RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 PRKCEQ02156 737 aa16.92■□□□□ 0.3
TPM1-228ENST00000560975 TRPC3Q13507 836 aa16.92■□□□□ 0.3
TPM1-228ENST00000560975 USP41Q3LFD5 358 aa16.92■□□□□ 0.3
TPM1-228ENST00000560975 EPGNQ6UW88 154 aa16.92■□□□□ 0.3
TPM1-228ENST00000560975 C16orf89Q6UX73 402 aa16.92■□□□□ 0.3
TPM1-228ENST00000560975 PACS1Q6VY07 963 aa16.92■□□□□ 0.3
TPM1-228ENST00000560975 NAPRTQ6XQN6 538 aa16.92■□□□□ 0.3
TPM1-228ENST00000560975 TIFABQ6ZNK6 161 aa16.92■□□□□ 0.3
TPM1-228ENST00000560975 CPNE9Q8IYJ1 553 aa16.92■□□□□ 0.3
TPM1-228ENST00000560975 LRRC43Q8N309 656 aa16.92■□□□□ 0.3
TPM1-228ENST00000560975 TMEM130Q8N3G9 435 aa16.92■□□□□ 0.3
TPM1-228ENST00000560975 RNF157Q96PX1 679 aa16.92■□□□□ 0.3
TPM1-228ENST00000560975 TCHPQ9BT92 498 aa16.92■□□□□ 0.3
TPM1-228ENST00000560975 SLC4A5Q9BY07 1137 aa16.92■□□□□ 0.3
TPM1-228ENST00000560975 FRMD8Q9BZ67 464 aaPredicted RBP16.92■□□□□ 0.3
TPM1-228ENST00000560975 FAM96AQ9H5X1 160 aa16.92■□□□□ 0.3
TPM1-228ENST00000560975 TCF7L2Q9NQB0 619 aa16.92■□□□□ 0.3
TPM1-228ENST00000560975 FEM1BQ9UK73 627 aa16.92■□□□□ 0.3
TPM1-228ENST00000560975 CLEC11AQ9Y240 323 aa16.92■□□□□ 0.3
TPM1-228ENST00000560975 ARHGEF37A1IGU5 675 aa16.92■□□□□ 0.3
TPM1-228ENST00000560975 CPA3P15088 417 aa16.92■□□□□ 0.3
TPM1-228ENST00000560975 ZNF23P17027 643 aa16.92■□□□□ 0.3
TPM1-228ENST00000560975 TYK2P29597 1187 aa16.92■□□□□ 0.3
TPM1-228ENST00000560975 CDH5P33151 784 aaPredicted RBP16.92■□□□□ 0.3
TPM1-228ENST00000560975 NDST2P52849 883 aa16.92■□□□□ 0.3
TPM1-228ENST00000560975 CDH8P55286 799 aa16.92■□□□□ 0.3
TPM1-228ENST00000560975 TFAMQ00059 246 aaKnown RBP16.92■□□□□ 0.3
TPM1-228ENST00000560975 Q6ZNX1 250 aa16.92■□□□□ 0.3
TPM1-228ENST00000560975 ANKRD23Q86SG2 305 aa16.92■□□□□ 0.3
TPM1-228ENST00000560975 ALDH16A1Q8IZ83 802 aa16.92■□□□□ 0.3
TPM1-228ENST00000560975 PQLC3Q8N755 202 aa16.92■□□□□ 0.3
TPM1-228ENST00000560975 TMA16Q96EY4 203 aaKnown RBP16.92■□□□□ 0.3
TPM1-228ENST00000560975 ADPGKQ9BRR6 497 aa16.92■□□□□ 0.3
TPM1-228ENST00000560975 SLC2A11Q9BYW1 496 aa16.92■□□□□ 0.3
TPM1-228ENST00000560975 CDH19Q9H159 772 aa16.92■□□□□ 0.3
TPM1-228ENST00000560975 PCDH18Q9HCL0 1135 aa16.92■□□□□ 0.3
TPM1-228ENST00000560975 TUBGCP4Q9UGJ1 667 aa16.92■□□□□ 0.3
TPM1-228ENST00000560975 DCDC2Q9UHG0 476 aa16.92■□□□□ 0.3
TPM1-228ENST00000560975 PCDHGC3Q9UN70 934 aa16.92■□□□□ 0.3
TPM1-228ENST00000560975 SH3PXD2BA1X283 911 aa16.91■□□□□ 0.3
TPM1-228ENST00000560975 STBD1O95210 358 aa16.91■□□□□ 0.3
TPM1-228ENST00000560975 ALOX15P16050 662 aaPredicted RBP16.91■□□□□ 0.3
TPM1-228ENST00000560975 PRDX6P30041 224 aa16.91■□□□□ 0.3
TPM1-228ENST00000560975 DPP6P42658 865 aa16.91■□□□□ 0.3
TPM1-228ENST00000560975 SESN2P58004 480 aaPredicted RBP16.91■□□□□ 0.3
TPM1-228ENST00000560975 ADRM1Q16186 407 aa16.91■□□□□ 0.3
TPM1-228ENST00000560975 ZFP1Q6P2D0 407 aa16.91■□□□□ 0.3
TPM1-228ENST00000560975 CES3Q6UWW8 571 aa16.91■□□□□ 0.3
TPM1-228ENST00000560975 MYO1HQ8N1T3 1032 aa16.91■□□□□ 0.3
TPM1-228ENST00000560975 FNIP1Q8TF40 1166 aa16.91■□□□□ 0.3
TPM1-228ENST00000560975 YIPF2Q9BWQ6 316 aa16.91■□□□□ 0.3
TPM1-228ENST00000560975 COQ10BQ9H8M1 238 aa16.91■□□□□ 0.3
TPM1-228ENST00000560975 PLGRKTQ9HBL7 147 aa16.91■□□□□ 0.3
TPM1-228ENST00000560975 PRPF19Q9UMS4 504 aaKnown RBP16.91■□□□□ 0.3
TPM1-228ENST00000560975 TMX2-CTNND1H3BSU7 103 aa16.91■□□□□ 0.3
TPM1-228ENST00000560975 STAMBPO95630 424 aa16.91■□□□□ 0.3
TPM1-228ENST00000560975 CAP2P40123 477 aa16.91■□□□□ 0.3
TPM1-228ENST00000560975 HARS2P49590 506 aaKnown RBP16.91■□□□□ 0.3
TPM1-228ENST00000560975 TGFB2P61812 414 aa16.91■□□□□ 0.3
TPM1-228ENST00000560975 DGKZQ13574 1117 aa16.91■□□□□ 0.3
TPM1-228ENST00000560975 PIGGQ5H8A4 983 aa16.91■□□□□ 0.3
TPM1-228ENST00000560975 FAM47CQ5HY64 1035 aa16.91■□□□□ 0.3
TPM1-228ENST00000560975 IL23RQ5VWK5 629 aa16.91■□□□□ 0.3
TPM1-228ENST00000560975 KRT80Q6KB66 452 aa16.91■□□□□ 0.3
TPM1-228ENST00000560975 CCDC60Q8IWA6 550 aaPredicted RBP16.91■□□□□ 0.3
TPM1-228ENST00000560975 PDCD6IPQ8WUM4 868 aaKnown RBP16.91■□□□□ 0.3
TPM1-228ENST00000560975 ATP6V0A1Q93050 837 aa16.91■□□□□ 0.3
TPM1-228ENST00000560975 ATP6V1E2Q96A05 226 aa16.91■□□□□ 0.3
TPM1-228ENST00000560975 PGLYRP2Q96PD5 576 aa16.91■□□□□ 0.3
TPM1-228ENST00000560975 FERMT1Q9BQL6 677 aa16.91■□□□□ 0.3
TPM1-228ENST00000560975 TMEM79Q9BSE2 394 aa16.91■□□□□ 0.3
TPM1-228ENST00000560975 GCOM2Q9BZD3 368 aaPredicted RBP16.91■□□□□ 0.3
TPM1-228ENST00000560975 NUF2Q9BZD4 464 aa16.91■□□□□ 0.3
TPM1-228ENST00000560975 OSBPL6Q9BZF3 934 aa16.91■□□□□ 0.3
TPM1-228ENST00000560975 PDLIM7Q9NR12 457 aa16.91■□□□□ 0.3
TPM1-228ENST00000560975 ASNSD1Q9NWL6 643 aa16.91■□□□□ 0.3
TPM1-228ENST00000560975 EBF1Q9UH73 591 aa16.91■□□□□ 0.3
TPM1-228ENST00000560975 SLX4Q8IY92 1834 aa16.91■□□□□ 0.3
TPM1-228ENST00000560975 APOL1O14791 398 aa16.91■□□□□ 0.3
TPM1-228ENST00000560975 PRPSAP2O60256 369 aa16.91■□□□□ 0.3
TPM1-228ENST00000560975 ATG7O95352 703 aa16.91■□□□□ 0.3
TPM1-228ENST00000560975 HSPA13P48723 471 aa16.91■□□□□ 0.3
TPM1-228ENST00000560975 EMC2Q15006 297 aa16.91■□□□□ 0.3
TPM1-228ENST00000560975 ZNF699Q32M78 642 aa16.91■□□□□ 0.3
TPM1-228ENST00000560975 MGAT5BQ3V5L5 792 aa16.91■□□□□ 0.3
TPM1-228ENST00000560975 ARHGEF16Q5VV41 709 aa16.91■□□□□ 0.3
TPM1-228ENST00000560975 TMEM198Q66K66 360 aa16.91■□□□□ 0.3
TPM1-228ENST00000560975 NCCRP1Q6ZVX7 275 aaPredicted RBP16.91■□□□□ 0.3
TPM1-228ENST00000560975 CLVS1Q8IUQ0 354 aaPredicted RBP16.91■□□□□ 0.3
TPM1-228ENST00000560975 TDRD5Q8NAT2 981 aaKnown RBP16.91■□□□□ 0.3
TPM1-228ENST00000560975 LRRC39Q96DD0 335 aa16.91■□□□□ 0.3
TPM1-228ENST00000560975 MOCS1Q9NZB8 636 aa16.91■□□□□ 0.3
TPM1-228ENST00000560975 STYXL1Q9Y6J8 313 aa16.91■□□□□ 0.3
TPM1-228ENST00000560975 LDHAP00338 332 aaKnown RBP16.9■□□□□ 0.3
TPM1-228ENST00000560975 MLH1P40692 756 aa16.9■□□□□ 0.3
TPM1-228ENST00000560975 ABCG1P45844 678 aa16.9■□□□□ 0.3
TPM1-228ENST00000560975 CCR10P46092 362 aa16.9■□□□□ 0.3
TPM1-228ENST00000560975 NXNQ6DKJ4 435 aa16.9■□□□□ 0.3
TPM1-228ENST00000560975 SLFN12LQ6IEE8 588 aa16.9■□□□□ 0.3
TPM1-228ENST00000560975 CHERPQ8IWX8 916 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms