RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 FAM72BQ86X60 149 aa15.32■□□□□ 0.04
SNRPA1-207ENST00000559309 SYCE1Q8N0S2 351 aa15.32■□□□□ 0.04
SNRPA1-207ENST00000559309 TRIM58Q8NG06 486 aa15.32■□□□□ 0.04
SNRPA1-207ENST00000559309 FAF2Q96CS3 445 aa15.32■□□□□ 0.04
SNRPA1-207ENST00000559309 TRMT61BQ9BVS5 477 aaKnown RBP15.32■□□□□ 0.04
SNRPA1-207ENST00000559309 RETREG1Q9H6L5 497 aa15.32■□□□□ 0.04
SNRPA1-207ENST00000559309 CD320Q9NPF0 282 aa15.32■□□□□ 0.04
SNRPA1-207ENST00000559309 COX16Q9P0S2 106 aa15.32■□□□□ 0.04
SNRPA1-207ENST00000559309 PPARGC1AQ9UBK2 798 aaKnown RBP15.32■□□□□ 0.04
SNRPA1-207ENST00000559309 PCSK1NQ9UHG2 260 aa15.32■□□□□ 0.04
SNRPA1-207ENST00000559309 AP4E1Q9UPM8 1137 aa15.32■□□□□ 0.04
SNRPA1-207ENST00000559309 HCN4Q9Y3Q4 1203 aa15.32■□□□□ 0.04
SNRPA1-207ENST00000559309 PCDHA3Q9Y5H8 950 aa15.32■□□□□ 0.04
SNRPA1-207ENST00000559309 WNT6Q9Y6F9 365 aa15.32■□□□□ 0.04
SNRPA1-207ENST00000559309 TICRRQ7Z2Z1 1910 aa15.32■□□□□ 0.04
SNRPA1-207ENST00000559309 SHISA7A6NL88 538 aa15.31■□□□□ 0.04
SNRPA1-207ENST00000559309 DDX3YO15523 660 aaKnown RBP15.31■□□□□ 0.04
SNRPA1-207ENST00000559309 HOXC11O43248 304 aaPredicted RBP15.31■□□□□ 0.04
SNRPA1-207ENST00000559309 CYP17A1P05093 508 aa15.31■□□□□ 0.04
SNRPA1-207ENST00000559309 KRT7P08729 469 aa15.31■□□□□ 0.04
SNRPA1-207ENST00000559309 GRM2Q14416 872 aa15.31■□□□□ 0.04
SNRPA1-207ENST00000559309 HADHQ16836 314 aaKnown RBP15.31■□□□□ 0.04
SNRPA1-207ENST00000559309 ATP13A4Q4VNC1 1196 aa15.31■□□□□ 0.04
SNRPA1-207ENST00000559309 RHOT1Q8IXI2 618 aa15.31■□□□□ 0.04
SNRPA1-207ENST00000559309 KATNAL2Q8IYT4 538 aa15.31■□□□□ 0.04
SNRPA1-207ENST00000559309 PYROXD2Q8N2H3 581 aa15.31■□□□□ 0.04
SNRPA1-207ENST00000559309 ST13P5Q8NFI4 369 aaPredicted RBP15.31■□□□□ 0.04
SNRPA1-207ENST00000559309 DNASE1L2Q92874 299 aa15.31■□□□□ 0.04
SNRPA1-207ENST00000559309 IRF7Q92985 503 aa15.31■□□□□ 0.04
SNRPA1-207ENST00000559309 LMLNQ96KR4 655 aa15.31■□□□□ 0.04
SNRPA1-207ENST00000559309 KCTD15Q96SI1 283 aaPredicted RBP15.31■□□□□ 0.04
SNRPA1-207ENST00000559309 SPHK2Q9NRA0 654 aa15.31■□□□□ 0.04
SNRPA1-207ENST00000559309 THG1LQ9NWX6 298 aaKnown RBP15.31■□□□□ 0.04
SNRPA1-207ENST00000559309 DUS2Q9NX74 493 aaKnown RBP15.31■□□□□ 0.04
SNRPA1-207ENST00000559309 RCOR3Q9P2K3 495 aaPredicted RBP15.31■□□□□ 0.04
SNRPA1-207ENST00000559309 OR12D3Q9UGF7 316 aa15.31■□□□□ 0.04
SNRPA1-207ENST00000559309 SLC12A6Q9UHW9 1150 aa15.31■□□□□ 0.04
SNRPA1-207ENST00000559309 HYOU1Q9Y4L1 999 aa15.31■□□□□ 0.04
SNRPA1-207ENST00000559309 CCDC66A2RUB6 948 aa15.3■□□□□ 0.04
SNRPA1-207ENST00000559309 WASH4PA8MWX3 477 aa15.3■□□□□ 0.04
SNRPA1-207ENST00000559309 MIF4GDA9UHW6 222 aaKnown RBP15.3■□□□□ 0.04
SNRPA1-207ENST00000559309 FANCGO15287 622 aa15.3■□□□□ 0.04
SNRPA1-207ENST00000559309 LRIG2O94898 1065 aa15.3■□□□□ 0.04
SNRPA1-207ENST00000559309 MOCS2O96007 188 aaPredicted RBP15.3■□□□□ 0.04
SNRPA1-207ENST00000559309 ASGR2P07307 311 aa15.3■□□□□ 0.04
SNRPA1-207ENST00000559309 ARSAP15289 507 aa15.3■□□□□ 0.04
SNRPA1-207ENST00000559309 MARCKSL1P49006 195 aa15.3■□□□□ 0.04
SNRPA1-207ENST00000559309 SGSHP51688 502 aa15.3■□□□□ 0.04
SNRPA1-207ENST00000559309 TDGQ13569 410 aa15.3■□□□□ 0.04
SNRPA1-207ENST00000559309 DHCR24Q15392 516 aa15.3■□□□□ 0.04
SNRPA1-207ENST00000559309 EFHC2Q5JST6 749 aa15.3■□□□□ 0.04
SNRPA1-207ENST00000559309 KCNT1Q5JUK3 1230 aa15.3■□□□□ 0.04
SNRPA1-207ENST00000559309 RAP1GAP2Q684P5 730 aa15.3■□□□□ 0.04
SNRPA1-207ENST00000559309 TRIM68Q6AZZ1 485 aa15.3■□□□□ 0.04
SNRPA1-207ENST00000559309 SCYL2Q6P3W7 929 aa15.3■□□□□ 0.04
SNRPA1-207ENST00000559309 NLRP14Q86W24 1093 aa15.3■□□□□ 0.04
SNRPA1-207ENST00000559309 TMEM25Q86YD3 366 aa15.3■□□□□ 0.04
SNRPA1-207ENST00000559309 ETFBKMTQ8IXQ9 262 aa15.3■□□□□ 0.04
SNRPA1-207ENST00000559309 ALG3Q92685 438 aa15.3■□□□□ 0.04
SNRPA1-207ENST00000559309 KRT35Q92764 455 aa15.3■□□□□ 0.04
SNRPA1-207ENST00000559309 ATP2A3Q93084 1043 aa15.3■□□□□ 0.04
SNRPA1-207ENST00000559309 RNF34Q969K3 372 aa15.3■□□□□ 0.04
SNRPA1-207ENST00000559309 IGSF8Q969P0 613 aa15.3■□□□□ 0.04
SNRPA1-207ENST00000559309 ZFYVE19Q96K21 471 aa15.3■□□□□ 0.04
SNRPA1-207ENST00000559309 DDX50Q9BQ39 737 aaKnown RBP15.3■□□□□ 0.04
SNRPA1-207ENST00000559309 TLR10Q9BXR5 811 aa15.3■□□□□ 0.04
SNRPA1-207ENST00000559309 ECT2Q9H8V3 914 aa15.3■□□□□ 0.04
SNRPA1-207ENST00000559309 PCDH18Q9HCL0 1135 aa15.3■□□□□ 0.04
SNRPA1-207ENST00000559309 TRMT1Q9NXH9 659 aaKnown RBP15.3■□□□□ 0.04
SNRPA1-207ENST00000559309 MYOFQ9NZM1 2061 aa15.3■□□□□ 0.04
SNRPA1-207ENST00000559309 DUSP12Q9UNI6 340 aa15.3■□□□□ 0.04
SNRPA1-207ENST00000559309 SNX10Q9Y5X0 201 aa15.3■□□□□ 0.04
SNRPA1-207ENST00000559309 TMEM110-MUSTN1A8MSY1 372 aa15.29■□□□□ 0.04
SNRPA1-207ENST00000559309 E9PAM4 449 aa15.29■□□□□ 0.04
SNRPA1-207ENST00000559309 SCAMP3O14828 347 aaKnown RBP15.29■□□□□ 0.04
SNRPA1-207ENST00000559309 NFATC1O95644 943 aa15.29■□□□□ 0.04
SNRPA1-207ENST00000559309 SRFP11831 508 aa15.29■□□□□ 0.04
SNRPA1-207ENST00000559309 HOXD9P28356 352 aaPredicted RBP15.29■□□□□ 0.04
SNRPA1-207ENST00000559309 GDI1P31150 447 aa15.29■□□□□ 0.04
SNRPA1-207ENST00000559309 IFNAR2P48551 515 aa15.29■□□□□ 0.04
SNRPA1-207ENST00000559309 IRAK1P51617 712 aa15.29■□□□□ 0.04
SNRPA1-207ENST00000559309 RUNX3Q13761 415 aa15.29■□□□□ 0.04
SNRPA1-207ENST00000559309 DPYSQ14117 519 aa15.29■□□□□ 0.04
SNRPA1-207ENST00000559309 DPYSL3Q14195 570 aa15.29■□□□□ 0.04
SNRPA1-207ENST00000559309 LY6G5CQ5SRR4 150 aa15.29■□□□□ 0.04
SNRPA1-207ENST00000559309 RFWD3Q6PCD5 774 aa15.29■□□□□ 0.04
SNRPA1-207ENST00000559309 NYAP1Q6ZVC0 841 aa15.29■□□□□ 0.04
SNRPA1-207ENST00000559309 CHST9Q7L1S5 443 aa15.29■□□□□ 0.04
SNRPA1-207ENST00000559309 ANKS1BQ7Z6G8 1248 aa15.29■□□□□ 0.04
SNRPA1-207ENST00000559309 KIAA0907Q7Z7F0 614 aaPredicted RBP15.29■□□□□ 0.04
SNRPA1-207ENST00000559309 PHTF2Q8N3S3 785 aa15.29■□□□□ 0.04
SNRPA1-207ENST00000559309 GPATCH2LQ9NWQ4 482 aa15.29■□□□□ 0.04
SNRPA1-207ENST00000559309 DDX56Q9NY93 547 aaKnown RBP15.29■□□□□ 0.04
SNRPA1-207ENST00000559309 CWC15Q9P013 229 aaKnown RBP15.29■□□□□ 0.04
SNRPA1-207ENST00000559309 AMFRQ9UKV5 643 aa15.29■□□□□ 0.04
SNRPA1-207ENST00000559309 SORCS3Q9UPU3 1222 aa15.29■□□□□ 0.04
SNRPA1-207ENST00000559309 SPOPO43791 374 aa15.28■□□□□ 0.04
SNRPA1-207ENST00000559309 CACNG3O60359 315 aa15.28■□□□□ 0.04
SNRPA1-207ENST00000559309 CD48P09326 243 aa15.28■□□□□ 0.04
SNRPA1-207ENST00000559309 KDELR1P24390 212 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms