RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 SGK2Q9HBY8 427 aa6.83□□□□□ -1.32
HERC1-208ENST00000560462 EPB41L5Q9HCM4 733 aa6.83□□□□□ -1.32
HERC1-208ENST00000560462 XPNPEP1Q9NQW7 623 aa6.83□□□□□ -1.32
HERC1-208ENST00000560462 SMPD4Q9NXE4 827 aa6.83□□□□□ -1.32
HERC1-208ENST00000560462 PISDQ9UG56 409 aa6.83□□□□□ -1.32
HERC1-208ENST00000560462 R3HCC1Q9Y3T6 440 aaKnown RBP6.83□□□□□ -1.32
HERC1-208ENST00000560462 CPQQ9Y646 472 aa6.83□□□□□ -1.32
HERC1-208ENST00000560462 ZNF469Q96JG9 3925 aaPredicted RBP6.83□□□□□ -1.32
HERC1-208ENST00000560462 COL27A1Q8IZC6 1860 aaPredicted RBP6.82□□□□□ -1.32
HERC1-208ENST00000560462 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.82□□□□□ -1.32
HERC1-208ENST00000560462 LY6G6EA0A0G2JKS1 128 aa6.82□□□□□ -1.32
HERC1-208ENST00000560462 SMCO2A6NFE2 343 aa6.82□□□□□ -1.32
HERC1-208ENST00000560462 FAM47DPA6NHR8 397 aa6.82□□□□□ -1.32
HERC1-208ENST00000560462 LRRIQ4A6NIV6 560 aa6.82□□□□□ -1.32
HERC1-208ENST00000560462 SH2B2O14492 632 aaPredicted RBP6.82□□□□□ -1.32
HERC1-208ENST00000560462 WNT9AO14904 365 aa6.82□□□□□ -1.32
HERC1-208ENST00000560462 NPC1O15118 1278 aa6.82□□□□□ -1.32
HERC1-208ENST00000560462 PSMD10O75832 226 aa6.82□□□□□ -1.32
HERC1-208ENST00000560462 NOL4O94818 638 aa6.82□□□□□ -1.32
HERC1-208ENST00000560462 KCNE1P15382 129 aa6.82□□□□□ -1.32
HERC1-208ENST00000560462 PFKLP17858 780 aa6.82□□□□□ -1.32
HERC1-208ENST00000560462 TYMPP19971 482 aa6.82□□□□□ -1.32
HERC1-208ENST00000560462 KLK2P20151 261 aa6.82□□□□□ -1.32
HERC1-208ENST00000560462 GLRA2P23416 452 aa6.82□□□□□ -1.32
HERC1-208ENST00000560462 CIITAP33076 1130 aa6.82□□□□□ -1.32
HERC1-208ENST00000560462 GPR15P49685 360 aa6.82□□□□□ -1.32
HERC1-208ENST00000560462 ANAPC15P60006 121 aa6.82□□□□□ -1.32
HERC1-208ENST00000560462 PPP2R2AP63151 447 aa6.82□□□□□ -1.32
HERC1-208ENST00000560462 SLC7A9P82251 487 aa6.82□□□□□ -1.32
HERC1-208ENST00000560462 SSRP1Q08945 709 aaKnown RBP6.82□□□□□ -1.32
HERC1-208ENST00000560462 ZNF177Q13360 481 aaPredicted RBP6.82□□□□□ -1.32
HERC1-208ENST00000560462 CAMK2GQ13555 558 aaPredicted RBP6.82□□□□□ -1.32
HERC1-208ENST00000560462 LBRQ14739 615 aaKnown RBP6.82□□□□□ -1.32
HERC1-208ENST00000560462 ZRSR2Q15696 482 aaKnown RBP6.82□□□□□ -1.32
HERC1-208ENST00000560462 INPP5JQ15735 1006 aaPredicted RBP6.82□□□□□ -1.32
HERC1-208ENST00000560462 IMMTQ16891 758 aaKnown RBP6.82□□□□□ -1.32
HERC1-208ENST00000560462 XKR9Q5GH70 373 aa6.82□□□□□ -1.32
HERC1-208ENST00000560462 SDHAF4Q5VUM1 108 aa6.82□□□□□ -1.32
HERC1-208ENST00000560462 CEP135Q66GS9 1140 aa6.82□□□□□ -1.32
HERC1-208ENST00000560462 DSTYKQ6XUX3 929 aa6.82□□□□□ -1.32
HERC1-208ENST00000560462 OTUD6AQ7L8S5 288 aa6.82□□□□□ -1.32
HERC1-208ENST00000560462 APBB1IPQ7Z5R6 666 aaPredicted RBP6.82□□□□□ -1.32
HERC1-208ENST00000560462 SPATS2Q86XZ4 545 aaKnown RBP6.82□□□□□ -1.32
HERC1-208ENST00000560462 TGIF2LYQ8IUE0 185 aa6.82□□□□□ -1.32
HERC1-208ENST00000560462 CCDC13Q8IYE1 715 aa6.82□□□□□ -1.32
HERC1-208ENST00000560462 JPH3Q8WXH2 748 aaPredicted RBP6.82□□□□□ -1.32
HERC1-208ENST00000560462 SRRTQ9BXP5 876 aaKnown RBP6.82□□□□□ -1.32
HERC1-208ENST00000560462 TRIM8Q9BZR9 551 aa6.82□□□□□ -1.32
HERC1-208ENST00000560462 ZCWPW1Q9H0M4 648 aa6.82□□□□□ -1.32
HERC1-208ENST00000560462 PREBQ9HCU5 417 aa6.82□□□□□ -1.32
HERC1-208ENST00000560462 GJB4Q9NTQ9 266 aa6.82□□□□□ -1.32
HERC1-208ENST00000560462 UCKL1Q9NWZ5 548 aa6.82□□□□□ -1.32
HERC1-208ENST00000560462 KCND3Q9UK17 655 aa6.82□□□□□ -1.32
HERC1-208ENST00000560462 U3KQA8 63 aa6.82□□□□□ -1.32
HERC1-208ENST00000560462 SHANK1Q9Y566 2161 aa6.82□□□□□ -1.32
HERC1-208ENST00000560462 CPED1A4D0V7 1026 aa6.81□□□□□ -1.32
HERC1-208ENST00000560462 DDAH1O94760 285 aa6.81□□□□□ -1.32
HERC1-208ENST00000560462 PF4P02776 101 aa6.81□□□□□ -1.32
HERC1-208ENST00000560462 SNRPB2P08579 225 aaKnown RBP6.81□□□□□ -1.32
HERC1-208ENST00000560462 PRKAR1AP10644 381 aa6.81□□□□□ -1.32
HERC1-208ENST00000560462 COX6B1P14854 86 aa6.81□□□□□ -1.32
HERC1-208ENST00000560462 LIFP15018 202 aa6.81□□□□□ -1.32
HERC1-208ENST00000560462 BPIP17213 487 aa6.81□□□□□ -1.32
HERC1-208ENST00000560462 CD82P27701 267 aa6.81□□□□□ -1.32
HERC1-208ENST00000560462 SSTR2P30874 369 aa6.81□□□□□ -1.32
HERC1-208ENST00000560462 YWHABP31946 246 aaKnown RBP6.81□□□□□ -1.32
HERC1-208ENST00000560462 ARL2P36404 184 aa6.81□□□□□ -1.32
HERC1-208ENST00000560462 AARSP49588 968 aaKnown RBP eCLIP6.81□□□□□ -1.32
HERC1-208ENST00000560462 CDH8P55286 799 aa6.81□□□□□ -1.32
HERC1-208ENST00000560462 PER3P56645 1201 aa6.81□□□□□ -1.32
HERC1-208ENST00000560462 KRTAP10-9P60411 292 aa6.81□□□□□ -1.32
HERC1-208ENST00000560462 ENPP2Q13822 863 aa6.81□□□□□ -1.32
HERC1-208ENST00000560462 SPIDRQ14159 915 aa6.81□□□□□ -1.32
HERC1-208ENST00000560462 FGL2Q14314 439 aa6.81□□□□□ -1.32
HERC1-208ENST00000560462 CDKN3Q16667 212 aa6.81□□□□□ -1.32
HERC1-208ENST00000560462 KIF26BQ2KJY2 2108 aa6.81□□□□□ -1.32
HERC1-208ENST00000560462 DEFB109BQ30KR1 87 aa6.81□□□□□ -1.32
HERC1-208ENST00000560462 RPS26P11Q5JNZ5 115 aaPredicted RBP6.81□□□□□ -1.32
HERC1-208ENST00000560462 SNAP47Q5SQN1 464 aa6.81□□□□□ -1.32
HERC1-208ENST00000560462 NUGGCQ68CJ6 796 aa6.81□□□□□ -1.32
HERC1-208ENST00000560462 PPP4R3AQ6IN85 833 aa6.81□□□□□ -1.32
HERC1-208ENST00000560462 CRTC1Q6UUV9 634 aa6.81□□□□□ -1.32
HERC1-208ENST00000560462 B3GNT9Q6UX72 402 aa6.81□□□□□ -1.32
HERC1-208ENST00000560462 EFL1Q7Z2Z2 1120 aaKnown RBP6.81□□□□□ -1.32
HERC1-208ENST00000560462 DDX42Q86XP3 938 aaKnown RBP eCLIP6.81□□□□□ -1.32
HERC1-208ENST00000560462 TMEM25Q86YD3 366 aa6.81□□□□□ -1.32
HERC1-208ENST00000560462 ZBTB8OSQ8IWT0 167 aa6.81□□□□□ -1.32
HERC1-208ENST00000560462 GOLM1Q8NBJ4 401 aa6.81□□□□□ -1.32
HERC1-208ENST00000560462 WDR48Q8TAF3 677 aa6.81□□□□□ -1.32
HERC1-208ENST00000560462 NKD1Q969G9 470 aa6.81□□□□□ -1.32
HERC1-208ENST00000560462 CENPTQ96BT3 561 aa6.81□□□□□ -1.32
HERC1-208ENST00000560462 HVCN1Q96D96 273 aa6.81□□□□□ -1.32
HERC1-208ENST00000560462 SERAC1Q96JX3 654 aa6.81□□□□□ -1.32
HERC1-208ENST00000560462 XPO6Q96QU8 1125 aaKnown RBP6.81□□□□□ -1.32
HERC1-208ENST00000560462 CCDC94Q9BW85 323 aaPredicted RBP6.81□□□□□ -1.32
HERC1-208ENST00000560462 GSX2Q9BZM3 304 aa6.81□□□□□ -1.32
HERC1-208ENST00000560462 STRADBQ9C0K7 418 aa6.81□□□□□ -1.32
HERC1-208ENST00000560462 EBF2Q9HAK2 575 aa6.81□□□□□ -1.32
HERC1-208ENST00000560462 SPHK2Q9NRA0 654 aa6.81□□□□□ -1.32
HERC1-208ENST00000560462 RRN3Q9NYV6 651 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms