RNA–Protein interactions for RNA: ENST00000559891.1

TM2D3-208, Transcript of TM2 domain containing 3, humanhuman

TSL 1 (best)

Gene TM2D3, Length 2,133 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-208ENST00000559891 HES6Q96HZ4 224 aa12.01□□□□□ -0.49
TM2D3-208ENST00000559891 KRT12Q99456 494 aa12.01□□□□□ -0.49
TM2D3-208ENST00000559891 HERPUD2Q9BSE4 406 aa12.01□□□□□ -0.49
TM2D3-208ENST00000559891 SNRNP25Q9BV90 132 aaKnown RBP12.01□□□□□ -0.49
TM2D3-208ENST00000559891 KLF16Q9BXK1 252 aaPredicted RBP12.01□□□□□ -0.49
TM2D3-208ENST00000559891 TKTL2Q9H0I9 626 aa12.01□□□□□ -0.49
TM2D3-208ENST00000559891 ESYT3A0FGR9 886 aa12□□□□□ -0.49
TM2D3-208ENST00000559891 GRXCR2A6NFK2 248 aa12□□□□□ -0.49
TM2D3-208ENST00000559891 SRRM3A6NNA2 597 aaPredicted RBP12□□□□□ -0.49
TM2D3-208ENST00000559891 NDUFAB1O14561 156 aa12□□□□□ -0.49
TM2D3-208ENST00000559891 HSPA9P38646 679 aaKnown RBP12□□□□□ -0.49
TM2D3-208ENST00000559891 VIPR2P41587 438 aa12□□□□□ -0.49
TM2D3-208ENST00000559891 CXCR3P49682 368 aa12□□□□□ -0.49
TM2D3-208ENST00000559891 TBX4P57082 545 aa12□□□□□ -0.49
TM2D3-208ENST00000559891 ARTNQ5T4W7 220 aa12□□□□□ -0.49
TM2D3-208ENST00000559891 STRADAQ7RTN6 431 aa12□□□□□ -0.49
TM2D3-208ENST00000559891 CMTM8Q8IZV2 173 aa12□□□□□ -0.49
TM2D3-208ENST00000559891 SH2D3CQ8N5H7 860 aa12□□□□□ -0.49
TM2D3-208ENST00000559891 SMRP1Q8NCR6 262 aa12□□□□□ -0.49
TM2D3-208ENST00000559891 GADD45GIP1Q8TAE8 222 aaPredicted RBP12□□□□□ -0.49
TM2D3-208ENST00000559891 USP13Q92995 863 aaPredicted RBP12□□□□□ -0.49
TM2D3-208ENST00000559891 RNF34Q969K3 372 aa12□□□□□ -0.49
TM2D3-208ENST00000559891 RNF25Q96BH1 459 aaPredicted RBP12□□□□□ -0.49
TM2D3-208ENST00000559891 PGAP3Q96FM1 320 aaPredicted RBP12□□□□□ -0.49
TM2D3-208ENST00000559891 DNMT3LQ9UJW3 386 aa12□□□□□ -0.49
TM2D3-208ENST00000559891 AMFRQ9UKV5 643 aa12□□□□□ -0.49
TM2D3-208ENST00000559891 HMGB1P1B2RPK0 211 aaPredicted RBP11.99□□□□□ -0.49
TM2D3-208ENST00000559891 TRDMT1O14717 391 aaKnown RBP11.99□□□□□ -0.49
TM2D3-208ENST00000559891 GREM1O60565 184 aa11.99□□□□□ -0.49
TM2D3-208ENST00000559891 STC2O76061 302 aa11.99□□□□□ -0.49
TM2D3-208ENST00000559891 FSHRP23945 695 aa11.99□□□□□ -0.49
TM2D3-208ENST00000559891 MAN1A1P33908 653 aa11.99□□□□□ -0.49
TM2D3-208ENST00000559891 TFF2Q03403 129 aa11.99□□□□□ -0.49
TM2D3-208ENST00000559891 ADCY2Q08462 1091 aa11.99□□□□□ -0.49
TM2D3-208ENST00000559891 MMRN1Q13201 1228 aa11.99□□□□□ -0.49
TM2D3-208ENST00000559891 IFI16Q16666 785 aaKnown RBP11.99□□□□□ -0.49
TM2D3-208ENST00000559891 FAM182AQ5T1J6 154 aa11.99□□□□□ -0.49
TM2D3-208ENST00000559891 TTC19Q6DKK2 380 aaPredicted RBP11.99□□□□□ -0.49
TM2D3-208ENST00000559891 ARID3BQ8IVW6 561 aaPredicted RBP11.99□□□□□ -0.49
TM2D3-208ENST00000559891 NETO2Q8NC67 525 aa11.99□□□□□ -0.49
TM2D3-208ENST00000559891 MYADMQ96S97 322 aa11.99□□□□□ -0.49
TM2D3-208ENST00000559891 SIK2Q9H0K1 926 aa11.99□□□□□ -0.49
TM2D3-208ENST00000559891 WDCPQ9H6R7 721 aa11.99□□□□□ -0.49
TM2D3-208ENST00000559891 USP15Q9Y4E8 981 aaPredicted RBP11.99□□□□□ -0.49
TM2D3-208ENST00000559891 CLUHO75153 1309 aa11.99□□□□□ -0.49
TM2D3-208ENST00000559891 RAD51CO43502 376 aa11.99□□□□□ -0.49
TM2D3-208ENST00000559891 PRPSAP2O60256 369 aa11.99□□□□□ -0.49
TM2D3-208ENST00000559891 IGLV3-27P01718 113 aa11.99□□□□□ -0.49
TM2D3-208ENST00000559891 PYGMP11217 842 aa11.99□□□□□ -0.49
TM2D3-208ENST00000559891 HOXB8P17481 243 aaPredicted RBP11.99□□□□□ -0.49
TM2D3-208ENST00000559891 NR1D1P20393 614 aa11.99□□□□□ -0.49
TM2D3-208ENST00000559891 LSP1P33241 339 aa11.99□□□□□ -0.49
TM2D3-208ENST00000559891 CTNNA1P35221 906 aaKnown RBP11.99□□□□□ -0.49
TM2D3-208ENST00000559891 ADRA1BP35368 520 aa11.99□□□□□ -0.49
TM2D3-208ENST00000559891 PCK1P35558 622 aa11.99□□□□□ -0.49
TM2D3-208ENST00000559891 PPP3CCP48454 512 aa11.99□□□□□ -0.49
TM2D3-208ENST00000559891 NUMBP49757 651 aa11.99□□□□□ -0.49
TM2D3-208ENST00000559891 LIG3P49916 1009 aa11.99□□□□□ -0.49
TM2D3-208ENST00000559891 TUBP50607 506 aa11.99□□□□□ -0.49
TM2D3-208ENST00000559891 TRIP4Q15650 581 aaPredicted RBP11.99□□□□□ -0.49
TM2D3-208ENST00000559891 KCTD16Q68DU8 428 aa11.99□□□□□ -0.49
TM2D3-208ENST00000559891 NADSYN1Q6IA69 706 aa11.99□□□□□ -0.49
TM2D3-208ENST00000559891 LRIG3Q6UXM1 1119 aa11.99□□□□□ -0.49
TM2D3-208ENST00000559891 C14orf80Q86SX3 495 aa11.99□□□□□ -0.49
TM2D3-208ENST00000559891 DENND1CQ8IV53 801 aa11.99□□□□□ -0.49
TM2D3-208ENST00000559891 ZSCAN18Q8TBC5 510 aaPredicted RBP11.99□□□□□ -0.49
TM2D3-208ENST00000559891 PBKQ96KB5 322 aa11.99□□□□□ -0.49
TM2D3-208ENST00000559891 ATP6V1G3Q96LB4 118 aa11.99□□□□□ -0.49
TM2D3-208ENST00000559891 SERPINB11Q96P15 392 aa11.99□□□□□ -0.49
TM2D3-208ENST00000559891 GCNAQ96QF7 691 aa11.99□□□□□ -0.49
TM2D3-208ENST00000559891 EPN3Q9H201 632 aa11.99□□□□□ -0.49
TM2D3-208ENST00000559891 TASP1Q9H6P5 420 aa11.99□□□□□ -0.49
TM2D3-208ENST00000559891 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.99□□□□□ -0.49
TM2D3-208ENST00000559891 FZD10Q9ULW2 581 aa11.99□□□□□ -0.49
TM2D3-208ENST00000559891 TLR6Q9Y2C9 796 aa11.99□□□□□ -0.49
TM2D3-208ENST00000559891 PCDHA3Q9Y5H8 950 aa11.99□□□□□ -0.49
TM2D3-208ENST00000559891 KCNU1A8MYU2 1149 aa11.98□□□□□ -0.49
TM2D3-208ENST00000559891 BHMG1C9JSJ3 638 aaPredicted RBP11.98□□□□□ -0.49
TM2D3-208ENST00000559891 PAGE1O75459 146 aa11.98□□□□□ -0.49
TM2D3-208ENST00000559891 POU2F2P09086 479 aa11.98□□□□□ -0.49
TM2D3-208ENST00000559891 SLC1A1P43005 524 aa11.98□□□□□ -0.49
TM2D3-208ENST00000559891 ATP1A2P50993 1020 aa11.98□□□□□ -0.49
TM2D3-208ENST00000559891 VCPP55072 806 aaKnown RBP11.98□□□□□ -0.49
TM2D3-208ENST00000559891 CUL1Q13616 776 aa11.98□□□□□ -0.49
TM2D3-208ENST00000559891 RPS6KA1Q15418 735 aa11.98□□□□□ -0.49
TM2D3-208ENST00000559891 PPP6R3Q5H9R7 873 aaPredicted RBP11.98□□□□□ -0.49
TM2D3-208ENST00000559891 FAM78AQ5JUQ0 283 aa11.98□□□□□ -0.49
TM2D3-208ENST00000559891 ATAT1Q5SQI0 421 aa11.98□□□□□ -0.49
TM2D3-208ENST00000559891 PIK3R6Q5UE93 754 aa11.98□□□□□ -0.49
TM2D3-208ENST00000559891 GPR153Q6NV75 609 aa11.98□□□□□ -0.49
TM2D3-208ENST00000559891 RFWD3Q6PCD5 774 aa11.98□□□□□ -0.49
TM2D3-208ENST00000559891 KLHDC10Q6PID8 442 aa11.98□□□□□ -0.49
TM2D3-208ENST00000559891 ELMSAN1Q6PJG2 1045 aa11.98□□□□□ -0.49
TM2D3-208ENST00000559891 SYCE1Q8N0S2 351 aa11.98□□□□□ -0.49
TM2D3-208ENST00000559891 ACTRT1Q8TDG2 376 aa11.98□□□□□ -0.49
TM2D3-208ENST00000559891 KCTD15Q96SI1 283 aaPredicted RBP11.98□□□□□ -0.49
TM2D3-208ENST00000559891 RPP25Q9BUL9 199 aaKnown RBP11.98□□□□□ -0.49
TM2D3-208ENST00000559891 RABEP2Q9H5N1 569 aa11.98□□□□□ -0.49
TM2D3-208ENST00000559891 DHX35Q9H5Z1 703 aaKnown RBP11.98□□□□□ -0.49
TM2D3-208ENST00000559891 UBE2ZQ9H832 354 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms