RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 PROX2Q3B8N5 592 aa13.37□□□□□ -0.27
RABGGTA-213ENST00000560127 MPPE1Q53F39 396 aa13.37□□□□□ -0.27
RABGGTA-213ENST00000560127 MBLAC2Q68D91 279 aa13.37□□□□□ -0.27
RABGGTA-213ENST00000560127 DHX40Q8IX18 779 aaKnown RBP13.37□□□□□ -0.27
RABGGTA-213ENST00000560127 GANCQ8TET4 914 aa13.37□□□□□ -0.27
RABGGTA-213ENST00000560127 PARD3BQ8TEW8 1205 aa13.37□□□□□ -0.27
RABGGTA-213ENST00000560127 SNRNP27Q8WVK2 155 aaKnown RBP13.37□□□□□ -0.27
RABGGTA-213ENST00000560127 CYFIP2Q96F07 1278 aa13.37□□□□□ -0.27
RABGGTA-213ENST00000560127 MED8Q96G25 268 aa13.37□□□□□ -0.27
RABGGTA-213ENST00000560127 ERVMER34-1Q9H9K5 563 aa13.37□□□□□ -0.27
RABGGTA-213ENST00000560127 ABCB8Q9NUT2 735 aa13.37□□□□□ -0.27
RABGGTA-213ENST00000560127 SUN2Q9UH99 717 aa13.37□□□□□ -0.27
RABGGTA-213ENST00000560127 GGA2Q9UJY4 613 aa13.37□□□□□ -0.27
RABGGTA-213ENST00000560127 SCML1Q9UN30 329 aa13.37□□□□□ -0.27
RABGGTA-213ENST00000560127 USP9YO00507 2555 aaPredicted RBP13.36□□□□□ -0.27
RABGGTA-213ENST00000560127 SPTBN1Q01082 2364 aaKnown RBP13.36□□□□□ -0.27
RABGGTA-213ENST00000560127 MYO9AB2RTY4 2548 aa13.36□□□□□ -0.27
RABGGTA-213ENST00000560127 A0A1W2PP55 124 aa13.36□□□□□ -0.27
RABGGTA-213ENST00000560127 TLR4O00206 839 aa13.36□□□□□ -0.27
RABGGTA-213ENST00000560127 MID1O15344 667 aa13.36□□□□□ -0.27
RABGGTA-213ENST00000560127 STX6O43752 255 aa13.36□□□□□ -0.27
RABGGTA-213ENST00000560127 MPOP05164 745 aa13.36□□□□□ -0.27
RABGGTA-213ENST00000560127 PABPC1P11940 636 aaKnown RBP13.36□□□□□ -0.27
RABGGTA-213ENST00000560127 P4HA1P13674 534 aa13.36□□□□□ -0.27
RABGGTA-213ENST00000560127 AP3M2P53677 418 aa13.36□□□□□ -0.27
RABGGTA-213ENST00000560127 SNRPFP62306 86 aaKnown RBP13.36□□□□□ -0.27
RABGGTA-213ENST00000560127 TRIP4Q15650 581 aaPredicted RBP13.36□□□□□ -0.27
RABGGTA-213ENST00000560127 SPOPLQ6IQ16 392 aa13.36□□□□□ -0.27
RABGGTA-213ENST00000560127 SPATS2Q86XZ4 545 aaKnown RBP13.36□□□□□ -0.27
RABGGTA-213ENST00000560127 C12orf56Q8IXR9 622 aa13.36□□□□□ -0.27
RABGGTA-213ENST00000560127 AHI1Q8N157 1196 aa13.36□□□□□ -0.27
RABGGTA-213ENST00000560127 PDILTQ8N807 584 aa13.36□□□□□ -0.27
RABGGTA-213ENST00000560127 OR2T34Q8NGX1 318 aa13.36□□□□□ -0.27
RABGGTA-213ENST00000560127 WFDC5Q8TCV5 224 aa13.36□□□□□ -0.27
RABGGTA-213ENST00000560127 SNX21Q969T3 373 aa13.36□□□□□ -0.27
RABGGTA-213ENST00000560127 MYO19Q96H55 970 aa13.36□□□□□ -0.27
RABGGTA-213ENST00000560127 NEUROG2Q9H2A3 272 aa13.36□□□□□ -0.27
RABGGTA-213ENST00000560127 STRIP2Q9ULQ0 834 aa13.36□□□□□ -0.27
RABGGTA-213ENST00000560127 UBE4BO95155 1302 aa13.36□□□□□ -0.27
RABGGTA-213ENST00000560127 UTP20O75691 2785 aaKnown RBP13.35□□□□□ -0.27
RABGGTA-213ENST00000560127 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.35□□□□□ -0.27
RABGGTA-213ENST00000560127 LRRC72A6NJI9 287 aa13.35□□□□□ -0.27
RABGGTA-213ENST00000560127 K7ELQ4 463 aaPredicted RBP13.35□□□□□ -0.27
RABGGTA-213ENST00000560127 TRIM38O00635 465 aa13.35□□□□□ -0.27
RABGGTA-213ENST00000560127 KLK10O43240 276 aa13.35□□□□□ -0.27
RABGGTA-213ENST00000560127 EXOC3O60645 756 aa13.35□□□□□ -0.27
RABGGTA-213ENST00000560127 DXOO77932 396 aaKnown RBP13.35□□□□□ -0.27
RABGGTA-213ENST00000560127 KIF20AO95235 890 aa13.35□□□□□ -0.27
RABGGTA-213ENST00000560127 ATP5BP06576 529 aaKnown RBP13.35□□□□□ -0.27
RABGGTA-213ENST00000560127 CSRP3P50461 194 aa13.35□□□□□ -0.27
RABGGTA-213ENST00000560127 CCR5P51681 352 aa13.35□□□□□ -0.27
RABGGTA-213ENST00000560127 SGSHP51688 502 aa13.35□□□□□ -0.27
RABGGTA-213ENST00000560127 E2F1Q01094 437 aa13.35□□□□□ -0.27
RABGGTA-213ENST00000560127 EHHADHQ08426 723 aa13.35□□□□□ -0.27
RABGGTA-213ENST00000560127 VAC14Q08AM6 782 aa13.35□□□□□ -0.27
RABGGTA-213ENST00000560127 INCA1Q0VD86 236 aa13.35□□□□□ -0.27
RABGGTA-213ENST00000560127 SGSM1Q2NKQ1 1148 aa13.35□□□□□ -0.27
RABGGTA-213ENST00000560127 ZACNQ401N2 412 aa13.35□□□□□ -0.27
RABGGTA-213ENST00000560127 FAM26FQ5R3K3 315 aa13.35□□□□□ -0.27
RABGGTA-213ENST00000560127 RSRC2Q7L4I2 434 aaKnown RBP13.35□□□□□ -0.27
RABGGTA-213ENST00000560127 OXR1Q8N573 874 aa13.35□□□□□ -0.27
RABGGTA-213ENST00000560127 KCNE4Q8WWG9 221 aa13.35□□□□□ -0.27
RABGGTA-213ENST00000560127 PLD4Q96BZ4 506 aa13.35□□□□□ -0.27
RABGGTA-213ENST00000560127 SERAC1Q96JX3 654 aa13.35□□□□□ -0.27
RABGGTA-213ENST00000560127 DUSP16Q9BY84 665 aa13.35□□□□□ -0.27
RABGGTA-213ENST00000560127 TNMDQ9H2S6 317 aa13.35□□□□□ -0.27
RABGGTA-213ENST00000560127 KBTBD4Q9NVX7 518 aa13.35□□□□□ -0.27
RABGGTA-213ENST00000560127 SMC3Q9UQE7 1217 aa13.35□□□□□ -0.27
RABGGTA-213ENST00000560127 SSUH2Q9Y2M2 353 aa13.35□□□□□ -0.27
RABGGTA-213ENST00000560127 RELNP78509 3460 aa13.34□□□□□ -0.27
RABGGTA-213ENST00000560127 SIGLEC6O43699 453 aa13.34□□□□□ -0.27
RABGGTA-213ENST00000560127 SIN3BO75182 1162 aa13.34□□□□□ -0.27
RABGGTA-213ENST00000560127 RNASEH2AO75792 299 aaKnown RBP13.34□□□□□ -0.27
RABGGTA-213ENST00000560127 ASS1P00966 412 aaKnown RBP13.34□□□□□ -0.27
RABGGTA-213ENST00000560127 RPN1P04843 607 aaKnown RBP13.34□□□□□ -0.27
RABGGTA-213ENST00000560127 CD70P32970 193 aa13.34□□□□□ -0.27
RABGGTA-213ENST00000560127 ERVPABLB-1P60509 514 aa13.34□□□□□ -0.27
RABGGTA-213ENST00000560127 GABREP78334 506 aa13.34□□□□□ -0.27
RABGGTA-213ENST00000560127 ASIC1P78348 528 aa13.34□□□□□ -0.27
RABGGTA-213ENST00000560127 DLG4P78352 724 aa13.34□□□□□ -0.27
RABGGTA-213ENST00000560127 CST6Q15828 149 aa13.34□□□□□ -0.27
RABGGTA-213ENST00000560127 PPP1R26Q5T8A7 1209 aaPredicted RBP13.34□□□□□ -0.27
RABGGTA-213ENST00000560127 CDCP2Q5VXM1 449 aa13.34□□□□□ -0.27
RABGGTA-213ENST00000560127 TMA16Q96EY4 203 aaKnown RBP13.34□□□□□ -0.27
RABGGTA-213ENST00000560127 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.34□□□□□ -0.27
RABGGTA-213ENST00000560127 NT5C1AQ9BXI3 368 aa13.34□□□□□ -0.27
RABGGTA-213ENST00000560127 ASCL3Q9NQ33 180 aa13.34□□□□□ -0.27
RABGGTA-213ENST00000560127 STOML2Q9UJZ1 356 aa13.34□□□□□ -0.27
RABGGTA-213ENST00000560127 TRPM6Q9BX84 2022 aa13.34□□□□□ -0.27
RABGGTA-213ENST00000560127 SDC3O75056 442 aa13.33□□□□□ -0.28
RABGGTA-213ENST00000560127 POLR2EP19388 210 aaKnown RBP13.33□□□□□ -0.28
RABGGTA-213ENST00000560127 LSSP48449 732 aa13.33□□□□□ -0.28
RABGGTA-213ENST00000560127 ADPRHP54922 357 aa13.33□□□□□ -0.28
RABGGTA-213ENST00000560127 ZNF445P59923 1031 aa13.33□□□□□ -0.28
RABGGTA-213ENST00000560127 YWHAGP61981 247 aaKnown RBP eCLIP13.33□□□□□ -0.28
RABGGTA-213ENST00000560127 CEBPZQ03701 1054 aaKnown RBP13.33□□□□□ -0.28
RABGGTA-213ENST00000560127 ZNF211Q13398 564 aaPredicted RBP13.33□□□□□ -0.28
RABGGTA-213ENST00000560127 E2F4Q16254 413 aa13.33□□□□□ -0.28
RABGGTA-213ENST00000560127 HNRNPA1L2Q32P51 320 aaKnown RBP13.33□□□□□ -0.28
RABGGTA-213ENST00000560127 C9orf64Q5T6V5 341 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms