RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 ACOX2Q99424 681 aa10.59□□□□□ -0.71
SNX29-202ENST00000563308 DPH1Q9BZG8 443 aa10.59□□□□□ -0.71
SNX29-202ENST00000563308 DNAJC17Q9NVM6 304 aaKnown RBP10.59□□□□□ -0.71
SNX29-202ENST00000563308 FBXO10Q9UK96 956 aa10.59□□□□□ -0.71
SNX29-202ENST00000563308 MEI4A8MW99 385 aa10.58□□□□□ -0.72
SNX29-202ENST00000563308 PPP1R3GB7ZBB8 358 aa10.58□□□□□ -0.72
SNX29-202ENST00000563308 NEDD8-MDP1E9PL57 170 aa10.58□□□□□ -0.72
SNX29-202ENST00000563308 ZNF217O75362 1048 aa10.58□□□□□ -0.72
SNX29-202ENST00000563308 GABBR2O75899 941 aa10.58□□□□□ -0.72
SNX29-202ENST00000563308 SMC2O95347 1197 aa10.58□□□□□ -0.72
SNX29-202ENST00000563308 TRIM21P19474 475 aaKnown RBP10.58□□□□□ -0.72
SNX29-202ENST00000563308 LRRC63Q05C16 580 aa10.58□□□□□ -0.72
SNX29-202ENST00000563308 CUL2Q13617 745 aa10.58□□□□□ -0.72
SNX29-202ENST00000563308 BECN1Q14457 450 aa10.58□□□□□ -0.72
SNX29-202ENST00000563308 PTPRNQ16849 979 aa10.58□□□□□ -0.72
SNX29-202ENST00000563308 DCAF17Q5H9S7 520 aaPredicted RBP10.58□□□□□ -0.72
SNX29-202ENST00000563308 C10orf76Q5T2E6 689 aa10.58□□□□□ -0.72
SNX29-202ENST00000563308 TCERG1LQ5VWI1 586 aa10.58□□□□□ -0.72
SNX29-202ENST00000563308 BTBD8Q5XKL5 378 aa10.58□□□□□ -0.72
SNX29-202ENST00000563308 EGFLAMQ63HQ2 1017 aa10.58□□□□□ -0.72
SNX29-202ENST00000563308 PM20D1Q6GTS8 502 aa10.58□□□□□ -0.72
SNX29-202ENST00000563308 ISM2Q6H9L7 571 aa10.58□□□□□ -0.72
SNX29-202ENST00000563308 GRAMD4Q6IC98 578 aa10.58□□□□□ -0.72
SNX29-202ENST00000563308 TPGS1Q6ZTW0 290 aa10.58□□□□□ -0.72
SNX29-202ENST00000563308 LMO3Q8TAP4 145 aa10.58□□□□□ -0.72
SNX29-202ENST00000563308 NDRG1Q92597 394 aaKnown RBP10.58□□□□□ -0.72
SNX29-202ENST00000563308 SMARCE1Q969G3 411 aa10.58□□□□□ -0.72
SNX29-202ENST00000563308 CCDC34Q96HJ3 373 aa10.58□□□□□ -0.72
SNX29-202ENST00000563308 ZNF578Q96N58 590 aaPredicted RBP10.58□□□□□ -0.72
SNX29-202ENST00000563308 TSG101Q99816 390 aa10.58□□□□□ -0.72
SNX29-202ENST00000563308 ZSWIM1Q9BR11 485 aa10.58□□□□□ -0.72
SNX29-202ENST00000563308 BBS2Q9BXC9 721 aa10.58□□□□□ -0.72
SNX29-202ENST00000563308 MIR1-1HGQ9H1L0 117 aa10.58□□□□□ -0.72
SNX29-202ENST00000563308 IL21RQ9HBE5 538 aa10.58□□□□□ -0.72
SNX29-202ENST00000563308 WDR35Q9P2L0 1181 aa10.58□□□□□ -0.72
SNX29-202ENST00000563308 ARMCX3Q9UH62 379 aaPredicted RBP10.58□□□□□ -0.72
SNX29-202ENST00000563308 LSM7Q9UK45 103 aaKnown RBP10.58□□□□□ -0.72
SNX29-202ENST00000563308 MAN1B1Q9UKM7 699 aa10.58□□□□□ -0.72
SNX29-202ENST00000563308 PCDHGA1Q9Y5H4 931 aa10.58□□□□□ -0.72
SNX29-202ENST00000563308 USP9YO00507 2555 aaPredicted RBP10.58□□□□□ -0.72
SNX29-202ENST00000563308 CACNA1DQ01668 2161 aa10.58□□□□□ -0.72
SNX29-202ENST00000563308 RELNP78509 3460 aa10.57□□□□□ -0.72
SNX29-202ENST00000563308 GOLGA6L4A6NEF3 574 aa10.57□□□□□ -0.72
SNX29-202ENST00000563308 O00370 1275 aa10.57□□□□□ -0.72
SNX29-202ENST00000563308 PMM2O15305 246 aa10.57□□□□□ -0.72
SNX29-202ENST00000563308 GADD45BO75293 160 aaPredicted RBP10.57□□□□□ -0.72
SNX29-202ENST00000563308 PENKP01210 267 aaPredicted RBP10.57□□□□□ -0.72
SNX29-202ENST00000563308 C1SP09871 688 aa10.57□□□□□ -0.72
SNX29-202ENST00000563308 GABRG2P18507 467 aa10.57□□□□□ -0.72
SNX29-202ENST00000563308 TNFRSF8P28908 595 aa10.57□□□□□ -0.72
SNX29-202ENST00000563308 WASP42768 502 aa10.57□□□□□ -0.72
SNX29-202ENST00000563308 FMO5P49326 533 aa10.57□□□□□ -0.72
SNX29-202ENST00000563308 TKTL1P51854 596 aa10.57□□□□□ -0.72
SNX29-202ENST00000563308 PDE4CQ08493 712 aa10.57□□□□□ -0.72
SNX29-202ENST00000563308 EFEMP1Q12805 493 aa10.57□□□□□ -0.72
SNX29-202ENST00000563308 GOLGA7BQ2TAP0 167 aa10.57□□□□□ -0.72
SNX29-202ENST00000563308 HLA-BQ31612 363 aa10.57□□□□□ -0.72
SNX29-202ENST00000563308 HES3Q5TGS1 186 aa10.57□□□□□ -0.72
SNX29-202ENST00000563308 FYB2Q5VWT5 728 aa10.57□□□□□ -0.72
SNX29-202ENST00000563308 TTI2Q6NXR4 508 aa10.57□□□□□ -0.72
SNX29-202ENST00000563308 SNRNP27Q8WVK2 155 aaKnown RBP10.57□□□□□ -0.72
SNX29-202ENST00000563308 TFAP2BQ92481 460 aa10.57□□□□□ -0.72
SNX29-202ENST00000563308 DHTKD1Q96HY7 919 aaPredicted RBP10.57□□□□□ -0.72
SNX29-202ENST00000563308 GABRG3Q99928 467 aa10.57□□□□□ -0.72
SNX29-202ENST00000563308 PLK2Q9NYY3 685 aa10.57□□□□□ -0.72
SNX29-202ENST00000563308 TSPAN16Q9UKR8 245 aa10.57□□□□□ -0.72
SNX29-202ENST00000563308 AGO1Q9UL18 857 aaKnown RBP10.57□□□□□ -0.72
SNX29-202ENST00000563308 FNDC3AQ9Y2H6 1198 aaKnown RBP10.57□□□□□ -0.72
SNX29-202ENST00000563308 FLNCQ14315 2725 aa10.57□□□□□ -0.72
SNX29-202ENST00000563308 MYO18AQ92614 2054 aaKnown RBP10.57□□□□□ -0.72
SNX29-202ENST00000563308 PLXND1Q9Y4D7 1925 aa10.56□□□□□ -0.72
SNX29-202ENST00000563308 MYH10P35580 1976 aa10.56□□□□□ -0.72
SNX29-202ENST00000563308 RNF225M0QZC1 329 aaPredicted RBP10.56□□□□□ -0.72
SNX29-202ENST00000563308 GFRA2O00451 464 aa10.56□□□□□ -0.72
SNX29-202ENST00000563308 XPO1O14980 1071 aaKnown RBP10.56□□□□□ -0.72
SNX29-202ENST00000563308 RFPL3O75679 317 aa10.56□□□□□ -0.72
SNX29-202ENST00000563308 ZBED1O96006 694 aa10.56□□□□□ -0.72
SNX29-202ENST00000563308 HMBSP08397 361 aa10.56□□□□□ -0.72
SNX29-202ENST00000563308 RALAP11233 206 aa10.56□□□□□ -0.72
SNX29-202ENST00000563308 NTSR1P30989 418 aa10.56□□□□□ -0.72
SNX29-202ENST00000563308 CORO1AP31146 461 aaKnown RBP10.56□□□□□ -0.72
SNX29-202ENST00000563308 YWHAGP61981 247 aaKnown RBP eCLIP10.56□□□□□ -0.72
SNX29-202ENST00000563308 COG7P83436 770 aa10.56□□□□□ -0.72
SNX29-202ENST00000563308 GOLGA8FQ08AF8 430 aa10.56□□□□□ -0.72
SNX29-202ENST00000563308 GOLGA8DPQ0D2H9 430 aa10.56□□□□□ -0.72
SNX29-202ENST00000563308 LRMPQ12912 555 aa10.56□□□□□ -0.72
SNX29-202ENST00000563308 MORC3Q14149 939 aa10.56□□□□□ -0.72
SNX29-202ENST00000563308 SGO2Q562F6 1265 aa10.56□□□□□ -0.72
SNX29-202ENST00000563308 FOXR2Q6PJQ5 311 aa10.56□□□□□ -0.72
SNX29-202ENST00000563308 CCDC81Q6ZN84 652 aa10.56□□□□□ -0.72
SNX29-202ENST00000563308 TADA2BQ86TJ2 420 aa10.56□□□□□ -0.72
SNX29-202ENST00000563308 SLC41A1Q8IVJ1 513 aa10.56□□□□□ -0.72
SNX29-202ENST00000563308 FAM217AQ8IXS0 508 aa10.56□□□□□ -0.72
SNX29-202ENST00000563308 LSMEM2Q8N112 164 aa10.56□□□□□ -0.72
SNX29-202ENST00000563308 RBBP8NLQ8NC74 664 aaPredicted RBP10.56□□□□□ -0.72
SNX29-202ENST00000563308 KAT5Q92993 513 aa10.56□□□□□ -0.72
SNX29-202ENST00000563308 BHMTQ93088 406 aa10.56□□□□□ -0.72
SNX29-202ENST00000563308 MOCOSQ96EN8 888 aa10.56□□□□□ -0.72
SNX29-202ENST00000563308 CEP63Q96MT8 703 aa10.56□□□□□ -0.72
SNX29-202ENST00000563308 XPO6Q96QU8 1125 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms