RNA–Protein interactions for RNA: ENST00000561059.5

PSME1-208, Transcript of proteasome activator subunit 1, human

TSL 2

Gene PSME1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSME1-208	ENST00000561059	NAALADL1	Q9UQQ1	740 aa		13.93	□□□□□ -0.18
PSME1-208	ENST00000561059	BTBD3	Q9Y2F9	522 aa		13.93	□□□□□ -0.18
PSME1-208	ENST00000561059	TMEM8B	A6NDV4	472 aa		13.92	□□□□□ -0.18
PSME1-208	ENST00000561059	FAM47DP	A6NHR8	397 aa		13.92	□□□□□ -0.18
PSME1-208	ENST00000561059	PSMA7	O14818	248 aa		13.92	□□□□□ -0.18
PSME1-208	ENST00000561059	ACSL4	O60488	711 aa		13.92	□□□□□ -0.18
PSME1-208	ENST00000561059	IGLV3-27	P01718	113 aa		13.92	□□□□□ -0.18
PSME1-208	ENST00000561059	FYN	P06241	537 aa		13.92	□□□□□ -0.18
PSME1-208	ENST00000561059	PAEP	P09466	180 aa		13.92	□□□□□ -0.18
PSME1-208	ENST00000561059	DLD	P09622	509 aa	Known RBP	13.92	□□□□□ -0.18
PSME1-208	ENST00000561059	POLR2E	P19388	210 aa	Known RBP	13.92	□□□□□ -0.18
PSME1-208	ENST00000561059	BMP6	P22004	513 aa		13.92	□□□□□ -0.18
PSME1-208	ENST00000561059	MATK	P42679	507 aa		13.92	□□□□□ -0.18
PSME1-208	ENST00000561059	CTSO	P43234	321 aa	Predicted RBP	13.92	□□□□□ -0.18
PSME1-208	ENST00000561059	IL9R	Q01113	521 aa		13.92	□□□□□ -0.18
PSME1-208	ENST00000561059	CNGA2	Q16280	664 aa		13.92	□□□□□ -0.18
PSME1-208	ENST00000561059	ZNF423	Q2M1K9	1284 aa		13.92	□□□□□ -0.18
PSME1-208	ENST00000561059	CCDC157	Q569K6	752 aa		13.92	□□□□□ -0.18
PSME1-208	ENST00000561059	KCNT1	Q5JUK3	1230 aa		13.92	□□□□□ -0.18
PSME1-208	ENST00000561059	DENND1B	Q6P3S1	775 aa		13.92	□□□□□ -0.18
PSME1-208	ENST00000561059	MFN1	Q8IWA4	741 aa		13.92	□□□□□ -0.18
PSME1-208	ENST00000561059	SCUBE3	Q8IX30	993 aa		13.92	□□□□□ -0.18
PSME1-208	ENST00000561059	CARNMT1	Q8N4J0	409 aa		13.92	□□□□□ -0.18
PSME1-208	ENST00000561059	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	13.92	□□□□□ -0.18
PSME1-208	ENST00000561059	C1orf216	Q8TAB5	229 aa		13.92	□□□□□ -0.18
PSME1-208	ENST00000561059	LMO3	Q8TAP4	145 aa		13.92	□□□□□ -0.18
PSME1-208	ENST00000561059	DQX1	Q8TE96	717 aa	Known RBP	13.92	□□□□□ -0.18
PSME1-208	ENST00000561059	GANC	Q8TET4	914 aa		13.92	□□□□□ -0.18
PSME1-208	ENST00000561059	NELFB	Q8WX92	580 aa		13.92	□□□□□ -0.18
PSME1-208	ENST00000561059	ZDHHC5	Q9C0B5	715 aa		13.92	□□□□□ -0.18
PSME1-208	ENST00000561059	NUCKS1	Q9H1E3	243 aa	Known RBP	13.92	□□□□□ -0.18
PSME1-208	ENST00000561059	ST7	Q9NRC1	585 aa		13.92	□□□□□ -0.18
PSME1-208	ENST00000561059	TM7SF3	Q9NS93	570 aa		13.92	□□□□□ -0.18
PSME1-208	ENST00000561059	XPO7	Q9UIA9	1087 aa	Known RBP	13.92	□□□□□ -0.18
PSME1-208	ENST00000561059	KIAA1257	Q9ULG3	409 aa		13.92	□□□□□ -0.18
PSME1-208	ENST00000561059	CTNND2	Q9UQB3	1225 aa		13.92	□□□□□ -0.18
PSME1-208	ENST00000561059	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	13.92	□□□□□ -0.18
PSME1-208	ENST00000561059	SNX11	Q9Y5W9	270 aa		13.92	□□□□□ -0.18
PSME1-208	ENST00000561059	MUC22	E2RYF6	1773 aa	Predicted RBP	13.91	□□□□□ -0.18
PSME1-208	ENST00000561059		H0Y626	953 aa		13.91	□□□□□ -0.18
PSME1-208	ENST00000561059	CBFA2T3	O75081	653 aa		13.91	□□□□□ -0.18
PSME1-208	ENST00000561059	TRIM16	O95361	564 aa		13.91	□□□□□ -0.18
PSME1-208	ENST00000561059	SEMA4F	O95754	770 aa		13.91	□□□□□ -0.18
PSME1-208	ENST00000561059	ATXN1L	P0C7T5	689 aa	Known RBP	13.91	□□□□□ -0.18
PSME1-208	ENST00000561059	KRT5	P13647	590 aa		13.91	□□□□□ -0.18
PSME1-208	ENST00000561059	RDX	P35241	583 aa	Known RBP	13.91	□□□□□ -0.18
PSME1-208	ENST00000561059	CSK	P41240	450 aa		13.91	□□□□□ -0.18
PSME1-208	ENST00000561059	SLC11A2	P49281	568 aa		13.91	□□□□□ -0.18
PSME1-208	ENST00000561059	SCAP	Q12770	1279 aa		13.91	□□□□□ -0.18
PSME1-208	ENST00000561059	FSCB	Q5H9T9	825 aa		13.91	□□□□□ -0.18
PSME1-208	ENST00000561059	TTI2	Q6NXR4	508 aa		13.91	□□□□□ -0.18
PSME1-208	ENST00000561059	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	13.91	□□□□□ -0.18
PSME1-208	ENST00000561059	TAC4	Q86UU9	113 aa		13.91	□□□□□ -0.18
PSME1-208	ENST00000561059	DHX40	Q8IX18	779 aa	Known RBP	13.91	□□□□□ -0.18
PSME1-208	ENST00000561059	FAM149B1	Q96BN6	582 aa		13.91	□□□□□ -0.18
PSME1-208	ENST00000561059	BIRC7	Q96CA5	298 aa		13.91	□□□□□ -0.18
PSME1-208	ENST00000561059	LMLN	Q96KR4	655 aa		13.91	□□□□□ -0.18
PSME1-208	ENST00000561059	FCRL2	Q96LA5	508 aa	Predicted RBP	13.91	□□□□□ -0.18
PSME1-208	ENST00000561059	KREMEN1	Q96MU8	473 aa		13.91	□□□□□ -0.18
PSME1-208	ENST00000561059	METTL14	Q9HCE5	456 aa	Known RBP	13.91	□□□□□ -0.18
PSME1-208	ENST00000561059	TM9SF3	Q9HD45	589 aa		13.91	□□□□□ -0.18
PSME1-208	ENST00000561059	ACP6	Q9NPH0	428 aa		13.91	□□□□□ -0.18
PSME1-208	ENST00000561059	SERGEF	Q9UGK8	458 aa		13.91	□□□□□ -0.18
PSME1-208	ENST00000561059	INTS6	Q9UL03	887 aa	Known RBP	13.91	□□□□□ -0.18
PSME1-208	ENST00000561059	ATRX	P46100	2492 aa		13.91	□□□□□ -0.18
PSME1-208	ENST00000561059	CKAP5	Q14008	2032 aa		13.91	□□□□□ -0.18
PSME1-208	ENST00000561059	KNL1	Q8NG31	2342 aa		13.91	□□□□□ -0.18
PSME1-208	ENST00000561059	PPP1R3G	B7ZBB8	358 aa		13.9	□□□□□ -0.18
PSME1-208	ENST00000561059	SIN3B	O75182	1162 aa		13.9	□□□□□ -0.18
PSME1-208	ENST00000561059	CER1	O95813	267 aa		13.9	□□□□□ -0.18
PSME1-208	ENST00000561059	LATS1	O95835	1130 aa		13.9	□□□□□ -0.18
PSME1-208	ENST00000561059	DNTT	P04053	509 aa		13.9	□□□□□ -0.18
PSME1-208	ENST00000561059	ATP5B	P06576	529 aa	Known RBP	13.9	□□□□□ -0.18
PSME1-208	ENST00000561059	AFF3	P51826	1226 aa	Known RBP	13.9	□□□□□ -0.18
PSME1-208	ENST00000561059	PITX1	P78337	314 aa	Predicted RBP	13.9	□□□□□ -0.18
PSME1-208	ENST00000561059	RING1	Q06587	406 aa		13.9	□□□□□ -0.18
PSME1-208	ENST00000561059	STIM1	Q13586	685 aa		13.9	□□□□□ -0.18
PSME1-208	ENST00000561059	E2F5	Q15329	346 aa		13.9	□□□□□ -0.18
PSME1-208	ENST00000561059	DCAF6	Q58WW2	860 aa		13.9	□□□□□ -0.18
PSME1-208	ENST00000561059	PRAMEF14	Q5SWL7	426 aa		13.9	□□□□□ -0.18
PSME1-208	ENST00000561059	SYPL2	Q5VXT5	272 aa		13.9	□□□□□ -0.18
PSME1-208	ENST00000561059	UNC45B	Q8IWX7	931 aa		13.9	□□□□□ -0.18
PSME1-208	ENST00000561059	RHBDD1	Q8TEB9	315 aa		13.9	□□□□□ -0.18
PSME1-208	ENST00000561059	ADAMTS14	Q8WXS8	1223 aa		13.9	□□□□□ -0.18
PSME1-208	ENST00000561059	IRGQ	Q8WZA9	623 aa		13.9	□□□□□ -0.18
PSME1-208	ENST00000561059	GOLGA1	Q92805	767 aa		13.9	□□□□□ -0.18
PSME1-208	ENST00000561059	MYO19	Q96H55	970 aa		13.9	□□□□□ -0.18
PSME1-208	ENST00000561059	DHTKD1	Q96HY7	919 aa	Predicted RBP	13.9	□□□□□ -0.18
PSME1-208	ENST00000561059	CEP63	Q96MT8	703 aa		13.9	□□□□□ -0.18
PSME1-208	ENST00000561059	BTBD1	Q9H0C5	482 aa		13.9	□□□□□ -0.18
PSME1-208	ENST00000561059	ANKRD6	Q9Y2G4	727 aa		13.9	□□□□□ -0.18
PSME1-208	ENST00000561059	NFE2L3	Q9Y4A8	694 aa		13.9	□□□□□ -0.18
PSME1-208	ENST00000561059	TTC34	A8MYJ7	566 aa		13.89	□□□□□ -0.19
PSME1-208	ENST00000561059	MID1	O15344	667 aa		13.89	□□□□□ -0.19
PSME1-208	ENST00000561059	GADD45B	O75293	160 aa	Predicted RBP	13.89	□□□□□ -0.19
PSME1-208	ENST00000561059	ZNF445	P59923	1031 aa		13.89	□□□□□ -0.19
PSME1-208	ENST00000561059	APBA1	Q02410	837 aa		13.89	□□□□□ -0.19
PSME1-208	ENST00000561059	KCNH2	Q12809	1159 aa		13.89	□□□□□ -0.19
PSME1-208	ENST00000561059	HNRNPD	Q14103	355 aa	Known RBP	13.89	□□□□□ -0.19
PSME1-208	ENST00000561059	TAF5	Q15542	800 aa		13.89	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms