RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 MAD1L1Q9Y6D9 718 aa19.68■□□□□ 0.74
SMPD3-203ENST00000563226 OPHN1O60890 802 aa19.67■□□□□ 0.74
SMPD3-203ENST00000563226 OAZ2O95190 189 aa19.67■□□□□ 0.74
SMPD3-203ENST00000563226 CA4P22748 312 aa19.67■□□□□ 0.74
SMPD3-203ENST00000563226 FDFT1P37268 417 aa19.67■□□□□ 0.74
SMPD3-203ENST00000563226 EIF4EBP2Q13542 120 aaPredicted RBP19.67■□□□□ 0.74
SMPD3-203ENST00000563226 TCTN1Q2MV58 587 aa19.67■□□□□ 0.74
SMPD3-203ENST00000563226 CCDC197Q8NCU1 140 aa19.67■□□□□ 0.74
SMPD3-203ENST00000563226 DBF4BQ8NFT6 615 aa19.67■□□□□ 0.74
SMPD3-203ENST00000563226 SH3TC2Q8TF17 1288 aa19.67■□□□□ 0.74
SMPD3-203ENST00000563226 RNF34Q969K3 372 aa19.67■□□□□ 0.74
SMPD3-203ENST00000563226 EBNA1BP2Q99848 306 aaKnown RBP19.67■□□□□ 0.74
SMPD3-203ENST00000563226 NMUR1Q9HB89 426 aa19.67■□□□□ 0.74
SMPD3-203ENST00000563226 SFMBT1Q9UHJ3 866 aa19.67■□□□□ 0.74
SMPD3-203ENST00000563226 NUDT5Q9UKK9 219 aa19.67■□□□□ 0.74
SMPD3-203ENST00000563226 MSI1O43347 362 aaKnown RBP19.67■□□□□ 0.74
SMPD3-203ENST00000563226 GNRH1P01148 92 aa19.67■□□□□ 0.74
SMPD3-203ENST00000563226 TAC1P20366 129 aa19.67■□□□□ 0.74
SMPD3-203ENST00000563226 EPHB2P29323 1055 aa19.67■□□□□ 0.74
SMPD3-203ENST00000563226 SPRED3Q2MJR0 410 aa19.67■□□□□ 0.74
SMPD3-203ENST00000563226 RNF187Q5TA31 235 aaPredicted RBP19.67■□□□□ 0.74
SMPD3-203ENST00000563226 TRMT10BQ6PF06 316 aaKnown RBP19.67■□□□□ 0.74
SMPD3-203ENST00000563226 C10orf67Q8IYJ2 551 aa19.67■□□□□ 0.74
SMPD3-203ENST00000563226 PPM1NQ8N819 430 aa19.67■□□□□ 0.74
SMPD3-203ENST00000563226 LRRC39Q96DD0 335 aa19.67■□□□□ 0.74
SMPD3-203ENST00000563226 B3GALT6Q96L58 329 aa19.67■□□□□ 0.74
SMPD3-203ENST00000563226 EPAS1Q99814 870 aa19.67■□□□□ 0.74
SMPD3-203ENST00000563226 C12orf65Q9H3J6 166 aaKnown RBP19.67■□□□□ 0.74
SMPD3-203ENST00000563226 XAB2Q9HCS7 855 aaKnown RBP19.67■□□□□ 0.74
SMPD3-203ENST00000563226 TMEM161AQ9NX61 479 aa19.67■□□□□ 0.74
SMPD3-203ENST00000563226 NEU3Q9UQ49 428 aa19.67■□□□□ 0.74
SMPD3-203ENST00000563226 SCN5AQ14524 2016 aa19.67■□□□□ 0.74
SMPD3-203ENST00000563226 IRAK2O43187 625 aa19.66■□□□□ 0.74
SMPD3-203ENST00000563226 UGT1A9O60656 530 aa19.66■□□□□ 0.74
SMPD3-203ENST00000563226 STK10O94804 968 aaKnown RBP19.66■□□□□ 0.74
SMPD3-203ENST00000563226 KIAA0754O94854 1291 aa19.66■□□□□ 0.74
SMPD3-203ENST00000563226 PTPN3P26045 913 aa19.66■□□□□ 0.74
SMPD3-203ENST00000563226 VEGFBP49765 207 aa19.66■□□□□ 0.74
SMPD3-203ENST00000563226 CDK7P50613 346 aa19.66■□□□□ 0.74
SMPD3-203ENST00000563226 CRADDP78560 199 aa19.66■□□□□ 0.74
SMPD3-203ENST00000563226 FAM126BQ8IXS8 530 aa19.66■□□□□ 0.74
SMPD3-203ENST00000563226 SPOCK2Q92563 424 aa19.66■□□□□ 0.74
SMPD3-203ENST00000563226 CASP10Q92851 521 aa19.66■□□□□ 0.74
SMPD3-203ENST00000563226 SERAC1Q96JX3 654 aa19.66■□□□□ 0.74
SMPD3-203ENST00000563226 PGLYRP2Q96PD5 576 aa19.66■□□□□ 0.74
SMPD3-203ENST00000563226 FAM193BQ96PV7 902 aaPredicted RBP19.66■□□□□ 0.74
SMPD3-203ENST00000563226 GORASP1Q9BQQ3 440 aa19.66■□□□□ 0.74
SMPD3-203ENST00000563226 FTHL17Q9BXU8 183 aa19.66■□□□□ 0.74
SMPD3-203ENST00000563226 NSRP1Q9H0G5 558 aaKnown RBP19.66■□□□□ 0.74
SMPD3-203ENST00000563226 UGT1A7Q9HAW7 530 aa19.66■□□□□ 0.74
SMPD3-203ENST00000563226 UGT1A10Q9HAW8 530 aa19.66■□□□□ 0.74
SMPD3-203ENST00000563226 UGT1A8Q9HAW9 530 aa19.66■□□□□ 0.74
SMPD3-203ENST00000563226 SAMD15Q9P1V8 674 aa19.66■□□□□ 0.74
SMPD3-203ENST00000563226 ENPP3O14638 875 aa19.66■□□□□ 0.74
SMPD3-203ENST00000563226 TADA2AO75478 443 aa19.66■□□□□ 0.74
SMPD3-203ENST00000563226 MYCP01106 439 aaPredicted RBP19.66■□□□□ 0.74
SMPD3-203ENST00000563226 APOEP02649 317 aa19.66■□□□□ 0.74
SMPD3-203ENST00000563226 INHBAP08476 426 aa19.66■□□□□ 0.74
SMPD3-203ENST00000563226 PRKCHP24723 683 aa19.66■□□□□ 0.74
SMPD3-203ENST00000563226 SLC18A1P54219 525 aa19.66■□□□□ 0.74
SMPD3-203ENST00000563226 IL9RQ01113 521 aa19.66■□□□□ 0.74
SMPD3-203ENST00000563226 OLIG2Q13516 323 aa19.66■□□□□ 0.74
SMPD3-203ENST00000563226 DDR2Q16832 855 aa19.66■□□□□ 0.74
SMPD3-203ENST00000563226 VARS2Q5ST30 1063 aaKnown RBP19.66■□□□□ 0.74
SMPD3-203ENST00000563226 BTBD8Q5XKL5 378 aa19.66■□□□□ 0.74
SMPD3-203ENST00000563226 CGB2Q6NT52 195 aa19.66■□□□□ 0.74
SMPD3-203ENST00000563226 YTHDF3Q7Z739 585 aaKnown RBP19.66■□□□□ 0.74
SMPD3-203ENST00000563226 CTAGE3PQ8IX95 158 aa19.66■□□□□ 0.74
SMPD3-203ENST00000563226 OTUD6BQ8N6M0 293 aa19.66■□□□□ 0.74
SMPD3-203ENST00000563226 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.66■□□□□ 0.74
SMPD3-203ENST00000563226 OSER1Q9NX31 292 aa19.66■□□□□ 0.74
SMPD3-203ENST00000563226 KANSL3Q9P2N6 904 aa19.66■□□□□ 0.74
SMPD3-203ENST00000563226 PLXNA3P51805 1871 aa19.65■□□□□ 0.74
SMPD3-203ENST00000563226 A0A1W2PQH9 124 aa19.65■□□□□ 0.74
SMPD3-203ENST00000563226 SNX3O60493 162 aa19.65■□□□□ 0.74
SMPD3-203ENST00000563226 OAS1P00973 400 aaKnown RBP19.65■□□□□ 0.74
SMPD3-203ENST00000563226 PPIDQ08752 370 aaKnown RBP19.65■□□□□ 0.74
SMPD3-203ENST00000563226 SPARCL1Q14515 664 aa19.65■□□□□ 0.74
SMPD3-203ENST00000563226 PARP6Q2NL67 630 aa19.65■□□□□ 0.74
SMPD3-203ENST00000563226 BEND5Q7L4P6 421 aa19.65■□□□□ 0.74
SMPD3-203ENST00000563226 PID1Q7Z2X4 250 aa19.65■□□□□ 0.74
SMPD3-203ENST00000563226 TTC9BQ8N6N2 239 aa19.65■□□□□ 0.74
SMPD3-203ENST00000563226 CELF6Q96J87 481 aaKnown RBP19.65■□□□□ 0.74
SMPD3-203ENST00000563226 SIK2Q9H0K1 926 aa19.65■□□□□ 0.74
SMPD3-203ENST00000563226 SSU72Q9NP77 194 aaKnown RBP19.65■□□□□ 0.74
SMPD3-203ENST00000563226 ABCC13Q9NSE7 274 aa19.65■□□□□ 0.74
SMPD3-203ENST00000563226 ARHGEF38Q9NXL2 777 aa19.65■□□□□ 0.74
SMPD3-203ENST00000563226 MRPL42Q9Y6G3 142 aaKnown RBP19.65■□□□□ 0.74
SMPD3-203ENST00000563226 IKBKGQ9Y6K9 419 aa19.65■□□□□ 0.74
SMPD3-203ENST00000563226 WDR27A2RRH5 827 aa19.64■□□□□ 0.74
SMPD3-203ENST00000563226 FKTNO75072 461 aa19.64■□□□□ 0.74
SMPD3-203ENST00000563226 CSH1P0DML2 217 aa19.64■□□□□ 0.74
SMPD3-203ENST00000563226 CSH2P0DML3 217 aa19.64■□□□□ 0.74
SMPD3-203ENST00000563226 SRGAP2BP0DMP2 458 aa19.64■□□□□ 0.74
SMPD3-203ENST00000563226 HTRA3P83110 453 aa19.64■□□□□ 0.74
SMPD3-203ENST00000563226 GALNT2Q10471 571 aa19.64■□□□□ 0.74
SMPD3-203ENST00000563226 PLEKHG4Q58EX7 1191 aa19.64■□□□□ 0.74
SMPD3-203ENST00000563226 PDZD4Q76G19 769 aaPredicted RBP19.64■□□□□ 0.74
SMPD3-203ENST00000563226 CEP57Q86XR8 500 aa19.64■□□□□ 0.74
SMPD3-203ENST00000563226 UNC5BQ8IZJ1 945 aa19.64■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms