RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 MINDY3Q9H8M7 445 aa14.35□□□□□ -0.11
VPS9D1-202ENST00000561976 H3BNX3 289 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 DPYSL4O14531 572 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 AIM2O14862 343 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 PFKMP08237 780 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 FDFT1P37268 417 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 ATXN1P54253 815 aaKnown RBP14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 MTTPP55157 894 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 SLC6A3Q01959 620 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 R3HDM1Q15032 1099 aaKnown RBP14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 STEAP4Q687X5 459 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 CES3Q6UWW8 571 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 KBTBD6Q86V97 674 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 TNS4Q8IZW8 715 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 COLGALT1Q8NBJ5 622 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 HTR3CQ8WXA8 447 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 HIC2Q96JB3 615 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 MPP4Q96JB8 637 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 QKIQ96PU8 341 aaKnown RBP eCLIP14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 BTBD9Q96Q07 612 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 PPP1R16BQ96T49 567 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 B3GNT5Q9BYG0 378 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 CDY2AQ9Y6F7 541 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 CDY1Q9Y6F8 540 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 NOP56O00567 594 aaKnown RBP14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 ZNF195O14628 629 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 ADCY6O43306 1168 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 ZBTB14O43829 449 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 GAS2O43903 313 aaKnown RBP14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 SPATA31D3P0C874 917 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 ERVK-10P10266 1014 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 SERPINB5P36952 375 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 GARSP41250 739 aaKnown RBP14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 HARS2P49590 506 aaKnown RBP14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 CLCN3P51790 818 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 KLF10Q13118 480 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 PRAMEF18Q5VWM3 479 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 SMYD5Q6GMV2 418 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 POTEAQ6S8J7 498 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 SPATA31D4Q6ZUB0 917 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 CMC1Q7Z7K0 106 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 ZNF781Q8N8C0 355 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 OXCT2Q9BYC2 517 aaPredicted RBP14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 CEP41Q9BYV8 373 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 FAM49BQ9NUQ9 324 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 HOXC10Q9NYD6 342 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 NDUFA13Q9P0J0 144 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 MORF4L1Q9UBU8 362 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 G3BP2Q9UN86 482 aaKnown RBP14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 TNFSF13BQ9Y275 285 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 MFHAS1Q9Y4C4 1052 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 PHIPQ8WWQ0 1821 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 SPDYE16A6NNV3 312 aaPredicted RBP14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 CASQ2O14958 399 aaPredicted RBP14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 PEX1O43933 1283 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 PIM1P11309 404 aaPredicted RBP14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 ALOX15P16050 662 aaPredicted RBP14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 PGAM1P18669 254 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 PMLP29590 882 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 MLH1P40692 756 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 NR2C2P49116 596 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 CNGA3Q16281 694 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 INSCQ1MX18 579 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 SLC9B1Q4ZJI4 515 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 PPP1R26Q5T8A7 1209 aaPredicted RBP14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 DCAF15Q66K64 600 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 TMC7Q7Z402 723 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 PQLC1Q8N2U9 271 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 NETO2Q8NC67 525 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 FAM81AQ8TBF8 368 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 PGBD4Q96DM1 585 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 DCUN1D1Q96GG9 259 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 Q9H521 79 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 IRAK4Q9NWZ3 460 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 SEPT10Q9P0V9 454 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 AP4E1Q9UPM8 1137 aa14.34□□□□□ -0.11
VPS9D1-202ENST00000561976 A0A0A0MRY4 1105 aa14.33□□□□□ -0.12
VPS9D1-202ENST00000561976 PRKCGP05129 697 aa14.33□□□□□ -0.12
VPS9D1-202ENST00000561976 NUDT2P50583 147 aa14.33□□□□□ -0.12
VPS9D1-202ENST00000561976 TLR1Q15399 786 aa14.33□□□□□ -0.12
VPS9D1-202ENST00000561976 ARMC3Q5W041 872 aa14.33□□□□□ -0.12
VPS9D1-202ENST00000561976 METTL7BQ6UX53 244 aa14.33□□□□□ -0.12
VPS9D1-202ENST00000561976 PPP1R36Q96LQ0 422 aa14.33□□□□□ -0.12
VPS9D1-202ENST00000561976 LRGUKQ96M69 825 aa14.33□□□□□ -0.12
VPS9D1-202ENST00000561976 SPATA13Q96N96 652 aa14.33□□□□□ -0.12
VPS9D1-202ENST00000561976 LGMNQ99538 433 aa14.33□□□□□ -0.12
VPS9D1-202ENST00000561976 RTKNQ9BST9 563 aa14.33□□□□□ -0.12
VPS9D1-202ENST00000561976 DTLQ9NZJ0 730 aa14.33□□□□□ -0.12
VPS9D1-202ENST00000561976 ATXN10Q9UBB4 475 aa14.33□□□□□ -0.12
VPS9D1-202ENST00000561976 KIAA1257Q9ULG3 409 aa14.33□□□□□ -0.12
VPS9D1-202ENST00000561976 PSMD13Q9UNM6 376 aa14.33□□□□□ -0.12
VPS9D1-202ENST00000561976 SSX2IPQ9Y2D8 614 aa14.33□□□□□ -0.12
VPS9D1-202ENST00000561976 GOLGA8QA0A0J9YX86 632 aa14.33□□□□□ -0.12
VPS9D1-202ENST00000561976 GOLGA8OA6NCC3 632 aa14.33□□□□□ -0.12
VPS9D1-202ENST00000561976 GOLGA8NF8WBI6 632 aa14.33□□□□□ -0.12
VPS9D1-202ENST00000561976 CLPTM1O96005 669 aa14.33□□□□□ -0.12
VPS9D1-202ENST00000561976 MLNP12872 115 aa14.33□□□□□ -0.12
VPS9D1-202ENST00000561976 MBTD1Q05BQ5 628 aa14.33□□□□□ -0.12
VPS9D1-202ENST00000561976 TMEM132DQ14C87 1099 aa14.33□□□□□ -0.12
VPS9D1-202ENST00000561976 OGFRL1Q5TC84 451 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms