RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 NXPH1P58417 271 aa11.24□□□□□ -0.61
TRAF3-207ENST00000559734 ST8SIA6P61647 398 aa11.24□□□□□ -0.61
TRAF3-207ENST00000559734 YWHAGP61981 247 aaKnown RBP eCLIP11.24□□□□□ -0.61
TRAF3-207ENST00000559734 SNRPFP62306 86 aaKnown RBP11.24□□□□□ -0.61
TRAF3-207ENST00000559734 GABREP78334 506 aa11.24□□□□□ -0.61
TRAF3-207ENST00000559734 DLG4P78352 724 aa11.24□□□□□ -0.61
TRAF3-207ENST00000559734 EHHADHQ08426 723 aa11.24□□□□□ -0.61
TRAF3-207ENST00000559734 SFSWAPQ12872 951 aaKnown RBP11.24□□□□□ -0.61
TRAF3-207ENST00000559734 CST6Q15828 149 aa11.24□□□□□ -0.61
TRAF3-207ENST00000559734 ZNF394Q53GI3 561 aa11.24□□□□□ -0.61
TRAF3-207ENST00000559734 USP30Q70CQ3 517 aa11.24□□□□□ -0.61
TRAF3-207ENST00000559734 MMAAQ8IVH4 418 aaKnown RBP11.24□□□□□ -0.61
TRAF3-207ENST00000559734 ARHGAP18Q8N392 663 aa11.24□□□□□ -0.61
TRAF3-207ENST00000559734 ZNF276Q8N554 614 aa11.24□□□□□ -0.61
TRAF3-207ENST00000559734 OXR1Q8N573 874 aa11.24□□□□□ -0.61
TRAF3-207ENST00000559734 DCBLD1Q8N8Z6 715 aa11.24□□□□□ -0.61
TRAF3-207ENST00000559734 OR2T34Q8NGX1 318 aa11.24□□□□□ -0.61
TRAF3-207ENST00000559734 PARD3BQ8TEW8 1205 aa11.24□□□□□ -0.61
TRAF3-207ENST00000559734 TMA16Q96EY4 203 aaKnown RBP11.24□□□□□ -0.61
TRAF3-207ENST00000559734 TRIM4Q9C037 500 aa11.24□□□□□ -0.61
TRAF3-207ENST00000559734 RSPH9Q9H1X1 276 aaPredicted RBP11.24□□□□□ -0.61
TRAF3-207ENST00000559734 SLC39A2Q9NP94 309 aa11.24□□□□□ -0.61
TRAF3-207ENST00000559734 TFIP11Q9UBB9 837 aaKnown RBP11.24□□□□□ -0.61
TRAF3-207ENST00000559734 USP3Q9Y6I4 520 aa11.24□□□□□ -0.61
TRAF3-207ENST00000559734 MAST4O15021 2626 aa11.23□□□□□ -0.61
TRAF3-207ENST00000559734 A0A1W2PR77 199 aa11.23□□□□□ -0.61
TRAF3-207ENST00000559734 TBL1XO60907 577 aa11.23□□□□□ -0.61
TRAF3-207ENST00000559734 ASS1P00966 412 aaKnown RBP11.23□□□□□ -0.61
TRAF3-207ENST00000559734 HLA-DRAP01903 254 aa11.23□□□□□ -0.61
TRAF3-207ENST00000559734 RPN1P04843 607 aaKnown RBP11.23□□□□□ -0.61
TRAF3-207ENST00000559734 CASP1P29466 404 aa11.23□□□□□ -0.61
TRAF3-207ENST00000559734 CD70P32970 193 aa11.23□□□□□ -0.61
TRAF3-207ENST00000559734 E2F1Q01094 437 aa11.23□□□□□ -0.61
TRAF3-207ENST00000559734 AMPD3Q01432 767 aa11.23□□□□□ -0.61
TRAF3-207ENST00000559734 KCNJ12Q14500 433 aa11.23□□□□□ -0.61
TRAF3-207ENST00000559734 PKDCCQ504Y2 493 aa11.23□□□□□ -0.61
TRAF3-207ENST00000559734 HS1BP3Q53T59 392 aa11.23□□□□□ -0.61
TRAF3-207ENST00000559734 PPP1R26Q5T8A7 1209 aaPredicted RBP11.23□□□□□ -0.61
TRAF3-207ENST00000559734 C12orf56Q8IXR9 622 aa11.23□□□□□ -0.61
TRAF3-207ENST00000559734 FAM217AQ8IXS0 508 aa11.23□□□□□ -0.61
TRAF3-207ENST00000559734 OR14C36Q8NHC7 312 aa11.23□□□□□ -0.61
TRAF3-207ENST00000559734 WFDC5Q8TCV5 224 aa11.23□□□□□ -0.61
TRAF3-207ENST00000559734 RFFLQ8WZ73 363 aa11.23□□□□□ -0.61
TRAF3-207ENST00000559734 NDRG1Q92597 394 aaKnown RBP11.23□□□□□ -0.61
TRAF3-207ENST00000559734 TAF4BQ92750 862 aa11.23□□□□□ -0.61
TRAF3-207ENST00000559734 WBP1Q96G27 269 aa11.23□□□□□ -0.61
TRAF3-207ENST00000559734 ZNF578Q96N58 590 aaPredicted RBP11.23□□□□□ -0.61
TRAF3-207ENST00000559734 DUSP16Q9BY84 665 aa11.23□□□□□ -0.61
TRAF3-207ENST00000559734 IMPG2Q9BZV3 1241 aa11.23□□□□□ -0.61
TRAF3-207ENST00000559734 DNAI2Q9GZS0 605 aa11.23□□□□□ -0.61
TRAF3-207ENST00000559734 BLZF1Q9H2G9 400 aa11.23□□□□□ -0.61
TRAF3-207ENST00000559734 WDR70Q9NW82 654 aa11.23□□□□□ -0.61
TRAF3-207ENST00000559734 STIM2Q9P246 746 aa11.23□□□□□ -0.61
TRAF3-207ENST00000559734 SCML1Q9UN30 329 aa11.23□□□□□ -0.61
TRAF3-207ENST00000559734 MYLKQ15746 1914 aa11.23□□□□□ -0.61
TRAF3-207ENST00000559734 MSI1O43347 362 aaKnown RBP11.22□□□□□ -0.61
TRAF3-207ENST00000559734 SIGLEC6O43699 453 aa11.22□□□□□ -0.61
TRAF3-207ENST00000559734 ACP1P24666 158 aa11.22□□□□□ -0.61
TRAF3-207ENST00000559734 MAT2AP31153 395 aaKnown RBP11.22□□□□□ -0.61
TRAF3-207ENST00000559734 KNTC1P50748 2209 aa11.22□□□□□ -0.61
TRAF3-207ENST00000559734 TKTL1P51854 596 aa11.22□□□□□ -0.61
TRAF3-207ENST00000559734 ZNF445P59923 1031 aa11.22□□□□□ -0.61
TRAF3-207ENST00000559734 PDE4CQ08493 712 aa11.22□□□□□ -0.61
TRAF3-207ENST00000559734 VAC14Q08AM6 782 aa11.22□□□□□ -0.61
TRAF3-207ENST00000559734 INCA1Q0VD86 236 aa11.22□□□□□ -0.61
TRAF3-207ENST00000559734 TRIP4Q15650 581 aaPredicted RBP11.22□□□□□ -0.61
TRAF3-207ENST00000559734 KNOP1Q1ED39 458 aaKnown RBP11.22□□□□□ -0.61
TRAF3-207ENST00000559734 PROX2Q3B8N5 592 aa11.22□□□□□ -0.61
TRAF3-207ENST00000559734 ZACNQ401N2 412 aa11.22□□□□□ -0.61
TRAF3-207ENST00000559734 KMT5BQ4FZB7 885 aa11.22□□□□□ -0.61
TRAF3-207ENST00000559734 SFMBT2Q5VUG0 894 aa11.22□□□□□ -0.61
TRAF3-207ENST00000559734 KIAA1614Q5VZ46 1190 aa11.22□□□□□ -0.61
TRAF3-207ENST00000559734 UNC13DQ70J99 1090 aa11.22□□□□□ -0.61
TRAF3-207ENST00000559734 SV2AQ7L0J3 742 aa11.22□□□□□ -0.61
TRAF3-207ENST00000559734 TMC6Q7Z403 805 aa11.22□□□□□ -0.61
TRAF3-207ENST00000559734 PIGZQ86VD9 579 aa11.22□□□□□ -0.61
TRAF3-207ENST00000559734 SPATS2Q86XZ4 545 aaKnown RBP11.22□□□□□ -0.61
TRAF3-207ENST00000559734 MFN1Q8IWA4 741 aa11.22□□□□□ -0.61
TRAF3-207ENST00000559734 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.22□□□□□ -0.61
TRAF3-207ENST00000559734 RNF139Q8WU17 664 aa11.22□□□□□ -0.61
TRAF3-207ENST00000559734 EDEM1Q92611 657 aa11.22□□□□□ -0.61
TRAF3-207ENST00000559734 TTC9Q92623 222 aa11.22□□□□□ -0.61
TRAF3-207ENST00000559734 HEXIM2Q96MH2 286 aaKnown RBP11.22□□□□□ -0.61
TRAF3-207ENST00000559734 USP28Q96RU2 1077 aa11.22□□□□□ -0.61
TRAF3-207ENST00000559734 ULBP1Q9BZM6 244 aa11.22□□□□□ -0.61
TRAF3-207ENST00000559734 MMRN2Q9H8L6 949 aa11.22□□□□□ -0.61
TRAF3-207ENST00000559734 UPF2Q9HAU5 1272 aaKnown RBP11.22□□□□□ -0.61
TRAF3-207ENST00000559734 KBTBD4Q9NVX7 518 aa11.22□□□□□ -0.61
TRAF3-207ENST00000559734 CGNQ9P2M7 1197 aaKnown RBP11.22□□□□□ -0.61
TRAF3-207ENST00000559734 SFMBT1Q9UHJ3 866 aa11.22□□□□□ -0.61
TRAF3-207ENST00000559734 KALRNO60229 2985 aa11.22□□□□□ -0.61
TRAF3-207ENST00000559734 TENM4Q6N022 2769 aa11.22□□□□□ -0.61
TRAF3-207ENST00000559734 TBC1D3DA0A087WVF3 549 aa11.21□□□□□ -0.61
TRAF3-207ENST00000559734 TBC1D3IA0A087WXS9 549 aa11.21□□□□□ -0.61
TRAF3-207ENST00000559734 TBC1D3EA0A087X179 549 aa11.21□□□□□ -0.61
TRAF3-207ENST00000559734 TBC1D3KA0A087X1G2 549 aa11.21□□□□□ -0.61
TRAF3-207ENST00000559734 TBC1D3FA6NER0 549 aaPredicted RBP11.21□□□□□ -0.61
TRAF3-207ENST00000559734 TBC1D3LB9A6J9 549 aa11.21□□□□□ -0.61
TRAF3-207ENST00000559734 TRIM38O00635 465 aa11.21□□□□□ -0.61
TRAF3-207ENST00000559734 FFAR2O15552 330 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms