RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 MYO6Q9UM54 1294 aa4.53□□□□□ -1.68
SNX1-205ENST00000559339 KMT2EQ8IZD2 1858 aa4.53□□□□□ -1.68
SNX1-205ENST00000559339 EP300Q09472 2414 aaPredicted RBP4.53□□□□□ -1.68
SNX1-205ENST00000559339 MYH10P35580 1976 aa4.53□□□□□ -1.68
SNX1-205ENST00000559339 ZNF638Q14966 1978 aaKnown RBP4.53□□□□□ -1.68
SNX1-205ENST00000559339 DMDP11532 3685 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 GREB1Q4ZG55 1949 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 COL4A3Q01955 1670 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.52□□□□□ -1.69
SNX1-205ENST00000559339 A0A1B0GTH6 734 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 GOLGA6L7A0A1B0GV03 622 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 A0A1B0GVM2 712 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 TCAF2A6NFQ2 919 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 LRRC53A6NM62 1247 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 PRR5-ARHGAP8B1AHC4 643 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 GOLGA8SH3BPF8 625 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 TRIM24O15164 1050 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 EPHB6O15197 1021 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 TEX33O43247 280 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 AP5Z1O43299 807 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 CBFA2T2O43439 604 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 RNASEH1O60930 286 aaKnown RBP4.52□□□□□ -1.69
SNX1-205ENST00000559339 ADAM23O75077 832 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 PAGE1O75459 146 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 CLDN11O75508 207 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 LUC7L3O95232 432 aaKnown RBP4.52□□□□□ -1.69
SNX1-205ENST00000559339 IGLV3-25P01717 112 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 ASLP04424 464 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 CYP1A1P04798 512 aaPredicted RBP4.52□□□□□ -1.69
SNX1-205ENST00000559339 TPM1P09493 284 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 DLDP09622 509 aaKnown RBP4.52□□□□□ -1.69
SNX1-205ENST00000559339 UNGP13051 313 aaPredicted RBP4.52□□□□□ -1.69
SNX1-205ENST00000559339 PDGFRAP16234 1089 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 TACR2P21452 398 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 TNFAIP3P21580 790 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 SDC4P31431 198 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 SLC6A4P31645 630 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 RDXP35241 583 aaKnown RBP4.52□□□□□ -1.69
SNX1-205ENST00000559339 DPP6P42658 865 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 WASP42768 502 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 SULT1E1P49888 294 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 RPS24P62847 133 aaKnown RBP4.52□□□□□ -1.69
SNX1-205ENST00000559339 NOMO3P69849 1222 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 ARHGAP8P85298 464 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 FANCCQ00597 558 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 FMO1Q01740 532 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 CENPCQ03188 943 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 LMNB2Q03252 620 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 SULT2A1Q06520 285 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 DMWDQ09019 674 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 KLHL30Q0D2K2 578 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 MESP2Q0VG99 397 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 SFSWAPQ12872 951 aaKnown RBP4.52□□□□□ -1.69
SNX1-205ENST00000559339 SRSF5Q13243 272 aaKnown RBP4.52□□□□□ -1.69
SNX1-205ENST00000559339 ZNF177Q13360 481 aaPredicted RBP4.52□□□□□ -1.69
SNX1-205ENST00000559339 SLC12A1Q13621 1099 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 ZNF234Q14588 700 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 NR1I3Q14994 352 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 IQCB1Q15051 598 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 ASIC2Q16515 512 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 TSR1Q2NL82 804 aaKnown RBP4.52□□□□□ -1.69
SNX1-205ENST00000559339 FNDC3BQ53EP0 1204 aaKnown RBP4.52□□□□□ -1.69
SNX1-205ENST00000559339 FAM133BQ5BKY9 247 aaKnown RBP4.52□□□□□ -1.69
SNX1-205ENST00000559339 SPDYCQ5MJ68 293 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 SFMBT2Q5VUG0 894 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 RAP1GAP2Q684P5 730 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 MBLAC2Q68D91 279 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 NADSYN1Q6IA69 706 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 DCUN1D2Q6PH85 259 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 TMEM92Q6UXU6 159 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 SLC36A4Q6YBV0 504 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 MMS22LQ6ZRQ5 1243 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 LPCAT2Q7L5N7 544 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 ADIPOR2Q86V24 386 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 XYLT1Q86Y38 959 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 SFTPA1Q8IWL2 248 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 KIAA2013Q8IYS2 634 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 LGI2Q8N0V4 545 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 CFAP52Q8N1V2 620 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 FAM160A2Q8N612 972 aaPredicted RBP4.52□□□□□ -1.69
SNX1-205ENST00000559339 C12orf50Q8NA57 414 aaPredicted RBP4.52□□□□□ -1.69
SNX1-205ENST00000559339 SLC30A5Q8TAD4 765 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 SLC20A1Q8WUM9 679 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 PRCCQ92733 491 aaPredicted RBP4.52□□□□□ -1.69
SNX1-205ENST00000559339 FOXJ1Q92949 421 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 NT5C3BQ969T7 300 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 PGAP3Q96FM1 320 aaPredicted RBP4.52□□□□□ -1.69
SNX1-205ENST00000559339 ZC3H10Q96K80 434 aaKnown RBP4.52□□□□□ -1.69
SNX1-205ENST00000559339 FCRL2Q96LA5 508 aaPredicted RBP4.52□□□□□ -1.69
SNX1-205ENST00000559339 CFAP57Q96MR6 1250 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 HAPLN3Q96S86 360 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 NPY6RQ99463 290 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 GABRG3Q99928 467 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 AGPAT1Q99943 283 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 C11orf70Q9BRQ4 267 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 FUCA2Q9BTY2 467 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 TPSD1Q9BZJ3 242 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 EDEM3Q9BZQ6 932 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 TKTL2Q9H0I9 626 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 SIK2Q9H0K1 926 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms