RNA–Protein interactions for RNA: ENST00000559119.1

VPS13C-208, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 738 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-208ENST00000559119 RHPN2P1A8MT19 583 aa5.18□□□□□ -1.58
VPS13C-208ENST00000559119 PAPSS2O95340 614 aaPredicted RBP5.18□□□□□ -1.58
VPS13C-208ENST00000559119 S100BP04271 92 aaPredicted RBP5.18□□□□□ -1.58
VPS13C-208ENST00000559119 ACAA1P09110 424 aaPredicted RBP5.18□□□□□ -1.58
VPS13C-208ENST00000559119 IDEP14735 1019 aa5.18□□□□□ -1.58
VPS13C-208ENST00000559119 RFX2P48378 723 aa5.18□□□□□ -1.58
VPS13C-208ENST00000559119 RGS19P49795 217 aa5.18□□□□□ -1.58
VPS13C-208ENST00000559119 PLEKHG6Q3KR16 790 aa5.18□□□□□ -1.58
VPS13C-208ENST00000559119 HMBOX1Q6NT76 420 aa5.18□□□□□ -1.58
VPS13C-208ENST00000559119 TRILQ7L0X0 811 aa5.18□□□□□ -1.58
VPS13C-208ENST00000559119 KRT27Q7Z3Y8 459 aa5.18□□□□□ -1.58
VPS13C-208ENST00000559119 CCDC28AQ8IWP9 274 aa5.18□□□□□ -1.58
VPS13C-208ENST00000559119 MYO1HQ8N1T3 1032 aa5.18□□□□□ -1.58
VPS13C-208ENST00000559119 ELP5Q8TE02 316 aa5.18□□□□□ -1.58
VPS13C-208ENST00000559119 INPP5DQ92835 1189 aa5.18□□□□□ -1.58
VPS13C-208ENST00000559119 PPP1R10Q96QC0 940 aaKnown RBP5.18□□□□□ -1.58
VPS13C-208ENST00000559119 CYSRT1A8MQ03 144 aa5.17□□□□□ -1.58
VPS13C-208ENST00000559119 MDM4O15151 490 aa5.17□□□□□ -1.58
VPS13C-208ENST00000559119 KCNQ3O43525 872 aa5.17□□□□□ -1.58
VPS13C-208ENST00000559119 NFATC1O95644 943 aa5.17□□□□□ -1.58
VPS13C-208ENST00000559119 WNT1P04628 370 aa5.17□□□□□ -1.58
VPS13C-208ENST00000559119 RFPL3SP0C7P2 107 aa5.17□□□□□ -1.58
VPS13C-208ENST00000559119 MYL4P12829 197 aa5.17□□□□□ -1.58
VPS13C-208ENST00000559119 ATP1A4Q13733 1029 aa5.17□□□□□ -1.58
VPS13C-208ENST00000559119 SLC4A8Q2Y0W8 1093 aa5.17□□□□□ -1.58
VPS13C-208ENST00000559119 GFOD2Q3B7J2 385 aa5.17□□□□□ -1.58
VPS13C-208ENST00000559119 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.17□□□□□ -1.58
VPS13C-208ENST00000559119 WASHC2DQ5SRD0 308 aa5.17□□□□□ -1.58
VPS13C-208ENST00000559119 NADSYN1Q6IA69 706 aa5.17□□□□□ -1.58
VPS13C-208ENST00000559119 PARM1Q6UWI2 310 aa5.17□□□□□ -1.58
VPS13C-208ENST00000559119 CYB5R4Q7L1T6 521 aa5.17□□□□□ -1.58
VPS13C-208ENST00000559119 MORC1Q86VD1 984 aa5.17□□□□□ -1.58
VPS13C-208ENST00000559119 NR2C2APQ86WQ0 139 aa5.17□□□□□ -1.58
VPS13C-208ENST00000559119 ISCUQ9H1K1 167 aa5.17□□□□□ -1.58
VPS13C-208ENST00000559119 CD93Q9NPY3 652 aa5.17□□□□□ -1.58
VPS13C-208ENST00000559119 SIRT3Q9NTG7 399 aaPredicted RBP5.17□□□□□ -1.58
VPS13C-208ENST00000559119 B3GNT3Q9Y2A9 372 aa5.17□□□□□ -1.58
VPS13C-208ENST00000559119 VIPP01282 170 aa5.16□□□□□ -1.58
VPS13C-208ENST00000559119 HOXC6P09630 235 aa5.16□□□□□ -1.58
VPS13C-208ENST00000559119 CPA1P15085 419 aa5.16□□□□□ -1.58
VPS13C-208ENST00000559119 RRP1P56182 461 aaKnown RBP5.16□□□□□ -1.58
VPS13C-208ENST00000559119 TTC39AQ5SRH9 613 aa5.16□□□□□ -1.58
VPS13C-208ENST00000559119 C9orf50Q5SZB4 431 aa5.16□□□□□ -1.58
VPS13C-208ENST00000559119 KLHDC7AQ5VTJ3 777 aa5.16□□□□□ -1.58
VPS13C-208ENST00000559119 PIK3AP1Q6ZUJ8 805 aa5.16□□□□□ -1.58
VPS13C-208ENST00000559119 BEND5Q7L4P6 421 aa5.16□□□□□ -1.58
VPS13C-208ENST00000559119 SRFBP1Q8NEF9 429 aaKnown RBP5.16□□□□□ -1.58
VPS13C-208ENST00000559119 C7orf57Q8NEG2 295 aa5.16□□□□□ -1.58
VPS13C-208ENST00000559119 DNASE2BQ8WZ79 361 aa5.16□□□□□ -1.58
VPS13C-208ENST00000559119 NUDT22Q9BRQ3 303 aa5.16□□□□□ -1.58
VPS13C-208ENST00000559119 PCDHAC1Q9H158 963 aa5.16□□□□□ -1.58
VPS13C-208ENST00000559119 PRDM11Q9NQV5 511 aa5.16□□□□□ -1.58
VPS13C-208ENST00000559119 FBXO28Q9NVF7 368 aa5.16□□□□□ -1.58
VPS13C-208ENST00000559119 ZMYND8Q9ULU4 1186 aaPredicted RBP5.16□□□□□ -1.58
VPS13C-208ENST00000559119 FGFR2P21802 821 aa5.15□□□□□ -1.59
VPS13C-208ENST00000559119 TGM2P21980 687 aa5.15□□□□□ -1.59
VPS13C-208ENST00000559119 ROR2Q01974 943 aaKnown RBP5.15□□□□□ -1.59
VPS13C-208ENST00000559119 KIAA1755Q5JYT7 1200 aa5.15□□□□□ -1.59
VPS13C-208ENST00000559119 ASPHD1Q5U4P2 390 aa5.15□□□□□ -1.59
VPS13C-208ENST00000559119 KIAA0408Q6ZU52 694 aa5.15□□□□□ -1.59
VPS13C-208ENST00000559119 CCDC33Q8N5R6 958 aa5.15□□□□□ -1.59
VPS13C-208ENST00000559119 OR52N4Q8NGI2 321 aa5.15□□□□□ -1.59
VPS13C-208ENST00000559119 JDP2Q8WYK2 163 aa5.15□□□□□ -1.59
VPS13C-208ENST00000559119 SNX27Q96L92 541 aa5.15□□□□□ -1.59
VPS13C-208ENST00000559119 ZNF347Q96SE7 839 aa5.15□□□□□ -1.59
VPS13C-208ENST00000559119 SEZ6LQ9BYH1 1024 aa5.15□□□□□ -1.59
VPS13C-208ENST00000559119 SPAG4Q9NPE6 437 aa5.15□□□□□ -1.59
VPS13C-208ENST00000559119 M0QZQ0 153 aa5.14□□□□□ -1.59
VPS13C-208ENST00000559119 TSPAN6O43657 245 aa5.14□□□□□ -1.59
VPS13C-208ENST00000559119 PPP6R2O75170 966 aa5.14□□□□□ -1.59
VPS13C-208ENST00000559119 CNTN5O94779 1100 aa5.14□□□□□ -1.59
VPS13C-208ENST00000559119 KLKB1P03952 638 aa5.14□□□□□ -1.59
VPS13C-208ENST00000559119 GAS1P54826 345 aa5.14□□□□□ -1.59
VPS13C-208ENST00000559119 DSCR9P59020 149 aa5.14□□□□□ -1.59
VPS13C-208ENST00000559119 RPL36AP83881 106 aaKnown RBP5.14□□□□□ -1.59
VPS13C-208ENST00000559119 SLC5A9Q2M3M2 681 aa5.14□□□□□ -1.59
VPS13C-208ENST00000559119 ARHGAP15Q53QZ3 475 aa5.14□□□□□ -1.59
VPS13C-208ENST00000559119 INO80DQ53TQ3 878 aaPredicted RBP5.14□□□□□ -1.59
VPS13C-208ENST00000559119 Q5PR19 223 aa5.14□□□□□ -1.59
VPS13C-208ENST00000559119 RAP1GAP2Q684P5 730 aa5.14□□□□□ -1.59
VPS13C-208ENST00000559119 C16orf89Q6UX73 402 aa5.14□□□□□ -1.59
VPS13C-208ENST00000559119 Q6ZTK2 550 aa5.14□□□□□ -1.59
VPS13C-208ENST00000559119 CTU1Q7Z7A3 348 aaKnown RBP5.14□□□□□ -1.59
VPS13C-208ENST00000559119 TTC30AQ86WT1 665 aa5.14□□□□□ -1.59
VPS13C-208ENST00000559119 PHF21BQ96EK2 531 aa5.14□□□□□ -1.59
VPS13C-208ENST00000559119 GJB4Q9NTQ9 266 aa5.14□□□□□ -1.59
VPS13C-208ENST00000559119 OBP2AQ9NY56 170 aa5.14□□□□□ -1.59
VPS13C-208ENST00000559119 PCDHB7Q9Y5E2 793 aa5.14□□□□□ -1.59
VPS13C-208ENST00000559119 GAGE12JA6NER3 117 aa5.13□□□□□ -1.59
VPS13C-208ENST00000559119 POM121BA6NF01 834 aa5.13□□□□□ -1.59
VPS13C-208ENST00000559119 OR2W5A6NFC9 320 aa5.13□□□□□ -1.59
VPS13C-208ENST00000559119 FOXO6A8MYZ6 492 aa5.13□□□□□ -1.59
VPS13C-208ENST00000559119 PODXLO00592 558 aa5.13□□□□□ -1.59
VPS13C-208ENST00000559119 CYP1A2P05177 515 aa5.13□□□□□ -1.59
VPS13C-208ENST00000559119 SRGAP2BP0DMP2 458 aa5.13□□□□□ -1.59
VPS13C-208ENST00000559119 SLC37A1P57057 533 aa5.13□□□□□ -1.59
VPS13C-208ENST00000559119 FAM177A1Q8N128 213 aaPredicted RBP5.13□□□□□ -1.59
VPS13C-208ENST00000559119 ADPRHL1Q8NDY3 354 aa5.13□□□□□ -1.59
VPS13C-208ENST00000559119 DCLK3Q9C098 648 aa5.13□□□□□ -1.59
VPS13C-208ENST00000559119 MAP6D1Q9H9H5 199 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms