RNA–Protein interactions for RNA: ENST00000559793.5

CTDSPL2-208, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-208ENST00000559793 CALCOCO1Q9P1Z2 691 aa8.52□□□□□ -1.05
CTDSPL2-208ENST00000559793 DEC1Q9P2X7 70 aa8.52□□□□□ -1.05
CTDSPL2-208ENST00000559793 CCDC39Q9UFE4 941 aa8.52□□□□□ -1.05
CTDSPL2-208ENST00000559793 FBXO2Q9UK22 296 aaPredicted RBP8.52□□□□□ -1.05
CTDSPL2-208ENST00000559793 R3HCC1Q9Y3T6 440 aaKnown RBP8.52□□□□□ -1.05
CTDSPL2-208ENST00000559793 SRPRBQ9Y5M8 271 aaKnown RBP8.52□□□□□ -1.05
CTDSPL2-208ENST00000559793 CLIC4Q9Y696 253 aa8.52□□□□□ -1.05
CTDSPL2-208ENST00000559793 URB1O60287 2271 aaKnown RBP8.52□□□□□ -1.05
CTDSPL2-208ENST00000559793 ITPR1Q14643 2758 aa8.52□□□□□ -1.05
CTDSPL2-208ENST00000559793 GOLGA4Q13439 2230 aaKnown RBP8.52□□□□□ -1.05
CTDSPL2-208ENST00000559793 CABIN1Q9Y6J0 2220 aa8.52□□□□□ -1.05
CTDSPL2-208ENST00000559793 LAMA5O15230 3695 aa8.51□□□□□ -1.05
CTDSPL2-208ENST00000559793 APC2O95996 2303 aa8.51□□□□□ -1.05
CTDSPL2-208ENST00000559793 HOXC11O43248 304 aaPredicted RBP8.51□□□□□ -1.05
CTDSPL2-208ENST00000559793 GJB3O75712 270 aa8.51□□□□□ -1.05
CTDSPL2-208ENST00000559793 DLGAP3O95886 979 aa8.51□□□□□ -1.05
CTDSPL2-208ENST00000559793 FAM163BP0C2L3 166 aa8.51□□□□□ -1.05
CTDSPL2-208ENST00000559793 NTSR1P30989 418 aa8.51□□□□□ -1.05
CTDSPL2-208ENST00000559793 PGFP49763 221 aa8.51□□□□□ -1.05
CTDSPL2-208ENST00000559793 SCAPQ12770 1279 aa8.51□□□□□ -1.05
CTDSPL2-208ENST00000559793 IFRD2Q12894 506 aaPredicted RBP8.51□□□□□ -1.05
CTDSPL2-208ENST00000559793 ALCAMQ13740 583 aa8.51□□□□□ -1.05
CTDSPL2-208ENST00000559793 RABEP1Q15276 862 aa8.51□□□□□ -1.05
CTDSPL2-208ENST00000559793 SURF1Q15526 300 aa8.51□□□□□ -1.05
CTDSPL2-208ENST00000559793 TRIP6Q15654 476 aaKnown RBP8.51□□□□□ -1.05
CTDSPL2-208ENST00000559793 RPS26P11Q5JNZ5 115 aaPredicted RBP8.51□□□□□ -1.05
CTDSPL2-208ENST00000559793 C10orf76Q5T2E6 689 aa8.51□□□□□ -1.05
CTDSPL2-208ENST00000559793 HECTD3Q5T447 861 aa8.51□□□□□ -1.05
CTDSPL2-208ENST00000559793 SNX30Q5VWJ9 437 aa8.51□□□□□ -1.05
CTDSPL2-208ENST00000559793 BTBD8Q5XKL5 378 aa8.51□□□□□ -1.05
CTDSPL2-208ENST00000559793 ANKRD34AQ69YU3 496 aa8.51□□□□□ -1.05
CTDSPL2-208ENST00000559793 PAQR9Q6ZVX9 377 aa8.51□□□□□ -1.05
CTDSPL2-208ENST00000559793 BRAPQ7Z569 592 aa8.51□□□□□ -1.05
CTDSPL2-208ENST00000559793 DDX42Q86XP3 938 aaKnown RBP eCLIP8.51□□□□□ -1.05
CTDSPL2-208ENST00000559793 WDR49Q8IV35 697 aa8.51□□□□□ -1.05
CTDSPL2-208ENST00000559793 BBS7Q8IWZ6 715 aa8.51□□□□□ -1.05
CTDSPL2-208ENST00000559793 NUP93Q8N1F7 819 aa8.51□□□□□ -1.05
CTDSPL2-208ENST00000559793 TRIML1Q8N9V2 468 aa8.51□□□□□ -1.05
CTDSPL2-208ENST00000559793 OR6B3Q8NGW1 331 aa8.51□□□□□ -1.05
CTDSPL2-208ENST00000559793 SCAMP5Q8TAC9 235 aa8.51□□□□□ -1.05
CTDSPL2-208ENST00000559793 HPS3Q969F9 1004 aa8.51□□□□□ -1.05
CTDSPL2-208ENST00000559793 OTUB2Q96DC9 234 aa8.51□□□□□ -1.05
CTDSPL2-208ENST00000559793 ERLEC1Q96DZ1 483 aa8.51□□□□□ -1.05
CTDSPL2-208ENST00000559793 ZNF419Q96HQ0 510 aaPredicted RBP8.51□□□□□ -1.05
CTDSPL2-208ENST00000559793 TMPRSS13Q9BYE2 586 aa8.51□□□□□ -1.05
CTDSPL2-208ENST00000559793 CCSER2Q9H7U1 834 aa8.51□□□□□ -1.05
CTDSPL2-208ENST00000559793 SPHK2Q9NRA0 654 aa8.51□□□□□ -1.05
CTDSPL2-208ENST00000559793 IL37Q9NZH6 218 aa8.51□□□□□ -1.05
CTDSPL2-208ENST00000559793 SMC3Q9UQE7 1217 aa8.51□□□□□ -1.05
CTDSPL2-208ENST00000559793 IGSF10Q6WRI0 2623 aa8.5□□□□□ -1.05
CTDSPL2-208ENST00000559793 A0A087X0B3 334 aa8.5□□□□□ -1.05
CTDSPL2-208ENST00000559793 A0A1W2PQD8 194 aa8.5□□□□□ -1.05
CTDSPL2-208ENST00000559793 A8MXQ7 604 aa8.5□□□□□ -1.05
CTDSPL2-208ENST00000559793 KIAA0391O15091 583 aaKnown RBP8.5□□□□□ -1.05
CTDSPL2-208ENST00000559793 GREM1O60565 184 aa8.5□□□□□ -1.05
CTDSPL2-208ENST00000559793 SYPP08247 313 aa8.5□□□□□ -1.05
CTDSPL2-208ENST00000559793 ZDHHC11BP0C7U3 371 aa8.5□□□□□ -1.05
CTDSPL2-208ENST00000559793 HOXB2P14652 356 aa8.5□□□□□ -1.05
CTDSPL2-208ENST00000559793 MAOBP27338 520 aa8.5□□□□□ -1.05
CTDSPL2-208ENST00000559793 CDH8P55286 799 aa8.5□□□□□ -1.05
CTDSPL2-208ENST00000559793 HNRNPDQ14103 355 aaKnown RBP8.5□□□□□ -1.05
CTDSPL2-208ENST00000559793 ANO4Q32M45 955 aa8.5□□□□□ -1.05
CTDSPL2-208ENST00000559793 WDR72Q3MJ13 1102 aa8.5□□□□□ -1.05
CTDSPL2-208ENST00000559793 SOWAHCQ53LP3 525 aaPredicted RBP8.5□□□□□ -1.05
CTDSPL2-208ENST00000559793 EGFLAMQ63HQ2 1017 aa8.5□□□□□ -1.05
CTDSPL2-208ENST00000559793 FAM173BQ6P4H8 233 aa8.5□□□□□ -1.05
CTDSPL2-208ENST00000559793 CCNI2Q6ZMN8 369 aaPredicted RBP8.5□□□□□ -1.05
CTDSPL2-208ENST00000559793 TRMT11Q7Z4G4 463 aaKnown RBP8.5□□□□□ -1.05
CTDSPL2-208ENST00000559793 SLCO6A1Q86UG4 719 aa8.5□□□□□ -1.05
CTDSPL2-208ENST00000559793 PNPLA1Q8N8W4 532 aa8.5□□□□□ -1.05
CTDSPL2-208ENST00000559793 TERB1Q8NA31 727 aa8.5□□□□□ -1.05
CTDSPL2-208ENST00000559793 B3GALNT2Q8NCR0 500 aa8.5□□□□□ -1.05
CTDSPL2-208ENST00000559793 FBF1Q8TES7 1133 aa8.5□□□□□ -1.05
CTDSPL2-208ENST00000559793 IPO4Q8TEX9 1081 aaKnown RBP8.5□□□□□ -1.05
CTDSPL2-208ENST00000559793 ADAMTS14Q8WXS8 1223 aa8.5□□□□□ -1.05
CTDSPL2-208ENST00000559793 OVCA2Q8WZ82 227 aa8.5□□□□□ -1.05
CTDSPL2-208ENST00000559793 FBXO32Q969P5 355 aa8.5□□□□□ -1.05
CTDSPL2-208ENST00000559793 HSPA12BQ96MM6 686 aa8.5□□□□□ -1.05
CTDSPL2-208ENST00000559793 DUSP9Q99956 384 aaKnown RBP8.5□□□□□ -1.05
CTDSPL2-208ENST00000559793 ELOVL4Q9GZR5 314 aa8.5□□□□□ -1.05
CTDSPL2-208ENST00000559793 GZF1Q9H116 711 aaPredicted RBP8.5□□□□□ -1.05
CTDSPL2-208ENST00000559793 SLC6A17Q9H1V8 727 aa8.5□□□□□ -1.05
CTDSPL2-208ENST00000559793 CD93Q9NPY3 652 aa8.5□□□□□ -1.05
CTDSPL2-208ENST00000559793 HSPBP1Q9NZL4 362 aa8.5□□□□□ -1.05
CTDSPL2-208ENST00000559793 CYP8B1Q9UNU6 501 aa8.5□□□□□ -1.05
CTDSPL2-208ENST00000559793 SH3BP1Q9Y3L3 701 aa8.5□□□□□ -1.05
CTDSPL2-208ENST00000559793 KNTC1P50748 2209 aa8.5□□□□□ -1.05
CTDSPL2-208ENST00000559793 FREM2Q5SZK8 3169 aa8.5□□□□□ -1.05
CTDSPL2-208ENST00000559793 FAM92AA1XBS5 289 aa8.49□□□□□ -1.05
CTDSPL2-208ENST00000559793 WASH3PC4AMC7 463 aa8.49□□□□□ -1.05
CTDSPL2-208ENST00000559793 PRRT4C9JH25 899 aa8.49□□□□□ -1.05
CTDSPL2-208ENST00000559793 TGFB1I1O43294 461 aa8.49□□□□□ -1.05
CTDSPL2-208ENST00000559793 ZNF217O75362 1048 aa8.49□□□□□ -1.05
CTDSPL2-208ENST00000559793 RTN3O95197 1032 aaPredicted RBP8.49□□□□□ -1.05
CTDSPL2-208ENST00000559793 TBX18O95935 607 aa8.49□□□□□ -1.05
CTDSPL2-208ENST00000559793 CISD3P0C7P0 127 aa8.49□□□□□ -1.05
CTDSPL2-208ENST00000559793 DLATP10515 647 aaKnown RBP8.49□□□□□ -1.05
CTDSPL2-208ENST00000559793 TNNI1P19237 187 aa8.49□□□□□ -1.05
CTDSPL2-208ENST00000559793 MYL6P60660 151 aa8.49□□□□□ -1.05
CTDSPL2-208ENST00000559793 SLC14A1Q13336 389 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms