RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 PCDHB18PQ96TA0 734 aa17.19■□□□□ 0.34
CDT1-202ENST00000562747 AGPAT1Q99943 283 aa17.19■□□□□ 0.34
CDT1-202ENST00000562747 DDX50Q9BQ39 737 aaKnown RBP17.19■□□□□ 0.34
CDT1-202ENST00000562747 FAM204AQ9H8W3 233 aa17.19■□□□□ 0.34
CDT1-202ENST00000562747 TMEM51Q9NW97 253 aa17.19■□□□□ 0.34
CDT1-202ENST00000562747 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.19■□□□□ 0.34
CDT1-202ENST00000562747 PLK2Q9NYY3 685 aa17.19■□□□□ 0.34
CDT1-202ENST00000562747 AIPL1Q9NZN9 384 aa17.19■□□□□ 0.34
CDT1-202ENST00000562747 STAP1Q9ULZ2 295 aa17.19■□□□□ 0.34
CDT1-202ENST00000562747 ASPMQ8IZT6 3477 aa17.19■□□□□ 0.34
CDT1-202ENST00000562747 TBC1D3BA6NDS4 549 aa17.18■□□□□ 0.34
CDT1-202ENST00000562747 APOEP02649 317 aa17.18■□□□□ 0.34
CDT1-202ENST00000562747 TPM3P06753 285 aa17.18■□□□□ 0.34
CDT1-202ENST00000562747 CISD3P0C7P0 127 aa17.18■□□□□ 0.34
CDT1-202ENST00000562747 SLC2A3P11169 496 aa17.18■□□□□ 0.34
CDT1-202ENST00000562747 CHRM1P11229 460 aaPredicted RBP17.18■□□□□ 0.34
CDT1-202ENST00000562747 HNRNPLP14866 589 aaKnown RBP eCLIP17.18■□□□□ 0.34
CDT1-202ENST00000562747 NSFP46459 744 aaKnown RBP17.18■□□□□ 0.34
CDT1-202ENST00000562747 PITX1P78337 314 aaPredicted RBP17.18■□□□□ 0.34
CDT1-202ENST00000562747 MTA1Q13330 715 aa17.18■□□□□ 0.34
CDT1-202ENST00000562747 CLEC16AQ2KHT3 1053 aa17.18■□□□□ 0.34
CDT1-202ENST00000562747 C2orf27AQ580R0 203 aa17.18■□□□□ 0.34
CDT1-202ENST00000562747 RASSF3Q86WH2 238 aa17.18■□□□□ 0.34
CDT1-202ENST00000562747 DDI1Q8WTU0 396 aa17.18■□□□□ 0.34
CDT1-202ENST00000562747 P2RY11Q96G91 374 aa17.18■□□□□ 0.34
CDT1-202ENST00000562747 SLC2A11Q9BYW1 496 aa17.18■□□□□ 0.34
CDT1-202ENST00000562747 DDIT4Q9NX09 232 aa17.18■□□□□ 0.34
CDT1-202ENST00000562747 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.18■□□□□ 0.34
CDT1-202ENST00000562747 IFNKQ9P0W0 207 aa17.18■□□□□ 0.34
CDT1-202ENST00000562747 SLC27A6Q9Y2P4 619 aa17.18■□□□□ 0.34
CDT1-202ENST00000562747 STARD13Q9Y3M8 1113 aa17.18■□□□□ 0.34
CDT1-202ENST00000562747 A0A1W2PQJ5 194 aa17.17■□□□□ 0.34
CDT1-202ENST00000562747 C1QTNF9BB2RNN3 333 aa17.17■□□□□ 0.34
CDT1-202ENST00000562747 TRIM24O15164 1050 aa17.17■□□□□ 0.34
CDT1-202ENST00000562747 C1QTNF9P0C862 333 aa17.17■□□□□ 0.34
CDT1-202ENST00000562747 CCR1P32246 355 aa17.17■□□□□ 0.34
CDT1-202ENST00000562747 KIR2DL1P43626 348 aaPredicted RBP17.17■□□□□ 0.34
CDT1-202ENST00000562747 GSCP56915 257 aaPredicted RBP17.17■□□□□ 0.34
CDT1-202ENST00000562747 ASIC2Q16515 512 aa17.17■□□□□ 0.34
CDT1-202ENST00000562747 C2CD6Q53TS8 623 aa17.17■□□□□ 0.34
CDT1-202ENST00000562747 FAM133BQ5BKY9 247 aaKnown RBP17.17■□□□□ 0.34
CDT1-202ENST00000562747 ZC3H12AQ5D1E8 599 aaKnown RBP17.17■□□□□ 0.34
CDT1-202ENST00000562747 C10orf76Q5T2E6 689 aa17.17■□□□□ 0.34
CDT1-202ENST00000562747 MPP7Q5T2T1 576 aa17.17■□□□□ 0.34
CDT1-202ENST00000562747 SFMBT2Q5VUG0 894 aa17.17■□□□□ 0.34
CDT1-202ENST00000562747 ANO7Q6IWH7 933 aa17.17■□□□□ 0.34
CDT1-202ENST00000562747 MMS22LQ6ZRQ5 1243 aa17.17■□□□□ 0.34
CDT1-202ENST00000562747 PHF13Q86YI8 300 aaPredicted RBP17.17■□□□□ 0.34
CDT1-202ENST00000562747 CCDC33Q8N5R6 958 aa17.17■□□□□ 0.34
CDT1-202ENST00000562747 ATP6V0D2Q8N8Y2 350 aa17.17■□□□□ 0.34
CDT1-202ENST00000562747 MDGA1Q8NFP4 955 aa17.17■□□□□ 0.34
CDT1-202ENST00000562747 SLC30A5Q8TAD4 765 aa17.17■□□□□ 0.34
CDT1-202ENST00000562747 TMA16Q96EY4 203 aaKnown RBP17.17■□□□□ 0.34
CDT1-202ENST00000562747 BTN2A3PQ96KV6 586 aa17.17■□□□□ 0.34
CDT1-202ENST00000562747 NPY6RQ99463 290 aa17.17■□□□□ 0.34
CDT1-202ENST00000562747 SYT11Q9BT88 431 aa17.17■□□□□ 0.34
CDT1-202ENST00000562747 NUCKS1Q9H1E3 243 aaKnown RBP17.17■□□□□ 0.34
CDT1-202ENST00000562747 SEPT11Q9NVA2 429 aaKnown RBP17.17■□□□□ 0.34
CDT1-202ENST00000562747 SLC12A6Q9UHW9 1150 aa17.17■□□□□ 0.34
CDT1-202ENST00000562747 TMEM59LQ9UK28 342 aa17.17■□□□□ 0.34
CDT1-202ENST00000562747 WASF3Q9UPY6 502 aa17.17■□□□□ 0.34
CDT1-202ENST00000562747 GOLGA8SH3BPF8 625 aa17.16■□□□□ 0.34
CDT1-202ENST00000562747 M0QYT0 321 aa17.16■□□□□ 0.34
CDT1-202ENST00000562747 TSPAN3O60637 253 aa17.16■□□□□ 0.34
CDT1-202ENST00000562747 TOP3BO95985 862 aaKnown RBP17.16■□□□□ 0.34
CDT1-202ENST00000562747 SPINK2P20155 84 aa17.16■□□□□ 0.34
CDT1-202ENST00000562747 HOXD9P28356 352 aaPredicted RBP17.16■□□□□ 0.34
CDT1-202ENST00000562747 SLC6A4P31645 630 aa17.16■□□□□ 0.34
CDT1-202ENST00000562747 PRKCIP41743 596 aa17.16■□□□□ 0.34
CDT1-202ENST00000562747 RNASE9P60153 205 aaKnown RBP17.16■□□□□ 0.34
CDT1-202ENST00000562747 ZNF252P-AS1Q0IIN9 211 aa17.16■□□□□ 0.34
CDT1-202ENST00000562747 PIK3R6Q5UE93 754 aa17.16■□□□□ 0.34
CDT1-202ENST00000562747 NADSYN1Q6IA69 706 aa17.16■□□□□ 0.34
CDT1-202ENST00000562747 PPP1R2P3Q6NXS1 205 aa17.16■□□□□ 0.34
CDT1-202ENST00000562747 TRMT11Q7Z4G4 463 aaKnown RBP17.16■□□□□ 0.34
CDT1-202ENST00000562747 NT5C3BQ969T7 300 aa17.16■□□□□ 0.34
CDT1-202ENST00000562747 PGAP3Q96FM1 320 aaPredicted RBP17.16■□□□□ 0.34
CDT1-202ENST00000562747 C11orf70Q9BRQ4 267 aa17.16■□□□□ 0.34
CDT1-202ENST00000562747 ADAM22Q9P0K1 906 aa17.16■□□□□ 0.34
CDT1-202ENST00000562747 MMP17Q9ULZ9 603 aa17.16■□□□□ 0.34
CDT1-202ENST00000562747 IGF2RP11717 2491 aa17.16■□□□□ 0.34
CDT1-202ENST00000562747 PLXND1Q9Y4D7 1925 aa17.15■□□□□ 0.34
CDT1-202ENST00000562747 GOLGA6L7A0A1B0GV03 622 aa17.15■□□□□ 0.34
CDT1-202ENST00000562747 FAM170AA1A519 330 aa17.15■□□□□ 0.34
CDT1-202ENST00000562747 TYW5A2RUC4 315 aaKnown RBP17.15■□□□□ 0.34
CDT1-202ENST00000562747 KCNU1A8MYU2 1149 aa17.15■□□□□ 0.34
CDT1-202ENST00000562747 CDX4O14627 284 aaPredicted RBP17.15■□□□□ 0.34
CDT1-202ENST00000562747 CBFA2T2O43439 604 aa17.15■□□□□ 0.34
CDT1-202ENST00000562747 MOCS2O96007 188 aaPredicted RBP17.15■□□□□ 0.34
CDT1-202ENST00000562747 F9P00740 461 aa17.15■□□□□ 0.34
CDT1-202ENST00000562747 CALB1P05937 261 aa17.15■□□□□ 0.34
CDT1-202ENST00000562747 PROS1P07225 676 aa17.15■□□□□ 0.34
CDT1-202ENST00000562747 ABCB4P21439 1286 aa17.15■□□□□ 0.34
CDT1-202ENST00000562747 TNFAIP3P21580 790 aa17.15■□□□□ 0.34
CDT1-202ENST00000562747 TIE1P35590 1138 aa17.15■□□□□ 0.34
CDT1-202ENST00000562747 SULT1E1P49888 294 aa17.15■□□□□ 0.34
CDT1-202ENST00000562747 C1QBPQ07021 282 aaKnown RBP17.15■□□□□ 0.34
CDT1-202ENST00000562747 PTP4A2Q12974 167 aa17.15■□□□□ 0.34
CDT1-202ENST00000562747 NME3Q13232 169 aa17.15■□□□□ 0.34
CDT1-202ENST00000562747 SLC25A52Q3SY17 297 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms