RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 FERP16591 822 aa13.43□□□□□ -0.26
CTDSPL2-209ENST00000560620 POLR2EP19388 210 aaKnown RBP13.43□□□□□ -0.26
CTDSPL2-209ENST00000560620 BYSLQ13895 437 aaKnown RBP13.43□□□□□ -0.26
CTDSPL2-209ENST00000560620 ZNF234Q14588 700 aa13.43□□□□□ -0.26
CTDSPL2-209ENST00000560620 RABGAP1LQ5R372 815 aa13.43□□□□□ -0.26
CTDSPL2-209ENST00000560620 KIAA1211LQ6NV74 962 aa13.43□□□□□ -0.26
CTDSPL2-209ENST00000560620 KIAA1324Q6UXG2 1013 aaKnown RBP13.43□□□□□ -0.26
CTDSPL2-209ENST00000560620 WFIKKN2Q8TEU8 576 aa13.43□□□□□ -0.26
CTDSPL2-209ENST00000560620 CYB5D2Q8WUJ1 264 aa13.43□□□□□ -0.26
CTDSPL2-209ENST00000560620 GABRG3Q99928 467 aa13.43□□□□□ -0.26
CTDSPL2-209ENST00000560620 IRX2Q9BZI1 471 aaPredicted RBP13.43□□□□□ -0.26
CTDSPL2-209ENST00000560620 SIK2Q9H0K1 926 aa13.43□□□□□ -0.26
CTDSPL2-209ENST00000560620 WDCPQ9H6R7 721 aa13.43□□□□□ -0.26
CTDSPL2-209ENST00000560620 METTL5Q9NRN9 209 aaKnown RBP13.43□□□□□ -0.26
CTDSPL2-209ENST00000560620 PAXBP1Q9Y5B6 917 aa13.43□□□□□ -0.26
CTDSPL2-209ENST00000560620 EML5Q05BV3 1969 aa13.43□□□□□ -0.26
CTDSPL2-209ENST00000560620 PTPRZ1P23471 2315 aaPredicted RBP13.42□□□□□ -0.26
CTDSPL2-209ENST00000560620 A0A1W2PQF6 199 aa13.42□□□□□ -0.26
CTDSPL2-209ENST00000560620 MOCS3O95396 460 aa13.42□□□□□ -0.26
CTDSPL2-209ENST00000560620 CAVIN2O95810 425 aa13.42□□□□□ -0.26
CTDSPL2-209ENST00000560620 F9P00740 461 aa13.42□□□□□ -0.26
CTDSPL2-209ENST00000560620 CYP1A1P04798 512 aaPredicted RBP13.42□□□□□ -0.26
CTDSPL2-209ENST00000560620 CHRM1P11229 460 aaPredicted RBP13.42□□□□□ -0.26
CTDSPL2-209ENST00000560620 CHRNB2P17787 502 aa13.42□□□□□ -0.26
CTDSPL2-209ENST00000560620 GABRG2P18507 467 aa13.42□□□□□ -0.26
CTDSPL2-209ENST00000560620 CD70P32970 193 aa13.42□□□□□ -0.26
CTDSPL2-209ENST00000560620 SCNN1AP37088 669 aa13.42□□□□□ -0.26
CTDSPL2-209ENST00000560620 IL12RB1P42701 662 aa13.42□□□□□ -0.26
CTDSPL2-209ENST00000560620 SLC25A52Q3SY17 297 aa13.42□□□□□ -0.26
CTDSPL2-209ENST00000560620 PLK5Q496M5 336 aa13.42□□□□□ -0.26
CTDSPL2-209ENST00000560620 TMEM215Q68D42 235 aa13.42□□□□□ -0.26
CTDSPL2-209ENST00000560620 MBLAC2Q68D91 279 aa13.42□□□□□ -0.26
CTDSPL2-209ENST00000560620 C11orf74Q86VG3 221 aa13.42□□□□□ -0.26
CTDSPL2-209ENST00000560620 GPR161Q8N6U8 529 aaKnown RBP13.42□□□□□ -0.26
CTDSPL2-209ENST00000560620 WFDC5Q8TCV5 224 aa13.42□□□□□ -0.26
CTDSPL2-209ENST00000560620 MYEOVQ96EZ4 313 aa13.42□□□□□ -0.26
CTDSPL2-209ENST00000560620 CFAP57Q96MR6 1250 aa13.42□□□□□ -0.26
CTDSPL2-209ENST00000560620 NAP1L5Q96NT1 182 aaPredicted RBP13.42□□□□□ -0.26
CTDSPL2-209ENST00000560620 RPRD1AQ96P16 312 aaPredicted RBP13.42□□□□□ -0.26
CTDSPL2-209ENST00000560620 TBCBQ99426 244 aa13.42□□□□□ -0.26
CTDSPL2-209ENST00000560620 AGPAT1Q99943 283 aa13.42□□□□□ -0.26
CTDSPL2-209ENST00000560620 TKTL2Q9H0I9 626 aa13.42□□□□□ -0.26
CTDSPL2-209ENST00000560620 ARRDC1-AS1Q9H2J1 176 aa13.42□□□□□ -0.26
CTDSPL2-209ENST00000560620 PIGVQ9NUD9 493 aa13.42□□□□□ -0.26
CTDSPL2-209ENST00000560620 ADAM22Q9P0K1 906 aa13.42□□□□□ -0.26
CTDSPL2-209ENST00000560620 CALCOCO1Q9P1Z2 691 aa13.42□□□□□ -0.26
CTDSPL2-209ENST00000560620 THAP10Q9P2Z0 257 aaPredicted RBP13.42□□□□□ -0.26
CTDSPL2-209ENST00000560620 RIF1Q5UIP0 2472 aaKnown RBP13.42□□□□□ -0.26
CTDSPL2-209ENST00000560620 FAM186AA6NE01 2351 aa13.42□□□□□ -0.26
CTDSPL2-209ENST00000560620 A0A1B0GTH6 734 aa13.41□□□□□ -0.26
CTDSPL2-209ENST00000560620 LRRC53A6NM62 1247 aa13.41□□□□□ -0.26
CTDSPL2-209ENST00000560620 LUC7L3O95232 432 aaKnown RBP13.41□□□□□ -0.26
CTDSPL2-209ENST00000560620 NDUFV2P19404 249 aa13.41□□□□□ -0.26
CTDSPL2-209ENST00000560620 TFE3P19532 575 aaPredicted RBP13.41□□□□□ -0.26
CTDSPL2-209ENST00000560620 TNFAIP3P21580 790 aa13.41□□□□□ -0.26
CTDSPL2-209ENST00000560620 MMP8P22894 467 aa13.41□□□□□ -0.26
CTDSPL2-209ENST00000560620 FLT3P36888 993 aa13.41□□□□□ -0.26
CTDSPL2-209ENST00000560620 GGCXP38435 758 aa13.41□□□□□ -0.26
CTDSPL2-209ENST00000560620 DHPSP49366 369 aaPredicted RBP13.41□□□□□ -0.26
CTDSPL2-209ENST00000560620 NUMBP49757 651 aa13.41□□□□□ -0.26
CTDSPL2-209ENST00000560620 UBASH3AP57075 661 aa13.41□□□□□ -0.26
CTDSPL2-209ENST00000560620 ST8SIA6P61647 398 aa13.41□□□□□ -0.26
CTDSPL2-209ENST00000560620 ATP11AP98196 1134 aa13.41□□□□□ -0.26
CTDSPL2-209ENST00000560620 FANCCQ00597 558 aa13.41□□□□□ -0.26
CTDSPL2-209ENST00000560620 CREB5Q02930 508 aa13.41□□□□□ -0.26
CTDSPL2-209ENST00000560620 MTA1Q13330 715 aa13.41□□□□□ -0.26
CTDSPL2-209ENST00000560620 CCDC6Q16204 474 aa13.41□□□□□ -0.26
CTDSPL2-209ENST00000560620 ASIC2Q16515 512 aa13.41□□□□□ -0.26
CTDSPL2-209ENST00000560620 CDO1Q16878 200 aa13.41□□□□□ -0.26
CTDSPL2-209ENST00000560620 CLEC16AQ2KHT3 1053 aa13.41□□□□□ -0.26
CTDSPL2-209ENST00000560620 CIR1Q86X95 450 aaPredicted RBP13.41□□□□□ -0.26
CTDSPL2-209ENST00000560620 CACUL1Q86Y37 369 aa13.41□□□□□ -0.26
CTDSPL2-209ENST00000560620 EMC1Q8N766 993 aa13.41□□□□□ -0.26
CTDSPL2-209ENST00000560620 ZNF366Q8N895 744 aa13.41□□□□□ -0.26
CTDSPL2-209ENST00000560620 FIBINQ8TAL6 211 aa13.41□□□□□ -0.26
CTDSPL2-209ENST00000560620 ZC3H10Q96K80 434 aaKnown RBP13.41□□□□□ -0.26
CTDSPL2-209ENST00000560620 NPY6RQ99463 290 aa13.41□□□□□ -0.26
CTDSPL2-209ENST00000560620 SELENOOQ9BVL4 669 aa13.41□□□□□ -0.26
CTDSPL2-209ENST00000560620 DUSP15Q9H1R2 295 aaPredicted RBP13.41□□□□□ -0.26
CTDSPL2-209ENST00000560620 SLC6A17Q9H1V8 727 aa13.41□□□□□ -0.26
CTDSPL2-209ENST00000560620 VANGL2Q9ULK5 521 aa13.41□□□□□ -0.26
CTDSPL2-209ENST00000560620 CFAP54Q96N23 3096 aa13.41□□□□□ -0.26
CTDSPL2-209ENST00000560620 WDR87Q6ZQQ6 2873 aa13.41□□□□□ -0.26
CTDSPL2-209ENST00000560620 RALGAPA1Q6GYQ0 2036 aa13.4□□□□□ -0.26
CTDSPL2-209ENST00000560620 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.4□□□□□ -0.26
CTDSPL2-209ENST00000560620 A0A1W2PQC6 194 aa13.4□□□□□ -0.26
CTDSPL2-209ENST00000560620 ANKRD62A6NC57 917 aa13.4□□□□□ -0.26
CTDSPL2-209ENST00000560620 PAGE1O75459 146 aa13.4□□□□□ -0.26
CTDSPL2-209ENST00000560620 CALB1P05937 261 aa13.4□□□□□ -0.26
CTDSPL2-209ENST00000560620 DLDP09622 509 aaKnown RBP13.4□□□□□ -0.26
CTDSPL2-209ENST00000560620 ACADMP11310 421 aa13.4□□□□□ -0.26
CTDSPL2-209ENST00000560620 UNGP13051 313 aaPredicted RBP13.4□□□□□ -0.26
CTDSPL2-209ENST00000560620 HLA-EP13747 358 aa13.4□□□□□ -0.26
CTDSPL2-209ENST00000560620 PDGFRAP16234 1089 aa13.4□□□□□ -0.26
CTDSPL2-209ENST00000560620 BCKDHBP21953 392 aa13.4□□□□□ -0.26
CTDSPL2-209ENST00000560620 PRKCHP24723 683 aa13.4□□□□□ -0.26
CTDSPL2-209ENST00000560620 SDC4P31431 198 aa13.4□□□□□ -0.26
CTDSPL2-209ENST00000560620 P2RY2P41231 377 aa13.4□□□□□ -0.26
CTDSPL2-209ENST00000560620 CENPCQ03188 943 aa13.4□□□□□ -0.26
CTDSPL2-209ENST00000560620 LMAN2Q12907 356 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms