RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 BCAT1P54687 386 aa11.29□□□□□ -0.6
NEIL1-202ENST00000561643 AQP5P55064 265 aa11.29□□□□□ -0.6
NEIL1-202ENST00000561643 SLC34A1Q06495 639 aa11.29□□□□□ -0.6
NEIL1-202ENST00000561643 ARHGAP17Q68EM7 881 aa11.29□□□□□ -0.6
NEIL1-202ENST00000561643 ZNF410Q86VK4 478 aa11.29□□□□□ -0.6
NEIL1-202ENST00000561643 UNC93AQ86WB7 457 aa11.29□□□□□ -0.6
NEIL1-202ENST00000561643 FAM131BQ86XD5 332 aa11.29□□□□□ -0.6
NEIL1-202ENST00000561643 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.29□□□□□ -0.6
NEIL1-202ENST00000561643 STKLD1Q8NE28 680 aa11.29□□□□□ -0.6
NEIL1-202ENST00000561643 TFB1MQ8WVM0 346 aaKnown RBP11.29□□□□□ -0.6
NEIL1-202ENST00000561643 HTR3CQ8WXA8 447 aa11.29□□□□□ -0.6
NEIL1-202ENST00000561643 STMN2Q93045 179 aa11.29□□□□□ -0.6
NEIL1-202ENST00000561643 HIC2Q96JB3 615 aa11.29□□□□□ -0.6
NEIL1-202ENST00000561643 SNX27Q96L92 541 aa11.29□□□□□ -0.6
NEIL1-202ENST00000561643 RILPQ96NA2 401 aa11.29□□□□□ -0.6
NEIL1-202ENST00000561643 EIF2AQ9BY44 585 aaKnown RBP11.29□□□□□ -0.6
NEIL1-202ENST00000561643 GCOM2Q9BZD3 368 aaPredicted RBP11.29□□□□□ -0.6
NEIL1-202ENST00000561643 VTA1Q9NP79 307 aa11.29□□□□□ -0.6
NEIL1-202ENST00000561643 MKS1Q9NXB0 559 aa11.29□□□□□ -0.6
NEIL1-202ENST00000561643 MTMR10Q9NXD2 777 aa11.29□□□□□ -0.6
NEIL1-202ENST00000561643 TMCO1Q9UM00 188 aa11.29□□□□□ -0.6
NEIL1-202ENST00000561643 ZNF510Q9Y2H8 683 aa11.29□□□□□ -0.6
NEIL1-202ENST00000561643 WDR27A2RRH5 827 aa11.28□□□□□ -0.6
NEIL1-202ENST00000561643 H3BRJ5 948 aa11.28□□□□□ -0.6
NEIL1-202ENST00000561643 BPGMP07738 259 aa11.28□□□□□ -0.6
NEIL1-202ENST00000561643 ADORA2AP29274 412 aa11.28□□□□□ -0.6
NEIL1-202ENST00000561643 CRHR1P34998 444 aa11.28□□□□□ -0.6
NEIL1-202ENST00000561643 CRADDP78560 199 aa11.28□□□□□ -0.6
NEIL1-202ENST00000561643 SEMA5AQ13591 1074 aa11.28□□□□□ -0.6
NEIL1-202ENST00000561643 NCBP2-AS2Q69YL0 99 aa11.28□□□□□ -0.6
NEIL1-202ENST00000561643 ZCCHC23Q6ZST2 131 aa11.28□□□□□ -0.6
NEIL1-202ENST00000561643 UNC5BQ8IZJ1 945 aa11.28□□□□□ -0.6
NEIL1-202ENST00000561643 ARHGAP24Q8N264 748 aa11.28□□□□□ -0.6
NEIL1-202ENST00000561643 PYROXD2Q8N2H3 581 aa11.28□□□□□ -0.6
NEIL1-202ENST00000561643 LRRC52Q8N7C0 313 aa11.28□□□□□ -0.6
NEIL1-202ENST00000561643 PDCD7Q8N8D1 485 aaKnown RBP11.28□□□□□ -0.6
NEIL1-202ENST00000561643 ANKRD52Q8NB46 1076 aa11.28□□□□□ -0.6
NEIL1-202ENST00000561643 MIPOL1Q8TD10 442 aa11.28□□□□□ -0.6
NEIL1-202ENST00000561643 FAM149B1Q96BN6 582 aa11.28□□□□□ -0.6
NEIL1-202ENST00000561643 ZNF408Q9H9D4 720 aa11.28□□□□□ -0.6
NEIL1-202ENST00000561643 PIH1D1Q9NWS0 290 aaKnown RBP11.28□□□□□ -0.6
NEIL1-202ENST00000561643 DERAQ9Y315 318 aa11.28□□□□□ -0.6
NEIL1-202ENST00000561643 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.28□□□□□ -0.6
NEIL1-202ENST00000561643 HMX2A2RU54 273 aa11.28□□□□□ -0.6
NEIL1-202ENST00000561643 B2RBV5 119 aa11.28□□□□□ -0.6
NEIL1-202ENST00000561643 TOMM70O94826 608 aa11.28□□□□□ -0.6
NEIL1-202ENST00000561643 RARBP10826 455 aa11.28□□□□□ -0.6
NEIL1-202ENST00000561643 NAT1P18440 290 aa11.28□□□□□ -0.6
NEIL1-202ENST00000561643 PGM1P36871 562 aa11.28□□□□□ -0.6
NEIL1-202ENST00000561643 SESN2P58004 480 aaPredicted RBP11.28□□□□□ -0.6
NEIL1-202ENST00000561643 STX3Q13277 289 aa11.28□□□□□ -0.6
NEIL1-202ENST00000561643 SMAD1Q15797 465 aaKnown RBP11.28□□□□□ -0.6
NEIL1-202ENST00000561643 OLFML2BQ68BL8 750 aa11.28□□□□□ -0.6
NEIL1-202ENST00000561643 SLC27A1Q6PCB7 646 aa11.28□□□□□ -0.6
NEIL1-202ENST00000561643 MAMDC4Q6UXC1 1216 aa11.28□□□□□ -0.6
NEIL1-202ENST00000561643 NETO2Q8NC67 525 aa11.28□□□□□ -0.6
NEIL1-202ENST00000561643 SHCBP1Q8NEM2 672 aa11.28□□□□□ -0.6
NEIL1-202ENST00000561643 CDCA5Q96FF9 252 aa11.28□□□□□ -0.6
NEIL1-202ENST00000561643 LGMNQ99538 433 aa11.28□□□□□ -0.6
NEIL1-202ENST00000561643 KRT82Q9NSB4 513 aa11.28□□□□□ -0.6
NEIL1-202ENST00000561643 SETD4Q9NVD3 440 aa11.28□□□□□ -0.6
NEIL1-202ENST00000561643 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.28□□□□□ -0.6
NEIL1-202ENST00000561643 TRIP11Q15643 1979 aa11.27□□□□□ -0.6
NEIL1-202ENST00000561643 SYNJ2BP-COX16A0A087WUM0 186 aa11.27□□□□□ -0.6
NEIL1-202ENST00000561643 PENKP01210 267 aaPredicted RBP11.27□□□□□ -0.6
NEIL1-202ENST00000561643 HOXA11P31270 313 aaPredicted RBP11.27□□□□□ -0.6
NEIL1-202ENST00000561643 GNL1P36915 607 aaPredicted RBP11.27□□□□□ -0.6
NEIL1-202ENST00000561643 LSAMPQ13449 338 aa11.27□□□□□ -0.6
NEIL1-202ENST00000561643 LIN52Q52LA3 116 aa11.27□□□□□ -0.6
NEIL1-202ENST00000561643 TEX44Q53QW1 395 aa11.27□□□□□ -0.6
NEIL1-202ENST00000561643 MARCH8Q5T0T0 291 aa11.27□□□□□ -0.6
NEIL1-202ENST00000561643 C9orf57Q5W0N0 161 aa11.27□□□□□ -0.6
NEIL1-202ENST00000561643 CES4AQ5XG92 561 aa11.27□□□□□ -0.6
NEIL1-202ENST00000561643 DPY19L2Q6NUT2 758 aa11.27□□□□□ -0.6
NEIL1-202ENST00000561643 WDR60Q8WVS4 1066 aa11.27□□□□□ -0.6
NEIL1-202ENST00000561643 CENPIQ92674 756 aaPredicted RBP11.27□□□□□ -0.6
NEIL1-202ENST00000561643 CDKL2Q92772 493 aa11.27□□□□□ -0.6
NEIL1-202ENST00000561643 ZNF184Q99676 751 aaPredicted RBP11.27□□□□□ -0.6
NEIL1-202ENST00000561643 C11orf84Q9BUA3 381 aaPredicted RBP11.27□□□□□ -0.6
NEIL1-202ENST00000561643 SNX25Q9H3E2 840 aa11.27□□□□□ -0.6
NEIL1-202ENST00000561643 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.27□□□□□ -0.6
NEIL1-202ENST00000561643 COX16Q9P0S2 106 aa11.27□□□□□ -0.6
NEIL1-202ENST00000561643 SEPT10Q9P0V9 454 aa11.27□□□□□ -0.6
NEIL1-202ENST00000561643 SLC17A6Q9P2U8 582 aa11.27□□□□□ -0.6
NEIL1-202ENST00000561643 A0A0A0MRY4 1105 aa11.27□□□□□ -0.61
NEIL1-202ENST00000561643 RECQL4O94761 1208 aa11.27□□□□□ -0.61
NEIL1-202ENST00000561643 STK10O94804 968 aaKnown RBP11.27□□□□□ -0.61
NEIL1-202ENST00000561643 PSMG1O95456 288 aa11.27□□□□□ -0.61
NEIL1-202ENST00000561643 VAV1P15498 845 aa11.27□□□□□ -0.61
NEIL1-202ENST00000561643 AKAP5P24588 427 aa11.27□□□□□ -0.61
NEIL1-202ENST00000561643 LMO2P25791 158 aa11.27□□□□□ -0.61
NEIL1-202ENST00000561643 SULT1E1P49888 294 aa11.27□□□□□ -0.61
NEIL1-202ENST00000561643 ALDH18A1P54886 795 aaKnown RBP11.27□□□□□ -0.61
NEIL1-202ENST00000561643 KDSRQ06136 332 aa11.27□□□□□ -0.61
NEIL1-202ENST00000561643 AP1B1Q10567 949 aa11.27□□□□□ -0.61
NEIL1-202ENST00000561643 FBXO47Q5MNV8 452 aa11.27□□□□□ -0.61
NEIL1-202ENST00000561643 ARHGAP18Q8N392 663 aa11.27□□□□□ -0.61
NEIL1-202ENST00000561643 COLGALT1Q8NBJ5 622 aa11.27□□□□□ -0.61
NEIL1-202ENST00000561643 SLC2A14Q8TDB8 520 aa11.27□□□□□ -0.61
NEIL1-202ENST00000561643 ABTB1Q969K4 478 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms