RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 TSPYL1Q9H0U9 437 aa16.42■□□□□ 0.22
CDC42BPB-204ENST00000559043 TLR8Q9NR97 1041 aaKnown RBP16.42■□□□□ 0.22
CDC42BPB-204ENST00000559043 ASNSD1Q9NWL6 643 aa16.42■□□□□ 0.22
CDC42BPB-204ENST00000559043 DENND4CQ5VZ89 1909 aa16.42■□□□□ 0.22
CDC42BPB-204ENST00000559043 H3BQ06 376 aaPredicted RBP16.41■□□□□ 0.22
CDC42BPB-204ENST00000559043 MDM4O15151 490 aa16.41■□□□□ 0.22
CDC42BPB-204ENST00000559043 NCAM1P13591 858 aa16.41■□□□□ 0.22
CDC42BPB-204ENST00000559043 PTPN7P35236 360 aa16.41■□□□□ 0.22
CDC42BPB-204ENST00000559043 CETN2P41208 172 aa16.41■□□□□ 0.22
CDC42BPB-204ENST00000559043 COPS2P61201 443 aa16.41■□□□□ 0.22
CDC42BPB-204ENST00000559043 CCDC14Q49A88 953 aa16.41■□□□□ 0.22
CDC42BPB-204ENST00000559043 DCAF6Q58WW2 860 aa16.41■□□□□ 0.22
CDC42BPB-204ENST00000559043 TNFAIP8L3Q5GJ75 292 aa16.41■□□□□ 0.22
CDC42BPB-204ENST00000559043 C6orf118Q5T5N4 469 aa16.41■□□□□ 0.22
CDC42BPB-204ENST00000559043 ELMSAN1Q6PJG2 1045 aa16.41■□□□□ 0.22
CDC42BPB-204ENST00000559043 ADAM32Q8TC27 787 aa16.41■□□□□ 0.22
CDC42BPB-204ENST00000559043 OVCA2Q8WZ82 227 aa16.41■□□□□ 0.22
CDC42BPB-204ENST00000559043 DDX23Q9BUQ8 820 aaKnown RBP16.41■□□□□ 0.22
CDC42BPB-204ENST00000559043 ATXN3LQ9H3M9 355 aa16.41■□□□□ 0.22
CDC42BPB-204ENST00000559043 RABEP2Q9H5N1 569 aa16.41■□□□□ 0.22
CDC42BPB-204ENST00000559043 CNOT10Q9H9A5 744 aaKnown RBP16.41■□□□□ 0.22
CDC42BPB-204ENST00000559043 CLIC5Q9NZA1 410 aa16.41■□□□□ 0.22
CDC42BPB-204ENST00000559043 TRPM5Q9NZQ8 1165 aa16.41■□□□□ 0.22
CDC42BPB-204ENST00000559043 UXTQ9UBK9 157 aaPredicted RBP16.41■□□□□ 0.22
CDC42BPB-204ENST00000559043 MYO1CO00159 1063 aa16.4■□□□□ 0.22
CDC42BPB-204ENST00000559043 TCF4P15884 667 aa16.4■□□□□ 0.22
CDC42BPB-204ENST00000559043 PDGFRAP16234 1089 aa16.4■□□□□ 0.22
CDC42BPB-204ENST00000559043 MATKP42679 507 aa16.4■□□□□ 0.22
CDC42BPB-204ENST00000559043 CBX2Q14781 532 aaPredicted RBP16.4■□□□□ 0.22
CDC42BPB-204ENST00000559043 C15orf59Q2T9L4 293 aaPredicted RBP16.4■□□□□ 0.22
CDC42BPB-204ENST00000559043 BTBD8Q5XKL5 378 aa16.4■□□□□ 0.22
CDC42BPB-204ENST00000559043 DRICH1Q6PGQ1 229 aaPredicted RBP16.4■□□□□ 0.22
CDC42BPB-204ENST00000559043 DCUN1D2Q6PH85 259 aa16.4■□□□□ 0.22
CDC42BPB-204ENST00000559043 PDZD4Q76G19 769 aaPredicted RBP16.4■□□□□ 0.22
CDC42BPB-204ENST00000559043 ARCQ7LC44 396 aa16.4■□□□□ 0.22
CDC42BPB-204ENST00000559043 ARFGAP1Q8N6T3 406 aa16.4■□□□□ 0.22
CDC42BPB-204ENST00000559043 NT5C3BQ969T7 300 aa16.4■□□□□ 0.22
CDC42BPB-204ENST00000559043 ZSWIM3Q96MP5 696 aa16.4■□□□□ 0.22
CDC42BPB-204ENST00000559043 SLC46A2Q9BY10 475 aa16.4■□□□□ 0.22
CDC42BPB-204ENST00000559043 ABCC13Q9NSE7 274 aa16.4■□□□□ 0.22
CDC42BPB-204ENST00000559043 SFMBT1Q9UHJ3 866 aa16.4■□□□□ 0.22
CDC42BPB-204ENST00000559043 COCHO43405 550 aa16.4■□□□□ 0.22
CDC42BPB-204ENST00000559043 TLR5O60602 858 aa16.4■□□□□ 0.22
CDC42BPB-204ENST00000559043 DAB1O75553 588 aa16.4■□□□□ 0.22
CDC42BPB-204ENST00000559043 FAM107AO95990 144 aa16.4■□□□□ 0.22
CDC42BPB-204ENST00000559043 OAS1P00973 400 aaKnown RBP16.4■□□□□ 0.22
CDC42BPB-204ENST00000559043 SSR1P43307 286 aaKnown RBP16.4■□□□□ 0.22
CDC42BPB-204ENST00000559043 ITGA8P53708 1063 aa16.4■□□□□ 0.22
CDC42BPB-204ENST00000559043 ZXDBP98169 803 aa16.4■□□□□ 0.22
CDC42BPB-204ENST00000559043 TEAD2Q15562 447 aa16.4■□□□□ 0.22
CDC42BPB-204ENST00000559043 ATP13A4Q4VNC1 1196 aa16.4■□□□□ 0.22
CDC42BPB-204ENST00000559043 NLRP14Q86W24 1093 aa16.4■□□□□ 0.22
CDC42BPB-204ENST00000559043 CCDC89Q8N998 374 aa16.4■□□□□ 0.22
CDC42BPB-204ENST00000559043 SMRP1Q8NCR6 262 aa16.4■□□□□ 0.22
CDC42BPB-204ENST00000559043 BBOF1Q8ND07 529 aa16.4■□□□□ 0.22
CDC42BPB-204ENST00000559043 PDZD8Q8NEN9 1154 aa16.4■□□□□ 0.22
CDC42BPB-204ENST00000559043 ING5Q8WYH8 240 aa16.4■□□□□ 0.22
CDC42BPB-204ENST00000559043 CCDC114Q96M63 670 aa16.4■□□□□ 0.22
CDC42BPB-204ENST00000559043 NPY6RQ99463 290 aa16.4■□□□□ 0.22
CDC42BPB-204ENST00000559043 ROPN1BQ9BZX4 212 aaPredicted RBP16.4■□□□□ 0.22
CDC42BPB-204ENST00000559043 CDC42EP4Q9H3Q1 356 aaKnown RBP16.4■□□□□ 0.22
CDC42BPB-204ENST00000559043 ROPN1Q9HAT0 212 aaPredicted RBP16.4■□□□□ 0.22
CDC42BPB-204ENST00000559043 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.4■□□□□ 0.22
CDC42BPB-204ENST00000559043 AGTP01019 485 aa16.39■□□□□ 0.21
CDC42BPB-204ENST00000559043 SRGAP2BP0DMP2 458 aa16.39■□□□□ 0.21
CDC42BPB-204ENST00000559043 CEBPBP17676 345 aa16.39■□□□□ 0.21
CDC42BPB-204ENST00000559043 NOS2P35228 1153 aa16.39■□□□□ 0.21
CDC42BPB-204ENST00000559043 GJC1P36383 396 aa16.39■□□□□ 0.21
CDC42BPB-204ENST00000559043 PSEN1P49768 467 aa16.39■□□□□ 0.21
CDC42BPB-204ENST00000559043 ATXN1P54253 815 aaKnown RBP16.39■□□□□ 0.21
CDC42BPB-204ENST00000559043 CORO7P57737 925 aa16.39■□□□□ 0.21
CDC42BPB-204ENST00000559043 EIF4EBP2Q13542 120 aaPredicted RBP16.39■□□□□ 0.21
CDC42BPB-204ENST00000559043 SKIDA1Q1XH10 827 aa16.39■□□□□ 0.21
CDC42BPB-204ENST00000559043 B4GALNT4Q76KP1 1039 aa16.39■□□□□ 0.21
CDC42BPB-204ENST00000559043 BEND5Q7L4P6 421 aa16.39■□□□□ 0.21
CDC42BPB-204ENST00000559043 MAB21L3Q8N8X9 362 aa16.39■□□□□ 0.21
CDC42BPB-204ENST00000559043 ZNF473Q8WTR7 871 aaKnown RBP16.39■□□□□ 0.21
CDC42BPB-204ENST00000559043 CENPTQ96BT3 561 aa16.39■□□□□ 0.21
CDC42BPB-204ENST00000559043 CCT8L2Q96SF2 557 aa16.39■□□□□ 0.21
CDC42BPB-204ENST00000559043 TBCBQ99426 244 aa16.39■□□□□ 0.21
CDC42BPB-204ENST00000559043 WDR6Q9NNW5 1121 aaKnown RBP16.39■□□□□ 0.21
CDC42BPB-204ENST00000559043 RGS16O15492 202 aaPredicted RBP16.38■□□□□ 0.21
CDC42BPB-204ENST00000559043 TJP3O95049 919 aa16.38■□□□□ 0.21
CDC42BPB-204ENST00000559043 KCNA5P22460 613 aa16.38■□□□□ 0.21
CDC42BPB-204ENST00000559043 CHKAP35790 457 aa16.38■□□□□ 0.21
CDC42BPB-204ENST00000559043 ADCY8P40145 1251 aa16.38■□□□□ 0.21
CDC42BPB-204ENST00000559043 PPP3CCP48454 512 aa16.38■□□□□ 0.21
CDC42BPB-204ENST00000559043 ZNF143P52747 638 aaPredicted RBP16.38■□□□□ 0.21
CDC42BPB-204ENST00000559043 SEC24CP53992 1094 aa16.38■□□□□ 0.21
CDC42BPB-204ENST00000559043 ATP11AP98196 1134 aa16.38■□□□□ 0.21
CDC42BPB-204ENST00000559043 LMNB2Q03252 620 aa16.38■□□□□ 0.21
CDC42BPB-204ENST00000559043 MFSD7Q6UXD7 560 aa16.38■□□□□ 0.21
CDC42BPB-204ENST00000559043 BNIPLQ7Z465 357 aa16.38■□□□□ 0.21
CDC42BPB-204ENST00000559043 RELL1Q8IUW5 271 aa16.38■□□□□ 0.21
CDC42BPB-204ENST00000559043 ARHGAP18Q8N392 663 aa16.38■□□□□ 0.21
CDC42BPB-204ENST00000559043 ARL14EPQ8N8R7 260 aaPredicted RBP16.38■□□□□ 0.21
CDC42BPB-204ENST00000559043 DQX1Q8TE96 717 aaKnown RBP16.38■□□□□ 0.21
CDC42BPB-204ENST00000559043 FNIP1Q8TF40 1166 aa16.38■□□□□ 0.21
CDC42BPB-204ENST00000559043 FAM107BQ9H098 131 aa16.38■□□□□ 0.21
CDC42BPB-204ENST00000559043 UBE2ZQ9H832 354 aaPredicted RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms