RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 TTC39BQ5VTQ0 682 aaPredicted RBP7.76□□□□□ -1.17
TCF4-216ENST00000562680 FUT10Q6P4F1 479 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 RASGEF1CQ8N431 466 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 TTC17Q96AE7 1141 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 ZFP42Q96MM3 310 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 BCO2Q9BYV7 579 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 TKTL2Q9H0I9 626 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 PTPRJQ12913 1337 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 RCCD1A6NED2 376 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 ANKRD65E5RJM6 399 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 ZNF197O14709 1029 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 NDUFS3O75489 264 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 ATP5HO75947 161 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 ITGAVP06756 1048 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 SERPINF2P08697 491 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 NAT1P18440 290 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 CTNNB1P35222 781 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 CHKAP35790 457 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 FRA10AC1Q70Z53 315 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 XYLT1Q86Y38 959 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 PGLYRP2Q96PD5 576 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 ADGRE3Q9BY15 652 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 UBE2OQ9C0C9 1292 aaKnown RBP7.75□□□□□ -1.17
TCF4-216ENST00000562680 PHACTR1Q9C0D0 580 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 BCAS3Q9H6U6 928 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 ACP6Q9NPH0 428 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 GDF3Q9NR23 364 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 TRMT13Q9NUP7 481 aaKnown RBP7.75□□□□□ -1.17
TCF4-216ENST00000562680 SEPT3Q9UH03 358 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 PKP3Q9Y446 797 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 RGPD3A6NKT7 1758 aaPredicted RBP7.75□□□□□ -1.17
TCF4-216ENST00000562680 RGPD4Q7Z3J3 1758 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 MBLAC1A4D2B0 266 aaPredicted RBP7.75□□□□□ -1.17
TCF4-216ENST00000562680 FAM47DPA6NHR8 397 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 C2orf81A6NN90 581 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 ZNF263O14978 683 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 STX7O15400 261 aaKnown RBP7.75□□□□□ -1.17
TCF4-216ENST00000562680 JCHAINP01591 159 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 MYL4P12829 197 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 GFAPP14136 432 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 CST5P28325 142 aaPredicted RBP7.75□□□□□ -1.17
TCF4-216ENST00000562680 HSD17B3P37058 310 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 ASPAP45381 313 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 PLA2G4AP47712 749 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 CDH17Q12864 832 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 ASTE1Q2TB18 679 aaPredicted RBP7.75□□□□□ -1.17
TCF4-216ENST00000562680 ZNF618Q5T7W0 954 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 LRRC15Q8TF66 581 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 DDI1Q8WTU0 396 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 BORCS6Q96GS4 357 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 PNKPQ96T60 521 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 MINDY3Q9H8M7 445 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 ASAH2Q9NR71 780 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 SPATA7Q9P0W8 599 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 LRRC37AA6NMS7 1700 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 KIAA1551Q9HCM1 1747 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 hCG_1818297A0A087WSY0 165 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 TRAV19A0A0A6YYK7 116 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 GMNCA6NCL1 334 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 MDM4O15151 490 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 CRTAMO95727 393 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 CLTBP09497 229 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 RGS4P49798 205 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 TLE2Q04725 743 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 INCA1Q0VD86 236 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 NUDCD3Q8IVD9 361 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 SUSD3Q96L08 255 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 FIZ1Q96SL8 496 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 TMEM121Q9BTD3 319 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 ARHGAP39Q9C0H5 1083 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 NDEL1Q9GZM8 345 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 FGFR1OP2Q9NVK5 253 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 RBM22Q9NW64 420 aaKnown RBP eCLIP7.75□□□□□ -1.17
TCF4-216ENST00000562680 VPS28Q9UK41 221 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 GABRQQ9UN88 632 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 GNEQ9Y223 722 aaKnown RBP7.75□□□□□ -1.17
TCF4-216ENST00000562680 FNDC3AQ9Y2H6 1198 aaKnown RBP7.75□□□□□ -1.17
TCF4-216ENST00000562680 A0A1W2PQ45 241 aaPredicted RBP7.75□□□□□ -1.17
TCF4-216ENST00000562680 A0A1W2PQY0 241 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 ZWINTO95229 277 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 CES1P23141 567 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 CCND3P30281 292 aaPredicted RBP7.75□□□□□ -1.17
TCF4-216ENST00000562680 PARP6Q2NL67 630 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 ANKRD20A8PQ5CZ79 823 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 FSCBQ5H9T9 825 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 TPGS2Q68CL5 300 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 ZIM3Q96PE6 472 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 XPO6Q96QU8 1125 aaKnown RBP7.75□□□□□ -1.17
TCF4-216ENST00000562680 CENPKQ9BS16 269 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 ATXN3LQ9H3M9 355 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 ELAC1Q9H777 363 aaKnown RBP7.75□□□□□ -1.17
TCF4-216ENST00000562680 FAM8A1Q9UBU6 413 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 OR12D3Q9UGF7 316 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.75□□□□□ -1.17
TCF4-216ENST00000562680 CHADO15335 359 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 UNGP13051 313 aaPredicted RBP7.75□□□□□ -1.17
TCF4-216ENST00000562680 KRT4P19013 534 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 AMPD1P23109 780 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 TWF1Q12792 350 aa7.75□□□□□ -1.17
TCF4-216ENST00000562680 GTF2H3Q13889 308 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms