RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 DUSP6Q16828 381 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 SLC5A9Q2M3M2 681 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 LRIT3Q3SXY7 679 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 ARHGAP29Q52LW3 1261 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 ZNF569Q5MCW4 686 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 LIN9Q5TKA1 542 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 PLEKHA7Q6IQ23 1121 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 AADACL2Q6P093 401 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 LILRA6Q6PI73 481 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 VSTM1Q6UX27 236 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 TMEM150AQ86TG1 271 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 TAC4Q86UU9 113 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 TMC8Q8IU68 726 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 DEFB106AQ8N104 65 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 GJD3Q8N144 294 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 ARFGAP1Q8N6T3 406 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 LRRC57Q8N9N7 239 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 C3orf20Q8ND61 904 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 ZNF461Q8TAF7 563 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 RXFP2Q8WXD0 754 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 ING5Q8WYH8 240 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 KCTD13Q8WZ19 329 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 KRT35Q92764 455 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 NXPE3Q969Y0 559 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 FUBP3Q96I24 572 aaKnown RBP eCLIP5.45□□□□□ -1.54
SPG11-220ENST00000559933 HSFY1Q96LI6 401 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 C8orf48Q96LL4 319 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 SAMD11Q96NU1 681 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 UBL7Q96S82 380 aaPredicted RBP5.45□□□□□ -1.54
SPG11-220ENST00000559933 PEBP4Q96S96 227 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 TBCBQ99426 244 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 CORO1BQ9BR76 489 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 CCSER2Q9H7U1 834 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 ABCB6Q9NP58 842 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 ANLNQ9NQW6 1124 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.45□□□□□ -1.54
SPG11-220ENST00000559933 GPATCH2LQ9NWQ4 482 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 EHD2Q9NZN4 543 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 TMEM59LQ9UK28 342 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 SOX13Q9UN79 622 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 SNX10Q9Y5X0 201 aa5.45□□□□□ -1.54
SPG11-220ENST00000559933 PRRC2BQ5JSZ5 2229 aaKnown RBP5.45□□□□□ -1.54
SPG11-220ENST00000559933 PRUNE2Q8WUY3 3088 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 TMEM191CA6NGB0 347 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 C2CD4BA6NLJ0 364 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 I6L893 689 aaPredicted RBP5.44□□□□□ -1.54
SPG11-220ENST00000559933 ZSCAN12O43309 604 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 KRT86O43790 486 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 HYAL3O43820 417 aaPredicted RBP5.44□□□□□ -1.54
SPG11-220ENST00000559933 SRGAP2O75044 1071 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 IGLV1-40P01703 118 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 LRG1P02750 347 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 LTFP02788 710 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 HMBSP08397 361 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 MYBL1P10243 752 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 KRT3P12035 628 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 MYL4P12829 197 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 NCAM1P13591 858 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 GPD1P21695 349 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 COMTP21964 271 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 SP100P23497 879 aaPredicted RBP5.44□□□□□ -1.54
SPG11-220ENST00000559933 MSNP26038 577 aaKnown RBP5.44□□□□□ -1.54
SPG11-220ENST00000559933 YWHAQP27348 245 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 IL1R2P27930 398 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 ELF1P32519 619 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 SSR1P43307 286 aaKnown RBP5.44□□□□□ -1.54
SPG11-220ENST00000559933 ACADSBP45954 432 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 ALDH1A3P47895 512 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 SULT1E1P49888 294 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 GSCP56915 257 aaPredicted RBP5.44□□□□□ -1.54
SPG11-220ENST00000559933 SLC8A3P57103 927 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 TAS2R40P59535 323 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 GNG11P61952 73 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 YWHAGP61981 247 aaKnown RBP eCLIP5.44□□□□□ -1.54
SPG11-220ENST00000559933 CREMQ03060 361 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 DLX2Q07687 328 aaPredicted RBP5.44□□□□□ -1.54
SPG11-220ENST00000559933 NME3Q13232 169 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 MYO9BQ13459 2157 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 ZNF268Q14587 947 aaPredicted RBP5.44□□□□□ -1.54
SPG11-220ENST00000559933 CCDC85BQ15834 202 aaPredicted RBP5.44□□□□□ -1.54
SPG11-220ENST00000559933 SMTNL2Q2TAL5 461 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 CCDC14Q49A88 953 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 ATP13A4Q4VNC1 1196 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 DCAF6Q58WW2 860 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 PPM1LQ5SGD2 360 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 RARS2Q5T160 578 aaKnown RBP5.44□□□□□ -1.54
SPG11-220ENST00000559933 BSPRYQ5W0U4 402 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 TPGS2Q68CL5 300 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 DCUN1D2Q6PH85 259 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 TMC5Q6UXY8 1006 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 ADAMTSL4Q6UY14 1074 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 SYT10Q6XYQ8 523 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 EP400NLQ6ZTU2 488 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 DENND5BQ6ZUT9 1274 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 CYP4V2Q6ZWL3 525 aaPredicted RBP5.44□□□□□ -1.54
SPG11-220ENST00000559933 GAREM2Q75VX8 874 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 SLC26A9Q7LBE3 791 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 ANKS1BQ7Z6G8 1248 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 DAAM2Q86T65 1068 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 TCEAL8Q8IYN2 117 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms