RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 MTSS1O43312 755 aa17.65■□□□□ 0.42
HDDC3-206ENST00000561036 RIPK2O43353 540 aa17.65■□□□□ 0.42
HDDC3-206ENST00000561036 IGLV3-27P01718 113 aa17.65■□□□□ 0.42
HDDC3-206ENST00000561036 LINC00271P0C7V0 271 aa17.65■□□□□ 0.42
HDDC3-206ENST00000561036 CTSAP10619 480 aa17.65■□□□□ 0.42
HDDC3-206ENST00000561036 ELF1P32519 619 aa17.65■□□□□ 0.42
HDDC3-206ENST00000561036 MLLT6P55198 1093 aaPredicted RBP17.65■□□□□ 0.42
HDDC3-206ENST00000561036 EFEMP1Q12805 493 aa17.65■□□□□ 0.42
HDDC3-206ENST00000561036 CENPUQ71F23 418 aa17.65■□□□□ 0.42
HDDC3-206ENST00000561036 HERC6Q8IVU3 1022 aa17.65■□□□□ 0.42
HDDC3-206ENST00000561036 ATP6V0D2Q8N8Y2 350 aa17.65■□□□□ 0.42
HDDC3-206ENST00000561036 TTC25Q96NG3 672 aa17.65■□□□□ 0.42
HDDC3-206ENST00000561036 RBM15Q96T37 977 aaKnown RBP eCLIP17.65■□□□□ 0.42
HDDC3-206ENST00000561036 TMEM109Q9BVC6 243 aa17.65■□□□□ 0.42
HDDC3-206ENST00000561036 KLC2Q9H0B6 622 aa17.65■□□□□ 0.42
HDDC3-206ENST00000561036 MTIF3Q9H2K0 278 aaKnown RBP17.65■□□□□ 0.42
HDDC3-206ENST00000561036 DONSONQ9NYP3 566 aa17.65■□□□□ 0.42
HDDC3-206ENST00000561036 LZTS1Q9Y250 596 aa17.65■□□□□ 0.42
HDDC3-206ENST00000561036 MFHAS1Q9Y4C4 1052 aa17.65■□□□□ 0.42
HDDC3-206ENST00000561036 YIPF1Q9Y548 306 aa17.65■□□□□ 0.42
HDDC3-206ENST00000561036 SLC4A7Q9Y6M7 1214 aa17.65■□□□□ 0.42
HDDC3-206ENST00000561036 ZNF638Q14966 1978 aaKnown RBP17.64■□□□□ 0.41
HDDC3-206ENST00000561036 KIAA1671Q9BY89 1806 aa17.64■□□□□ 0.41
HDDC3-206ENST00000561036 RNF40O75150 1001 aa17.64■□□□□ 0.41
HDDC3-206ENST00000561036 TTC4O95801 387 aa17.64■□□□□ 0.41
HDDC3-206ENST00000561036 HMGA1P17096 107 aaKnown RBP17.64■□□□□ 0.41
HDDC3-206ENST00000561036 TUBP50607 506 aa17.64■□□□□ 0.41
HDDC3-206ENST00000561036 ARL4CP56559 192 aa17.64■□□□□ 0.41
HDDC3-206ENST00000561036 COG7P83436 770 aa17.64■□□□□ 0.41
HDDC3-206ENST00000561036 ZNF844Q08AG5 666 aa17.64■□□□□ 0.41
HDDC3-206ENST00000561036 IFFO1Q0D2I5 559 aa17.64■□□□□ 0.41
HDDC3-206ENST00000561036 GALNT2Q10471 571 aa17.64■□□□□ 0.41
HDDC3-206ENST00000561036 PLD1Q13393 1074 aa17.64■□□□□ 0.41
HDDC3-206ENST00000561036 CEP85LQ5SZL2 805 aa17.64■□□□□ 0.41
HDDC3-206ENST00000561036 C7orf61Q8IZ16 206 aa17.64■□□□□ 0.41
HDDC3-206ENST00000561036 BTN2A3PQ96KV6 586 aa17.64■□□□□ 0.41
HDDC3-206ENST00000561036 SIK2Q9H0K1 926 aa17.64■□□□□ 0.41
HDDC3-206ENST00000561036 CDC42EP4Q9H3Q1 356 aaKnown RBP17.64■□□□□ 0.41
HDDC3-206ENST00000561036 PRDM12Q9H4Q4 367 aa17.64■□□□□ 0.41
HDDC3-206ENST00000561036 UXTQ9UBK9 157 aaPredicted RBP17.64■□□□□ 0.41
HDDC3-206ENST00000561036 DNMT3LQ9UJW3 386 aa17.64■□□□□ 0.41
HDDC3-206ENST00000561036 NUDT5Q9UKK9 219 aa17.64■□□□□ 0.41
HDDC3-206ENST00000561036 MAGED2Q9UNF1 606 aaPredicted RBP17.64■□□□□ 0.41
HDDC3-206ENST00000561036 NEU3Q9UQ49 428 aa17.64■□□□□ 0.41
HDDC3-206ENST00000561036 RWDD3Q9Y3V2 267 aa17.64■□□□□ 0.41
HDDC3-206ENST00000561036 SNX10Q9Y5X0 201 aa17.64■□□□□ 0.41
HDDC3-206ENST00000561036 ALPK3Q96L96 1907 aa17.64■□□□□ 0.41
HDDC3-206ENST00000561036 A0A0A0MRY4 1105 aa17.63■□□□□ 0.41
HDDC3-206ENST00000561036 WASH4PA8MWX3 477 aa17.63■□□□□ 0.41
HDDC3-206ENST00000561036 PRRG1O14668 218 aa17.63■□□□□ 0.41
HDDC3-206ENST00000561036 ALOX15BO15296 676 aa17.63■□□□□ 0.41
HDDC3-206ENST00000561036 TLR5O60602 858 aa17.63■□□□□ 0.41
HDDC3-206ENST00000561036 OPHN1O60890 802 aa17.63■□□□□ 0.41
HDDC3-206ENST00000561036 ABHD2P08910 425 aa17.63■□□□□ 0.41
HDDC3-206ENST00000561036 MYZAPP0CAP1 466 aa17.63■□□□□ 0.41
HDDC3-206ENST00000561036 ATP5C1P36542 298 aaKnown RBP17.63■□□□□ 0.41
HDDC3-206ENST00000561036 FDFT1P37268 417 aa17.63■□□□□ 0.41
HDDC3-206ENST00000561036 MAGEA4P43358 317 aa17.63■□□□□ 0.41
HDDC3-206ENST00000561036 EPHB3P54753 998 aa17.63■□□□□ 0.41
HDDC3-206ENST00000561036 BASP1P80723 227 aaKnown RBP17.63■□□□□ 0.41
HDDC3-206ENST00000561036 CBX1P83916 185 aa17.63■□□□□ 0.41
HDDC3-206ENST00000561036 PPIDQ08752 370 aaKnown RBP17.63■□□□□ 0.41
HDDC3-206ENST00000561036 SLC29A2Q14542 456 aa17.63■□□□□ 0.41
HDDC3-206ENST00000561036 KCNJ11Q14654 390 aa17.63■□□□□ 0.41
HDDC3-206ENST00000561036 HIF1AQ16665 826 aa17.63■□□□□ 0.41
HDDC3-206ENST00000561036 HECTD3Q5T447 861 aa17.63■□□□□ 0.41
HDDC3-206ENST00000561036 LRRC49Q8IUZ0 686 aa17.63■□□□□ 0.41
HDDC3-206ENST00000561036 HDAC11Q96DB2 347 aa17.63■□□□□ 0.41
HDDC3-206ENST00000561036 SPATA13Q96N96 652 aa17.63■□□□□ 0.41
HDDC3-206ENST00000561036 TMBIM4Q9HC24 238 aa17.63■□□□□ 0.41
HDDC3-206ENST00000561036 RAB6BQ9NRW1 208 aa17.63■□□□□ 0.41
HDDC3-206ENST00000561036 TRPM5Q9NZQ8 1165 aa17.63■□□□□ 0.41
HDDC3-206ENST00000561036 CXXC1Q9P0U4 656 aaPredicted RBP17.63■□□□□ 0.41
HDDC3-206ENST00000561036 PPARGC1AQ9UBK2 798 aaKnown RBP17.63■□□□□ 0.41
HDDC3-206ENST00000561036 ASB3Q9Y575 518 aa17.63■□□□□ 0.41
HDDC3-206ENST00000561036 HS3ST4Q9Y661 456 aa17.63■□□□□ 0.41
HDDC3-206ENST00000561036 SLC12A8A0AV02 714 aa17.62■□□□□ 0.41
HDDC3-206ENST00000561036 ZNF840PA6NDX5 716 aa17.62■□□□□ 0.41
HDDC3-206ENST00000561036 E7ESA3 106 aa17.62■□□□□ 0.41
HDDC3-206ENST00000561036 TEX28O15482 410 aa17.62■□□□□ 0.41
HDDC3-206ENST00000561036 MAP3K6O95382 1288 aa17.62■□□□□ 0.41
HDDC3-206ENST00000561036 SRGAP2BP0DMP2 458 aa17.62■□□□□ 0.41
HDDC3-206ENST00000561036 VAV1P15498 845 aa17.62■□□□□ 0.41
HDDC3-206ENST00000561036 TSHRP16473 764 aa17.62■□□□□ 0.41
HDDC3-206ENST00000561036 CDK16Q00536 496 aa17.62■□□□□ 0.41
HDDC3-206ENST00000561036 TAF12Q16514 161 aa17.62■□□□□ 0.41
HDDC3-206ENST00000561036 ARTNQ5T4W7 220 aa17.62■□□□□ 0.41
HDDC3-206ENST00000561036 ANKRD22Q5VYY1 191 aa17.62■□□□□ 0.41
HDDC3-206ENST00000561036 NUGGCQ68CJ6 796 aa17.62■□□□□ 0.41
HDDC3-206ENST00000561036 RWDD4Q6NW29 188 aaKnown RBP17.62■□□□□ 0.41
HDDC3-206ENST00000561036 LRRC31Q6UY01 552 aa17.62■□□□□ 0.41
HDDC3-206ENST00000561036 ARHGEF18Q6ZSZ5 1173 aa17.62■□□□□ 0.41
HDDC3-206ENST00000561036 B4GALNT4Q76KP1 1039 aa17.62■□□□□ 0.41
HDDC3-206ENST00000561036 ITIH5Q86UX2 942 aa17.62■□□□□ 0.41
HDDC3-206ENST00000561036 PDIK1LQ8N165 341 aa17.62■□□□□ 0.41
HDDC3-206ENST00000561036 MCUQ8NE86 351 aa17.62■□□□□ 0.41
HDDC3-206ENST00000561036 CCDC110Q8TBZ0 833 aa17.62■□□□□ 0.41
HDDC3-206ENST00000561036 EXOC4Q96A65 974 aa17.62■□□□□ 0.41
HDDC3-206ENST00000561036 P2RY11Q96G91 374 aa17.62■□□□□ 0.41
HDDC3-206ENST00000561036 ZNF512Q96ME7 567 aaPredicted RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms