□ 0.74
TRADD-203ENST00000563348 CALCOCO1Q9P1Z2 691 aa19.7■□□□□ 0.74
TRADD-203ENST00000563348 MBD1Q9UIS9 605 aaPredicted RBP19.7■□□□□ 0.74
TRADD-203ENST00000563348 PLA2G4CQ9UP65 541 aa19.7■□□□□ 0.74
TRADD-203ENST00000563348 CACNA1AO00555 2505 aa19.69■□□□□ 0.74
TRADD-203ENST00000563348 SYNJ2BP-COX16A0A087WUM0 186 aa19.69■□□□□ 0.74
TRADD-203ENST00000563348 BCLAF3A2AJT9 711 aaKnown RBP19.69■□□□□ 0.74
TRADD-203ENST00000563348 ZNF217O75362 1048 aa19.69■□□□□ 0.74
TRADD-203ENST00000563348 CYP1A1P04798 512 aaPredicted RBP19.69■□□□□ 0.74
TRADD-203ENST00000563348 ZNF165P49910 485 aa19.69■□□□□ 0.74
TRADD-203ENST00000563348 RNASE9P60153 205 aaKnown RBP19.69■□□□□ 0.74
TRADD-203ENST00000563348 FMO1Q01740 532 aa19.69■□□□□ 0.74
TRADD-203ENST00000563348 MTA1Q13330 715 aa19.69■□□□□ 0.74
TRADD-203ENST00000563348 RSPO4Q2I0M5 234 aaPredicted RBP19.69■□□□□ 0.74
TRADD-203ENST00000563348 FUT11Q495W5 492 aa19.69■□□□□ 0.74
TRADD-203ENST00000563348 SPDYCQ5MJ68 293 aa19.69■□□□□ 0.74
TRADD-203ENST00000563348 NAA35Q5VZE5 725 aa19.69■□□□□ 0.74
TRADD-203ENST00000563348 MBLAC2Q68D91 279 aa19.69■□□□□ 0.74
TRADD-203ENST00000563348 CHSY1Q86X52 802 aa19.69■□□□□ 0.74
TRADD-203ENST00000563348 CCDC117Q8IWD4 279 aaPredicted RBP19.69■□□□□ 0.74
TRADD-203ENST00000563348 NT5C3BQ969T7 300 aa19.69■□□□□ 0.74
TRADD-203ENST00000563348 NPY6RQ99463 290 aa19.69■□□□□ 0.74
TRADD-203ENST00000563348 PRMT1Q99873 361 aaKnown RBP19.69■□□□□ 0.74
TRADD-203ENST00000563348 FUCA2Q9BTY2 467 aa19.69■□□□□ 0.74
TRADD-203ENST00000563348 DLL3Q9NYJ7 618 aa19.69■□□□□ 0.74
TRADD-203ENST00000563348 COX16Q9P0S2 106 aa19.69■□□□□ 0.74
TRADD-203ENST00000563348 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.69■□□□□ 0.74
TRADD-203ENST00000563348 RALGAPA1Q6GYQ0 2036 aa19.69■□□□□ 0.74
TRADD-203ENST00000563348 SPTBN2O15020 2390 aa19.68■□□□□ 0.74
TRADD-203ENST00000563348 M0QYT0 321 aa19.68■□□□□ 0.74
TRADD-203ENST00000563348 SYNCRIPO60506 623 aaKnown RBP19.68■□□□□ 0.74
TRADD-203ENST00000563348 ATP5BP06576 529 aaKnown RBP19.68■□□□□ 0.74
TRADD-203ENST00000563348 DLDP09622 509 aaKnown RBP19.68■□□□□ 0.74
TRADD-203ENST00000563348 POLR2EP19388 210 aaKnown RBP19.68■□□□□ 0.74
TRADD-203ENST00000563348 SDHBP21912 280 aa19.68■□□□□ 0.74
TRADD-203ENST00000563348 MPLP40238 635 aa19.68■□□□□ 0.74
TRADD-203ENST00000563348 CREB5Q02930 508 aa19.68■□□□□ 0.74
TRADD-203ENST00000563348 LMAN2Q12907 356 aa19.68■□□□□ 0.74
TRADD-203ENST00000563348 NME3Q13232 169 aa19.68■□□□□ 0.74
TRADD-203ENST00000563348 PUM1Q14671 1186 aaKnown RBP eCLIP19.68■□□□□ 0.74
TRADD-203ENST00000563348 C2CD6Q53TS8 623 aa19.68■□□□□ 0.74
TRADD-203ENST00000563348 FAM102AQ5T9C2 384 aaPredicted RBP19.68■□□□□ 0.74
TRADD-203ENST00000563348 SERPINA13PQ6UXR4 307 aa19.68■□□□□ 0.74
TRADD-203ENST00000563348 LPCAT2Q7L5N7 544 aa19.68■□□□□ 0.74
TRADD-203ENST00000563348 METTL3Q86U44 580 aaKnown RBP19.68■□□□□ 0.74
TRADD-203ENST00000563348 CARNMT1Q8N4J0 409 aa19.68■□□□□ 0.74
TRADD-203ENST00000563348 CYB5D2Q8WUJ1 264 aa19.68■□□□□ 0.74
TRADD-203ENST00000563348 TTC17Q96AE7 1141 aa19.68■□□□□ 0.74
TRADD-203ENST00000563348 RTN4Q9NQC3 1192 aaKnown RBP19.68■□□□□ 0.74
TRADD-203ENST00000563348 VPS45Q9NRW7 570 aa19.68■□□□□ 0.74
TRADD-203ENST00000563348 TMEM51Q9NW97 253 aa19.68■□□□□ 0.74
TRADD-203ENST00000563348 STAP1Q9ULZ2 295 aa19.68■□□□□ 0.74
TRADD-203ENST00000563348 F5H5T6 163 aa19.67■□□□□ 0.74
TRADD-203ENST00000563348 TEX33O43247 280 aa19.67■□□□□ 0.74
TRADD-203ENST00000563348 LUC7L3O95232 432 aaKnown RBP19.67■□□□□ 0.74
TRADD-203ENST00000563348 CAVIN2O95810 425 aa19.67■□□□□ 0.74
TRADD-203ENST00000563348 F9P00740 461 aa19.67■□□□□ 0.74
TRADD-203ENST00000563348 EPHX1P07099 455 aa19.67■□□□□ 0.74
TRADD-203ENST00000563348 PRKCHP24723 683 aa19.67■□□□□ 0.74
TRADD-203ENST00000563348 IQCB1Q15051 598 aa19.67■□□□□ 0.74
TRADD-203ENST00000563348 CCDC6Q16204 474 aa19.67■□□□□ 0.74
TRADD-203ENST00000563348 PTPRNQ16849 979 aa19.67■□□□□ 0.74
TRADD-203ENST00000563348 FSCBQ5H9T9 825 aa19.67■□□□□ 0.74
TRADD-203ENST00000563348 OTUD1Q5VV17 481 aaPredicted RBP19.67■□□□□ 0.74
TRADD-203ENST00000563348 SLC36A4Q6YBV0 504 aa19.67■□□□□ 0.74
TRADD-203ENST00000563348 TRIM72Q6ZMU5 477 aa19.67■□□□□ 0.74
TRADD-203ENST00000563348 PGAP3Q96FM1 320 aaPredicted RBP19.67■□□□□ 0.74
TRADD-203ENST00000563348 ADAM33Q9BZ11 813 aa19.67■□□□□ 0.74
TRADD-203ENST00000563348 MKRN2Q9H000 416 aaKnown RBP19.67■□□□□ 0.74
TRADD-203ENST00000563348 SLC6A17Q9H1V8 727 aa19.67■□□□□ 0.74
TRADD-203ENST00000563348 TMEM245Q9H330 911 aa19.67■□□□□ 0.74
TRADD-203ENST00000563348 KIAA1522Q9P206 1035 aaPredicted RBP19.67■□□□□ 0.74
TRADD-203ENST00000563348 TMEM59LQ9UK28 342 aa19.67■□□□□ 0.74
TRADD-203ENST00000563348 INTS6Q9UL03 887 aaKnown RBP19.67■□□□□ 0.74
TRADD-203ENST00000563348 CNOT1A5YKK6 2376 aaKnown RBP19.66■□□□□ 0.74
TRADD-203ENST00000563348 THADAQ6YHU6 1953 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms