RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 PSMB4P28070 264 aa10.1□□□□□ -0.79
SMG1-205ENST00000561947 NEK3P51956 506 aa10.1□□□□□ -0.79
SMG1-205ENST00000561947 NOGQ13253 232 aa10.1□□□□□ -0.79
SMG1-205ENST00000561947 PARP6Q2NL67 630 aa10.1□□□□□ -0.79
SMG1-205ENST00000561947 LRRC8BQ6P9F7 803 aa10.1□□□□□ -0.79
SMG1-205ENST00000561947 TAC4Q86UU9 113 aa10.1□□□□□ -0.79
SMG1-205ENST00000561947 TP53INP2Q8IXH6 220 aa10.1□□□□□ -0.79
SMG1-205ENST00000561947 ZNF567Q8N184 647 aa10.1□□□□□ -0.79
SMG1-205ENST00000561947 PDCD7Q8N8D1 485 aaKnown RBP10.1□□□□□ -0.79
SMG1-205ENST00000561947 SMC1BQ8NDV3 1235 aa10.1□□□□□ -0.79
SMG1-205ENST00000561947 STAMBPL1Q96FJ0 436 aa10.1□□□□□ -0.79
SMG1-205ENST00000561947 CEP41Q9BYV8 373 aa10.1□□□□□ -0.79
SMG1-205ENST00000561947 TKTL2Q9H0I9 626 aa10.1□□□□□ -0.79
SMG1-205ENST00000561947 WDCPQ9H6R7 721 aa10.1□□□□□ -0.79
SMG1-205ENST00000561947 RGS18Q9NS28 235 aa10.1□□□□□ -0.79
SMG1-205ENST00000561947 IGSF9Q9P2J2 1179 aa10.1□□□□□ -0.79
SMG1-205ENST00000561947 SRRDQ9UH36 339 aa10.1□□□□□ -0.79
SMG1-205ENST00000561947 PHTF1Q9UMS5 762 aa10.1□□□□□ -0.79
SMG1-205ENST00000561947 PCDHB8Q9UN66 801 aa10.1□□□□□ -0.79
SMG1-205ENST00000561947 MYO16Q9Y6X6 1858 aa10.1□□□□□ -0.79
SMG1-205ENST00000561947 TRIM49D1C9J1S8 452 aa10.1□□□□□ -0.79
SMG1-205ENST00000561947 NCAM2O15394 837 aa10.1□□□□□ -0.79
SMG1-205ENST00000561947 AOC2O75106 756 aa10.1□□□□□ -0.79
SMG1-205ENST00000561947 FAM155BO75949 473 aa10.1□□□□□ -0.79
SMG1-205ENST00000561947 KRT37O76014 449 aa10.1□□□□□ -0.79
SMG1-205ENST00000561947 CKBP12277 381 aa10.1□□□□□ -0.79
SMG1-205ENST00000561947 LGSNQ5TDP6 509 aa10.1□□□□□ -0.79
SMG1-205ENST00000561947 STEAP4Q687X5 459 aa10.1□□□□□ -0.79
SMG1-205ENST00000561947 RNF43Q68DV7 783 aa10.1□□□□□ -0.79
SMG1-205ENST00000561947 TRAF7Q6Q0C0 670 aa10.1□□□□□ -0.79
SMG1-205ENST00000561947 BEND5Q7L4P6 421 aa10.1□□□□□ -0.79
SMG1-205ENST00000561947 PACS2Q86VP3 889 aa10.1□□□□□ -0.79
SMG1-205ENST00000561947 CNPY4Q8N129 248 aa10.1□□□□□ -0.79
SMG1-205ENST00000561947 DQX1Q8TE96 717 aaKnown RBP10.1□□□□□ -0.79
SMG1-205ENST00000561947 EPAS1Q99814 870 aa10.1□□□□□ -0.79
SMG1-205ENST00000561947 TRIM56Q9BRZ2 755 aaKnown RBP10.1□□□□□ -0.79
SMG1-205ENST00000561947 TRIM62Q9BVG3 475 aa10.1□□□□□ -0.79
SMG1-205ENST00000561947 SLC17A7Q9P2U7 560 aa10.1□□□□□ -0.79
SMG1-205ENST00000561947 SLC12A4Q9UP95 1085 aa10.1□□□□□ -0.79
SMG1-205ENST00000561947 SHROOM3Q8TF72 1996 aa10.09□□□□□ -0.79
SMG1-205ENST00000561947 F8W810 466 aa10.09□□□□□ -0.79
SMG1-205ENST00000561947 EDF1O60869 148 aaKnown RBP10.09□□□□□ -0.79
SMG1-205ENST00000561947 DNAJC8O75937 253 aaPredicted RBP10.09□□□□□ -0.79
SMG1-205ENST00000561947 EOMESO95936 686 aa10.09□□□□□ -0.79
SMG1-205ENST00000561947 SNRPAP09012 282 aaKnown RBP10.09□□□□□ -0.79
SMG1-205ENST00000561947 CSH1P0DML2 217 aa10.09□□□□□ -0.79
SMG1-205ENST00000561947 CSH2P0DML3 217 aa10.09□□□□□ -0.79
SMG1-205ENST00000561947 PYGBP11216 843 aa10.09□□□□□ -0.79
SMG1-205ENST00000561947 PPIDQ08752 370 aaKnown RBP10.09□□□□□ -0.79
SMG1-205ENST00000561947 IFRD2Q12894 506 aaPredicted RBP10.09□□□□□ -0.79
SMG1-205ENST00000561947 TRMT10BQ6PF06 316 aaKnown RBP10.09□□□□□ -0.79
SMG1-205ENST00000561947 GLB1LQ6UWU2 654 aa10.09□□□□□ -0.79
SMG1-205ENST00000561947 RTN4RL1Q86UN2 441 aaPredicted RBP10.09□□□□□ -0.79
SMG1-205ENST00000561947 NPWQ8N729 165 aa10.09□□□□□ -0.79
SMG1-205ENST00000561947 ZNF75CPQ92670 426 aaPredicted RBP10.09□□□□□ -0.79
SMG1-205ENST00000561947 GLT1D1Q96MS3 346 aa10.09□□□□□ -0.79
SMG1-205ENST00000561947 BRD8Q9H0E9 1235 aa10.09□□□□□ -0.79
SMG1-205ENST00000561947 SLCO1B3Q9NPD5 702 aa10.09□□□□□ -0.79
SMG1-205ENST00000561947 HAUS2Q9NVX0 235 aa10.09□□□□□ -0.79
SMG1-205ENST00000561947 KLHL14Q9P2G3 628 aa10.09□□□□□ -0.79
SMG1-205ENST00000561947 SNX10Q9Y5X0 201 aa10.09□□□□□ -0.79
SMG1-205ENST00000561947 WDR27A2RRH5 827 aa10.09□□□□□ -0.79
SMG1-205ENST00000561947 MOXD2PA6NHM9 499 aa10.09□□□□□ -0.79
SMG1-205ENST00000561947 SDR42E2A6NKP2 422 aa10.09□□□□□ -0.79
SMG1-205ENST00000561947 IGLV3-25P01717 112 aa10.09□□□□□ -0.79
SMG1-205ENST00000561947 DHRS4L1P0CG22 281 aa10.09□□□□□ -0.79
SMG1-205ENST00000561947 PTPN3P26045 913 aa10.09□□□□□ -0.79
SMG1-205ENST00000561947 YWHAHQ04917 246 aaPredicted RBP10.09□□□□□ -0.79
SMG1-205ENST00000561947 C4orf50Q6ZRC1 276 aa10.09□□□□□ -0.79
SMG1-205ENST00000561947 CYS1Q717R9 158 aa10.09□□□□□ -0.79
SMG1-205ENST00000561947 SPATA2LQ8IUW3 424 aaPredicted RBP10.09□□□□□ -0.79
SMG1-205ENST00000561947 ZNF276Q8N554 614 aa10.09□□□□□ -0.79
SMG1-205ENST00000561947 CCDC63Q8NA47 563 aa10.09□□□□□ -0.79
SMG1-205ENST00000561947 APBB2Q92870 758 aa10.09□□□□□ -0.79
SMG1-205ENST00000561947 VPS11Q9H270 941 aa10.09□□□□□ -0.79
SMG1-205ENST00000561947 C12orf65Q9H3J6 166 aaKnown RBP10.09□□□□□ -0.79
SMG1-205ENST00000561947 KLHL8Q9P2G9 620 aaPredicted RBP10.09□□□□□ -0.79
SMG1-205ENST00000561947 OR12D3Q9UGF7 316 aa10.09□□□□□ -0.79
SMG1-205ENST00000561947 KCNK1O00180 336 aa10.08□□□□□ -0.8
SMG1-205ENST00000561947 B4GALT3O60512 393 aa10.08□□□□□ -0.8
SMG1-205ENST00000561947 UGT1A9O60656 530 aa10.08□□□□□ -0.8
SMG1-205ENST00000561947 KRT38O76015 456 aa10.08□□□□□ -0.8
SMG1-205ENST00000561947 LRIG2O94898 1065 aa10.08□□□□□ -0.8
SMG1-205ENST00000561947 UBOX5O94941 541 aa10.08□□□□□ -0.8
SMG1-205ENST00000561947 MX2P20592 715 aa10.08□□□□□ -0.8
SMG1-205ENST00000561947 MGAT1P26572 445 aa10.08□□□□□ -0.8
SMG1-205ENST00000561947 HOXD10P28358 340 aa10.08□□□□□ -0.8
SMG1-205ENST00000561947 SERPINB6P35237 376 aa10.08□□□□□ -0.8
SMG1-205ENST00000561947 ETV4P43268 484 aa10.08□□□□□ -0.8
SMG1-205ENST00000561947 DSC1Q08554 894 aa10.08□□□□□ -0.8
SMG1-205ENST00000561947 MGAT5Q09328 741 aa10.08□□□□□ -0.8
SMG1-205ENST00000561947 GALNT2Q10471 571 aa10.08□□□□□ -0.8
SMG1-205ENST00000561947 MBTPS1Q14703 1052 aa10.08□□□□□ -0.8
SMG1-205ENST00000561947 FAM133BQ5BKY9 247 aaKnown RBP10.08□□□□□ -0.8
SMG1-205ENST00000561947 CLLU1OSQ5K130 101 aa10.08□□□□□ -0.8
SMG1-205ENST00000561947 FBXW10Q5XX13 1052 aa10.08□□□□□ -0.8
SMG1-205ENST00000561947 SLC24A5Q71RS6 500 aa10.08□□□□□ -0.8
SMG1-205ENST00000561947 PID1Q7Z2X4 250 aa10.08□□□□□ -0.8
SMG1-205ENST00000561947 ZNF280BQ86YH2 543 aa10.08□□□□□ -0.8
SMG1-205ENST00000561947 CCNJLQ8IV13 435 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms