RNA–Protein interactions for RNA: ENST00000561911.5

SPG7-204, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 1,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-204ENST00000561911 VANGL2Q9ULK5 521 aa16.24■□□□□ 0.19
SPG7-204ENST00000561911 C5orf42Q9H799 3197 aa16.24■□□□□ 0.19
SPG7-204ENST00000561911 E9PAM4 449 aa16.23■□□□□ 0.19
SPG7-204ENST00000561911 FAM72CH0Y354 149 aa16.23■□□□□ 0.19
SPG7-204ENST00000561911 PSTPIP1O43586 416 aa16.23■□□□□ 0.19
SPG7-204ENST00000561911 FTCDO95954 541 aa16.23■□□□□ 0.19
SPG7-204ENST00000561911 CYBBP04839 570 aa16.23■□□□□ 0.19
SPG7-204ENST00000561911 TNNT1P13805 278 aa16.23■□□□□ 0.19
SPG7-204ENST00000561911 L1CAMP32004 1257 aa16.23■□□□□ 0.19
SPG7-204ENST00000561911 PFKPQ01813 784 aa16.23■□□□□ 0.19
SPG7-204ENST00000561911 NR1H3Q13133 447 aa16.23■□□□□ 0.19
SPG7-204ENST00000561911 SEMA3BQ13214 749 aa16.23■□□□□ 0.19
SPG7-204ENST00000561911 DPYSL2Q16555 572 aa16.23■□□□□ 0.19
SPG7-204ENST00000561911 ITPRIPL2Q3MIP1 535 aa16.23■□□□□ 0.19
SPG7-204ENST00000561911 MPPE1Q53F39 396 aa16.23■□□□□ 0.19
SPG7-204ENST00000561911 RABGAP1LQ5R372 815 aa16.23■□□□□ 0.19
SPG7-204ENST00000561911 FAM72AQ5TYM5 149 aa16.23■□□□□ 0.19
SPG7-204ENST00000561911 MANEALQ5VSG8 457 aa16.23■□□□□ 0.19
SPG7-204ENST00000561911 FAM72DQ6L9T8 149 aa16.23■□□□□ 0.19
SPG7-204ENST00000561911 LRRC31Q6UY01 552 aa16.23■□□□□ 0.19
SPG7-204ENST00000561911 PEX26Q7Z412 305 aa16.23■□□□□ 0.19
SPG7-204ENST00000561911 FAM72BQ86X60 149 aa16.23■□□□□ 0.19
SPG7-204ENST00000561911 TRIM58Q8NG06 486 aa16.23■□□□□ 0.19
SPG7-204ENST00000561911 CSGALNACT1Q8TDX6 532 aa16.23■□□□□ 0.19
SPG7-204ENST00000561911 TMA16Q96EY4 203 aaKnown RBP16.23■□□□□ 0.19
SPG7-204ENST00000561911 P2RY11Q96G91 374 aa16.23■□□□□ 0.19
SPG7-204ENST00000561911 RPRD1AQ96P16 312 aaPredicted RBP16.23■□□□□ 0.19
SPG7-204ENST00000561911 KCTD15Q96SI1 283 aaPredicted RBP16.23■□□□□ 0.19
SPG7-204ENST00000561911 EPAS1Q99814 870 aa16.23■□□□□ 0.19
SPG7-204ENST00000561911 GTSE1Q9NYZ3 720 aa16.23■□□□□ 0.19
SPG7-204ENST00000561911 AMFRQ9UKV5 643 aa16.23■□□□□ 0.19
SPG7-204ENST00000561911 DUSP12Q9UNI6 340 aa16.23■□□□□ 0.19
SPG7-204ENST00000561911 IGLV3-10A0A075B6K4 115 aa16.22■□□□□ 0.19
SPG7-204ENST00000561911 TYW5A2RUC4 315 aaKnown RBP16.22■□□□□ 0.19
SPG7-204ENST00000561911 OTOL1A6NHN0 477 aaPredicted RBP16.22■□□□□ 0.19
SPG7-204ENST00000561911 DRGXA6NNA5 263 aa16.22■□□□□ 0.19
SPG7-204ENST00000561911 HOXC11O43248 304 aaPredicted RBP16.22■□□□□ 0.19
SPG7-204ENST00000561911 SRGAP2O75044 1071 aa16.22■□□□□ 0.19
SPG7-204ENST00000561911 LRIG2O94898 1065 aa16.22■□□□□ 0.19
SPG7-204ENST00000561911 PENKP01210 267 aaPredicted RBP16.22■□□□□ 0.19
SPG7-204ENST00000561911 ADH5P11766 374 aa16.22■□□□□ 0.19
SPG7-204ENST00000561911 CTNNA2P26232 953 aa16.22■□□□□ 0.19
SPG7-204ENST00000561911 SGSHP51688 502 aa16.22■□□□□ 0.19
SPG7-204ENST00000561911 RPS24P62847 133 aaKnown RBP16.22■□□□□ 0.19
SPG7-204ENST00000561911 GAD2Q05329 585 aa16.22■□□□□ 0.19
SPG7-204ENST00000561911 ANO4Q32M45 955 aa16.22■□□□□ 0.19
SPG7-204ENST00000561911 C5orf22Q49AR2 442 aa16.22■□□□□ 0.19
SPG7-204ENST00000561911 ATP13A4Q4VNC1 1196 aa16.22■□□□□ 0.19
SPG7-204ENST00000561911 ARTNQ5T4W7 220 aa16.22■□□□□ 0.19
SPG7-204ENST00000561911 TTC39BQ5VTQ0 682 aaPredicted RBP16.22■□□□□ 0.19
SPG7-204ENST00000561911 FYB2Q5VWT5 728 aa16.22■□□□□ 0.19
SPG7-204ENST00000561911 NT5DC3Q86UY8 548 aa16.22■□□□□ 0.19
SPG7-204ENST00000561911 C17orf53Q8N3J3 647 aaPredicted RBP16.22■□□□□ 0.19
SPG7-204ENST00000561911 TTC8Q8TAM2 541 aa16.22■□□□□ 0.19
SPG7-204ENST00000561911 DDI1Q8WTU0 396 aa16.22■□□□□ 0.19
SPG7-204ENST00000561911 BHMTQ93088 406 aa16.22■□□□□ 0.19
SPG7-204ENST00000561911 IGSF8Q969P0 613 aa16.22■□□□□ 0.19
SPG7-204ENST00000561911 BBS2Q9BXC9 721 aa16.22■□□□□ 0.19
SPG7-204ENST00000561911 PCDH18Q9HCL0 1135 aa16.22■□□□□ 0.19
SPG7-204ENST00000561911 KLHL11Q9NVR0 708 aa16.22■□□□□ 0.19
SPG7-204ENST00000561911 ZKSCAN5Q9Y2L8 839 aa16.22■□□□□ 0.19
SPG7-204ENST00000561911 TTC28Q96AY4 2481 aa16.21■□□□□ 0.19
SPG7-204ENST00000561911 NEDD8-MDP1E9PL57 170 aa16.21■□□□□ 0.19
SPG7-204ENST00000561911 CREB3O43889 395 aa16.21■□□□□ 0.19
SPG7-204ENST00000561911 KIF5CO60282 957 aa16.21■□□□□ 0.19
SPG7-204ENST00000561911 TBL1XO60907 577 aa16.21■□□□□ 0.19
SPG7-204ENST00000561911 KRT1P04264 644 aa16.21■□□□□ 0.19
SPG7-204ENST00000561911 HOXD9P28356 352 aaPredicted RBP16.21■□□□□ 0.19
SPG7-204ENST00000561911 HTR7P34969 479 aa16.21■□□□□ 0.19
SPG7-204ENST00000561911 CTNNA1P35221 906 aaKnown RBP16.21■□□□□ 0.19
SPG7-204ENST00000561911 MARCKSL1P49006 195 aa16.21■□□□□ 0.19
SPG7-204ENST00000561911 IRAK1P51617 712 aa16.21■□□□□ 0.19
SPG7-204ENST00000561911 ZNF135P52742 658 aaPredicted RBP16.21■□□□□ 0.19
SPG7-204ENST00000561911 CDH6P55285 790 aa16.21■□□□□ 0.19
SPG7-204ENST00000561911 KRT81Q14533 505 aa16.21■□□□□ 0.19
SPG7-204ENST00000561911 PPP6R3Q5H9R7 873 aaPredicted RBP16.21■□□□□ 0.19
SPG7-204ENST00000561911 MPP7Q5T2T1 576 aa16.21■□□□□ 0.19
SPG7-204ENST00000561911 ZFYVE27Q5T4F4 411 aa16.21■□□□□ 0.19
SPG7-204ENST00000561911 RNF43Q68DV7 783 aa16.21■□□□□ 0.19
SPG7-204ENST00000561911 CFAP52Q8N1V2 620 aa16.21■□□□□ 0.19
SPG7-204ENST00000561911 FAM71BQ8TC56 605 aa16.21■□□□□ 0.19
SPG7-204ENST00000561911 KRT35Q92764 455 aa16.21■□□□□ 0.19
SPG7-204ENST00000561911 TBC1D31Q96DN5 1066 aa16.21■□□□□ 0.19
SPG7-204ENST00000561911 UHRF1Q96T88 793 aaPredicted RBP16.21■□□□□ 0.19
SPG7-204ENST00000561911 DDX56Q9NY93 547 aaKnown RBP16.21■□□□□ 0.19
SPG7-204ENST00000561911 PLK2Q9NYY3 685 aa16.21■□□□□ 0.19
SPG7-204ENST00000561911 PPARGC1AQ9UBK2 798 aaKnown RBP16.21■□□□□ 0.19
SPG7-204ENST00000561911 NEU3Q9UQ49 428 aa16.21■□□□□ 0.19
SPG7-204ENST00000561911 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.21■□□□□ 0.19
SPG7-204ENST00000561911 KIF26AQ9ULI4 1882 aaPredicted RBP16.2■□□□□ 0.18
SPG7-204ENST00000561911 CCDC66A2RUB6 948 aa16.2■□□□□ 0.18
SPG7-204ENST00000561911 LRRD1A4D1F6 860 aa16.2■□□□□ 0.18
SPG7-204ENST00000561911 MIF4GDA9UHW6 222 aaKnown RBP16.2■□□□□ 0.18
SPG7-204ENST00000561911 H3BRJ5 948 aa16.2■□□□□ 0.18
SPG7-204ENST00000561911 EEF2KO00418 725 aaKnown RBP16.2■□□□□ 0.18
SPG7-204ENST00000561911 TYRP14679 529 aa16.2■□□□□ 0.18
SPG7-204ENST00000561911 HOXC13P31276 330 aa16.2■□□□□ 0.18
SPG7-204ENST00000561911 GJA4P35212 333 aa16.2■□□□□ 0.18
SPG7-204ENST00000561911 ARSEP51690 589 aa16.2■□□□□ 0.18
SPG7-204ENST00000561911 TPI1P60174 286 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms