RNA–Protein interactions for RNA: ENST00000561956.1

AC009054.2-201, humanhuman

TSL 3 BASIC

Gene AC009054.2, Length 374 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009054.2-201ENST00000561956 IRF1P10914 325 aa11.2□□□□□ -0.62
AC009054.2-201ENST00000561956 PECAM1P16284 738 aaPredicted RBP11.2□□□□□ -0.62
AC009054.2-201ENST00000561956 CEBPBP17676 345 aa11.2□□□□□ -0.62
AC009054.2-201ENST00000561956 ERCC2P18074 760 aa11.2□□□□□ -0.62
AC009054.2-201ENST00000561956 POU3F3P20264 500 aaPredicted RBP11.2□□□□□ -0.62
AC009054.2-201ENST00000561956 AMPD1P23109 780 aa11.2□□□□□ -0.62
AC009054.2-201ENST00000561956 CORO1AP31146 461 aaKnown RBP11.2□□□□□ -0.62
AC009054.2-201ENST00000561956 CHRNA3P32297 505 aa11.2□□□□□ -0.62
AC009054.2-201ENST00000561956 SLC11A2P49281 568 aa11.2□□□□□ -0.62
AC009054.2-201ENST00000561956 HARS2P49590 506 aaKnown RBP11.2□□□□□ -0.62
AC009054.2-201ENST00000561956 TUBB4BP68371 445 aa11.2□□□□□ -0.62
AC009054.2-201ENST00000561956 ZXDBP98169 803 aa11.2□□□□□ -0.62
AC009054.2-201ENST00000561956 OTUD4Q01804 1114 aaKnown RBP11.2□□□□□ -0.62
AC009054.2-201ENST00000561956 ADAM15Q13444 863 aa11.2□□□□□ -0.62
AC009054.2-201ENST00000561956 AUHQ13825 339 aaKnown RBP11.2□□□□□ -0.62
AC009054.2-201ENST00000561956 GRIN2CQ14957 1233 aa11.2□□□□□ -0.62
AC009054.2-201ENST00000561956 NOMO1Q15155 1222 aa11.2□□□□□ -0.62
AC009054.2-201ENST00000561956 CCNG2Q16589 344 aa11.2□□□□□ -0.62
AC009054.2-201ENST00000561956 TEX35Q5T0J7 233 aa11.2□□□□□ -0.62
AC009054.2-201ENST00000561956 RARS2Q5T160 578 aaKnown RBP11.2□□□□□ -0.62
AC009054.2-201ENST00000561956 RAP1GAP2Q684P5 730 aa11.2□□□□□ -0.62
AC009054.2-201ENST00000561956 NCBP2-AS2Q69YL0 99 aa11.2□□□□□ -0.62
AC009054.2-201ENST00000561956 NADSYN1Q6IA69 706 aa11.2□□□□□ -0.62
AC009054.2-201ENST00000561956 ANKRD54Q6NXT1 300 aa11.2□□□□□ -0.62
AC009054.2-201ENST00000561956 TTC27Q6P3X3 843 aa11.2□□□□□ -0.62
AC009054.2-201ENST00000561956 SYCE2Q6PIF2 218 aa11.2□□□□□ -0.62
AC009054.2-201ENST00000561956 KLHL7Q8IXQ5 586 aa11.2□□□□□ -0.62
AC009054.2-201ENST00000561956 TTC13Q8NBP0 860 aa11.2□□□□□ -0.62
AC009054.2-201ENST00000561956 ACTL9Q8TC94 416 aa11.2□□□□□ -0.62
AC009054.2-201ENST00000561956 C1orf54Q8WWF1 131 aa11.2□□□□□ -0.62
AC009054.2-201ENST00000561956 ATG4AQ8WYN0 398 aa11.2□□□□□ -0.62
AC009054.2-201ENST00000561956 WBP2Q969T9 261 aa11.2□□□□□ -0.62
AC009054.2-201ENST00000561956 MAGOHBQ96A72 148 aaKnown RBP11.2□□□□□ -0.62
AC009054.2-201ENST00000561956 HAUS1Q96CS2 278 aa11.2□□□□□ -0.62
AC009054.2-201ENST00000561956 KRT12Q99456 494 aa11.2□□□□□ -0.62
AC009054.2-201ENST00000561956 FRMD8P1Q9BZ68 369 aaPredicted RBP11.2□□□□□ -0.62
AC009054.2-201ENST00000561956 DDX47Q9H0S4 455 aaKnown RBP11.2□□□□□ -0.62
AC009054.2-201ENST00000561956 SLITRK6Q9H5Y7 841 aa11.2□□□□□ -0.62
AC009054.2-201ENST00000561956 ZMYM5Q9UJ78 669 aa11.2□□□□□ -0.62
AC009054.2-201ENST00000561956 ARHGAP26Q9UNA1 814 aa11.2□□□□□ -0.62
AC009054.2-201ENST00000561956 MTCH2Q9Y6C9 303 aa11.2□□□□□ -0.62
AC009054.2-201ENST00000561956 REV3LO60673 3130 aa11.2□□□□□ -0.62
AC009054.2-201ENST00000561956 NUP210Q8TEM1 1887 aaPredicted RBP11.2□□□□□ -0.62
AC009054.2-201ENST00000561956 IGLV3-10A0A075B6K4 115 aa11.19□□□□□ -0.62
AC009054.2-201ENST00000561956 SOX1O00570 391 aaPredicted RBP11.19□□□□□ -0.62
AC009054.2-201ENST00000561956 FGF10O15520 208 aaPredicted RBP11.19□□□□□ -0.62
AC009054.2-201ENST00000561956 DAPK3O43293 454 aa11.19□□□□□ -0.62
AC009054.2-201ENST00000561956 MFSD11O43934 449 aa11.19□□□□□ -0.62
AC009054.2-201ENST00000561956 KLKB1P03952 638 aa11.19□□□□□ -0.62
AC009054.2-201ENST00000561956 HOXB8P17481 243 aaPredicted RBP11.19□□□□□ -0.62
AC009054.2-201ENST00000561956 TACR2P21452 398 aa11.19□□□□□ -0.62
AC009054.2-201ENST00000561956 EPHB2P29323 1055 aa11.19□□□□□ -0.62
AC009054.2-201ENST00000561956 COILP38432 576 aaPredicted RBP11.19□□□□□ -0.62
AC009054.2-201ENST00000561956 VCPP55072 806 aaKnown RBP11.19□□□□□ -0.62
AC009054.2-201ENST00000561956 GBE1Q04446 702 aa11.19□□□□□ -0.62
AC009054.2-201ENST00000561956 ADGRE1Q14246 886 aa11.19□□□□□ -0.62
AC009054.2-201ENST00000561956 PAFAH1B3Q15102 231 aaKnown RBP11.19□□□□□ -0.62
AC009054.2-201ENST00000561956 CTC1Q2NKJ3 1217 aa11.19□□□□□ -0.62
AC009054.2-201ENST00000561956 C5orf22Q49AR2 442 aa11.19□□□□□ -0.62
AC009054.2-201ENST00000561956 FAM133BQ5BKY9 247 aaKnown RBP11.19□□□□□ -0.62
AC009054.2-201ENST00000561956 PRPF38BQ5VTL8 546 aaKnown RBP11.19□□□□□ -0.62
AC009054.2-201ENST00000561956 C8orf74Q6P047 294 aa11.19□□□□□ -0.62
AC009054.2-201ENST00000561956 DRICH1Q6PGQ1 229 aaPredicted RBP11.19□□□□□ -0.62
AC009054.2-201ENST00000561956 NPNTQ6UXI9 565 aa11.19□□□□□ -0.62
AC009054.2-201ENST00000561956 Q6ZNB5 142 aa11.19□□□□□ -0.62
AC009054.2-201ENST00000561956 GPR149Q86SP6 731 aa11.19□□□□□ -0.62
AC009054.2-201ENST00000561956 CHSY1Q86X52 802 aa11.19□□□□□ -0.62
AC009054.2-201ENST00000561956 DDX42Q86XP3 938 aaKnown RBP eCLIP11.19□□□□□ -0.62
AC009054.2-201ENST00000561956 CMTM8Q8IZV2 173 aa11.19□□□□□ -0.62
AC009054.2-201ENST00000561956 SLC35B2Q8TB61 432 aa11.19□□□□□ -0.62
AC009054.2-201ENST00000561956 ITFG1Q8TB96 612 aa11.19□□□□□ -0.62
AC009054.2-201ENST00000561956 NKD2Q969F2 451 aaPredicted RBP11.19□□□□□ -0.62
AC009054.2-201ENST00000561956 RUNDC3BQ96NL0 473 aa11.19□□□□□ -0.62
AC009054.2-201ENST00000561956 FAM118BQ9BPY3 351 aa11.19□□□□□ -0.62
AC009054.2-201ENST00000561956 STIM2Q9P246 746 aa11.19□□□□□ -0.62
AC009054.2-201ENST00000561956 PPARGC1AQ9UBK2 798 aaKnown RBP11.19□□□□□ -0.62
AC009054.2-201ENST00000561956 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.19□□□□□ -0.62
AC009054.2-201ENST00000561956 PCYOX1Q9UHG3 505 aa11.19□□□□□ -0.62
AC009054.2-201ENST00000561956 STOML2Q9UJZ1 356 aa11.19□□□□□ -0.62
AC009054.2-201ENST00000561956 AGO1Q9UL18 857 aaKnown RBP11.19□□□□□ -0.62
AC009054.2-201ENST00000561956 MRPS23Q9Y3D9 190 aaKnown RBP11.19□□□□□ -0.62
AC009054.2-201ENST00000561956 MFHAS1Q9Y4C4 1052 aa11.19□□□□□ -0.62
AC009054.2-201ENST00000561956 V9GYY5 206 aaPredicted RBP11.19□□□□□ -0.62
AC009054.2-201ENST00000561956 GOLGA6L7A0A1B0GV03 622 aa11.18□□□□□ -0.62
AC009054.2-201ENST00000561956 DRGXA6NNA5 263 aa11.18□□□□□ -0.62
AC009054.2-201ENST00000561956 WASH4PA8MWX3 477 aa11.18□□□□□ -0.62
AC009054.2-201ENST00000561956 LEFTY2O00292 366 aa11.18□□□□□ -0.62
AC009054.2-201ENST00000561956 RAD51CO43502 376 aa11.18□□□□□ -0.62
AC009054.2-201ENST00000561956 PRAMEF12O95522 483 aa11.18□□□□□ -0.62
AC009054.2-201ENST00000561956 TCF3P15923 654 aa11.18□□□□□ -0.62
AC009054.2-201ENST00000561956 RHOQP17081 205 aa11.18□□□□□ -0.62
AC009054.2-201ENST00000561956 WEE1P30291 646 aa11.18□□□□□ -0.62
AC009054.2-201ENST00000561956 SLC6A4P31645 630 aa11.18□□□□□ -0.62
AC009054.2-201ENST00000561956 AVPR1AP37288 418 aa11.18□□□□□ -0.62
AC009054.2-201ENST00000561956 PTGIRP43119 386 aa11.18□□□□□ -0.62
AC009054.2-201ENST00000561956 KCNJ1P48048 391 aa11.18□□□□□ -0.62
AC009054.2-201ENST00000561956 NR2C2P49116 596 aa11.18□□□□□ -0.62
AC009054.2-201ENST00000561956 TERF1P54274 439 aa11.18□□□□□ -0.62
AC009054.2-201ENST00000561956 SNX1Q13596 522 aa11.18□□□□□ -0.62
AC009054.2-201ENST00000561956 BYSLQ13895 437 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms