RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 GUF1Q8N442 669 aaKnown RBP2.68□□□□□ -1.98
SPG11-223ENST00000560858 MREGQ8N565 214 aa2.68□□□□□ -1.98
SPG11-223ENST00000560858 CSGALNACT2Q8N6G5 542 aa2.68□□□□□ -1.98
SPG11-223ENST00000560858 EFHBQ8N7U6 833 aa2.68□□□□□ -1.98
SPG11-223ENST00000560858 EIF1ADQ8N9N8 165 aaKnown RBP2.68□□□□□ -1.98
SPG11-223ENST00000560858 KIAA0895Q8NCT3 520 aa2.68□□□□□ -1.98
SPG11-223ENST00000560858 C1orf131Q8NDD1 294 aaKnown RBP2.68□□□□□ -1.98
SPG11-223ENST00000560858 STAMQ92783 540 aa2.68□□□□□ -1.98
SPG11-223ENST00000560858 SECISBP2LQ93073 1101 aaKnown RBP2.68□□□□□ -1.98
SPG11-223ENST00000560858 CCDC47Q96A33 483 aaKnown RBP2.68□□□□□ -1.98
SPG11-223ENST00000560858 MARS2Q96GW9 593 aaKnown RBP2.68□□□□□ -1.98
SPG11-223ENST00000560858 FAM84BQ96KN1 310 aaPredicted RBP2.68□□□□□ -1.98
SPG11-223ENST00000560858 INPP4AQ96PE3 977 aaPredicted RBP2.68□□□□□ -1.98
SPG11-223ENST00000560858 LZTS2Q9BRK4 669 aa2.68□□□□□ -1.98
SPG11-223ENST00000560858 TMEM79Q9BSE2 394 aa2.68□□□□□ -1.98
SPG11-223ENST00000560858 MMTAG2Q9BU76 263 aaKnown RBP2.68□□□□□ -1.98
SPG11-223ENST00000560858 EDEM3Q9BZQ6 932 aa2.68□□□□□ -1.98
SPG11-223ENST00000560858 FAM107BQ9H098 131 aa2.68□□□□□ -1.98
SPG11-223ENST00000560858 ZMYND12Q9H0C1 365 aa2.68□□□□□ -1.98
SPG11-223ENST00000560858 NHEJ1Q9H9Q4 299 aaPredicted RBP2.68□□□□□ -1.98
SPG11-223ENST00000560858 AGPAT5Q9NUQ2 364 aa2.68□□□□□ -1.98
SPG11-223ENST00000560858 BARHL2Q9NY43 387 aa2.68□□□□□ -1.98
SPG11-223ENST00000560858 TUBA8Q9NY65 449 aaPredicted RBP2.68□□□□□ -1.98
SPG11-223ENST00000560858 MOCS1Q9NZB8 636 aa2.68□□□□□ -1.98
SPG11-223ENST00000560858 MAD2L2Q9UI95 211 aa2.68□□□□□ -1.98
SPG11-223ENST00000560858 TMPRSS11EQ9UL52 423 aa2.68□□□□□ -1.98
SPG11-223ENST00000560858 GUCA1BQ9UMX6 200 aa2.68□□□□□ -1.98
SPG11-223ENST00000560858 PCDHA6Q9UN73 950 aa2.68□□□□□ -1.98
SPG11-223ENST00000560858 ST3GAL5Q9UNP4 418 aa2.68□□□□□ -1.98
SPG11-223ENST00000560858 THRAP3Q9Y2W1 955 aaKnown RBP2.68□□□□□ -1.98
SPG11-223ENST00000560858 JRKLQ9Y4A0 524 aa2.68□□□□□ -1.98
SPG11-223ENST00000560858 HYOU1Q9Y4L1 999 aa2.68□□□□□ -1.98
SPG11-223ENST00000560858 LOC285556D6RIA3 1793 aa2.68□□□□□ -1.98
SPG11-223ENST00000560858 KAT6AQ92794 2004 aa2.68□□□□□ -1.98
SPG11-223ENST00000560858 MYO3BQ8WXR4 1341 aa2.68□□□□□ -1.98
SPG11-223ENST00000560858 ZNF335Q9H4Z2 1342 aaPredicted RBP2.68□□□□□ -1.98
SPG11-223ENST00000560858 SCN9AQ15858 1988 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 CCDC194A0A1B0GVG4 234 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 PVALEFA0A1B0GWK0 134 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 CCDC78A2IDD5 438 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 GOLGA6CA6NDK9 693 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 GOLGA6BA6NDN3 693 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 TSPY2A6NKD2 308 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 A6NNZ2 444 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 LINC00473A8K010 186 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 PP2D1A8MPX8 630 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 BTNL10A8MVZ5 291 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 GOLGA8KD6RF30 607 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 CES2O00748 559 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 EPHB6O15197 1021 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 EIF3HO15372 352 aaKnown RBP eCLIP2.67□□□□□ -1.98
SPG11-223ENST00000560858 PROM1O43490 865 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 USO1O60763 962 aaKnown RBP2.67□□□□□ -1.98
SPG11-223ENST00000560858 SRGAP2O75044 1071 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 TMEM127O75204 238 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 IPO7O95373 1038 aaKnown RBP2.67□□□□□ -1.98
SPG11-223ENST00000560858 LATS1O95835 1130 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 TOP3BO95985 862 aaKnown RBP2.67□□□□□ -1.98
SPG11-223ENST00000560858 ELFN1P0C7U0 828 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 GOLGA6DP0CG33 693 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 RAP2AP10114 183 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 IDEP14735 1019 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 ALOX15P16050 662 aaPredicted RBP2.67□□□□□ -1.98
SPG11-223ENST00000560858 ATP2A2P16615 1042 aaKnown RBP2.67□□□□□ -1.98
SPG11-223ENST00000560858 KLRK1P26718 216 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 MPGP29372 298 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 UBA7P41226 1012 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 TNNT3P45378 269 aaPredicted RBP2.67□□□□□ -1.98
SPG11-223ENST00000560858 MTIF2P46199 727 aaKnown RBP2.67□□□□□ -1.98
SPG11-223ENST00000560858 KLK7P49862 253 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 ZNF134P52741 427 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 EVA1CP58658 441 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 ASIC1P78348 528 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 KIF5AQ12840 1032 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 PPFIA1Q13136 1202 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 SEPT2Q15019 361 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 NONOQ15233 471 aaKnown RBP eCLIP2.67□□□□□ -1.98
SPG11-223ENST00000560858 TXNRD1Q16881 649 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 TUBB8Q3ZCM7 444 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 TTC31Q49AM3 519 aaPredicted RBP2.67□□□□□ -1.98
SPG11-223ENST00000560858 FNDC3BQ53EP0 1204 aaKnown RBP2.67□□□□□ -1.98
SPG11-223ENST00000560858 GLE1Q53GS7 698 aaKnown RBP2.67□□□□□ -1.98
SPG11-223ENST00000560858 CAVIN4Q5BKX8 364 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 GPR158Q5T848 1215 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 C12orf60Q5U649 245 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 ANKRD40Q6AI12 368 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 CCDC70Q6NSX1 233 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 FAM180AQ6UWF9 173 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 KDM7AQ6ZMT4 941 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 C16orf86Q6ZW13 317 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 UNC13DQ70J99 1090 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 TADA2BQ86TJ2 420 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 KRT73Q86Y46 540 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 SUGP1Q8IWZ8 645 aaKnown RBP2.67□□□□□ -1.98
SPG11-223ENST00000560858 C10orf67Q8IYJ2 551 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 RNF10Q8N5U6 811 aaKnown RBP2.67□□□□□ -1.98
SPG11-223ENST00000560858 SPATA4Q8NEY3 305 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 REPS2Q8NFH8 660 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 TOR1AIP2Q8NFQ8 470 aa2.67□□□□□ -1.98
SPG11-223ENST00000560858 FAM76AQ8TAV0 307 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms