RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 CITED4Q96RK1 184 aa8.41□□□□□ -1.06
TRAF3-205ENST00000558700 CIPCQ9C0C6 399 aa8.41□□□□□ -1.06
TRAF3-205ENST00000558700 CD248Q9HCU0 757 aa8.41□□□□□ -1.06
TRAF3-205ENST00000558700 ABCC13Q9NSE7 274 aa8.41□□□□□ -1.06
TRAF3-205ENST00000558700 SUSD2Q9UGT4 822 aa8.41□□□□□ -1.06
TRAF3-205ENST00000558700 CYP8B1Q9UNU6 501 aa8.41□□□□□ -1.06
TRAF3-205ENST00000558700 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.41□□□□□ -1.06
TRAF3-205ENST00000558700 PCDHB4Q9Y5E5 795 aa8.41□□□□□ -1.06
TRAF3-205ENST00000558700 RAD54BQ9Y620 910 aa8.41□□□□□ -1.06
TRAF3-205ENST00000558700 STON1Q9Y6Q2 735 aa8.41□□□□□ -1.06
TRAF3-205ENST00000558700 TPRP12270 2363 aaKnown RBP8.41□□□□□ -1.06
TRAF3-205ENST00000558700 PI4KAP42356 2102 aa8.41□□□□□ -1.06
TRAF3-205ENST00000558700 TYW5A2RUC4 315 aaKnown RBP8.4□□□□□ -1.06
TRAF3-205ENST00000558700 MEI4A8MW99 385 aa8.4□□□□□ -1.06
TRAF3-205ENST00000558700 SART1O43290 800 aaKnown RBP8.4□□□□□ -1.06
TRAF3-205ENST00000558700 MSI1O43347 362 aaKnown RBP8.4□□□□□ -1.06
TRAF3-205ENST00000558700 NDUFS2O75306 463 aa8.4□□□□□ -1.06
TRAF3-205ENST00000558700 FBXO21O94952 628 aa8.4□□□□□ -1.06
TRAF3-205ENST00000558700 SERPINF2P08697 491 aa8.4□□□□□ -1.06
TRAF3-205ENST00000558700 ENGP17813 658 aa8.4□□□□□ -1.06
TRAF3-205ENST00000558700 CSRP1P21291 193 aaKnown RBP8.4□□□□□ -1.06
TRAF3-205ENST00000558700 BRD2P25440 801 aaKnown RBP8.4□□□□□ -1.06
TRAF3-205ENST00000558700 IL12RB1P42701 662 aa8.4□□□□□ -1.06
TRAF3-205ENST00000558700 MAPK8P45983 427 aa8.4□□□□□ -1.06
TRAF3-205ENST00000558700 DAOAP59103 153 aa8.4□□□□□ -1.06
TRAF3-205ENST00000558700 IRX4P78413 519 aa8.4□□□□□ -1.06
TRAF3-205ENST00000558700 GFPT1Q06210 699 aaPredicted RBP8.4□□□□□ -1.06
TRAF3-205ENST00000558700 ZNF33AQ06730 810 aa8.4□□□□□ -1.06
TRAF3-205ENST00000558700 ENPP2Q13822 863 aa8.4□□□□□ -1.06
TRAF3-205ENST00000558700 ZNF234Q14588 700 aa8.4□□□□□ -1.06
TRAF3-205ENST00000558700 ARID5BQ14865 1188 aa8.4□□□□□ -1.06
TRAF3-205ENST00000558700 GEN1Q17RS7 908 aa8.4□□□□□ -1.06
TRAF3-205ENST00000558700 UAP1L1Q3KQV9 507 aa8.4□□□□□ -1.06
TRAF3-205ENST00000558700 FUT11Q495W5 492 aa8.4□□□□□ -1.06
TRAF3-205ENST00000558700 PKDCCQ504Y2 493 aa8.4□□□□□ -1.06
TRAF3-205ENST00000558700 N4BP2L1Q5TBK1 243 aaPredicted RBP8.4□□□□□ -1.06
TRAF3-205ENST00000558700 BSPRYQ5W0U4 402 aa8.4□□□□□ -1.06
TRAF3-205ENST00000558700 NUGGCQ68CJ6 796 aa8.4□□□□□ -1.06
TRAF3-205ENST00000558700 ISM2Q6H9L7 571 aa8.4□□□□□ -1.06
TRAF3-205ENST00000558700 MSANTD2Q6P1R3 559 aa8.4□□□□□ -1.06
TRAF3-205ENST00000558700 SERPINA13PQ6UXR4 307 aa8.4□□□□□ -1.06
TRAF3-205ENST00000558700 FRMD1Q8N878 549 aa8.4□□□□□ -1.06
TRAF3-205ENST00000558700 ZNF557Q8N988 423 aaPredicted RBP8.4□□□□□ -1.06
TRAF3-205ENST00000558700 UBA3Q8TBC4 463 aa8.4□□□□□ -1.06
TRAF3-205ENST00000558700 EDEM1Q92611 657 aa8.4□□□□□ -1.06
TRAF3-205ENST00000558700 MRGPRX1Q96LB2 322 aa8.4□□□□□ -1.06
TRAF3-205ENST00000558700 HSPA12BQ96MM6 686 aa8.4□□□□□ -1.06
TRAF3-205ENST00000558700 SERPINB11Q96P15 392 aa8.4□□□□□ -1.06
TRAF3-205ENST00000558700 THAP10Q9P2Z0 257 aaPredicted RBP8.4□□□□□ -1.06
TRAF3-205ENST00000558700 PILRBQ9UKJ0 227 aa8.4□□□□□ -1.06
TRAF3-205ENST00000558700 SLC6A14Q9UN76 642 aa8.4□□□□□ -1.06
TRAF3-205ENST00000558700 EPG5Q9HCE0 2579 aa8.39□□□□□ -1.07
TRAF3-205ENST00000558700 ADAMTS9Q9P2N4 1935 aa8.39□□□□□ -1.07
TRAF3-205ENST00000558700 CACNA1BQ00975 2339 aa8.39□□□□□ -1.07
TRAF3-205ENST00000558700 YJEFN3A6XGL0 299 aa8.39□□□□□ -1.07
TRAF3-205ENST00000558700 E7ENQ6 273 aa8.39□□□□□ -1.07
TRAF3-205ENST00000558700 BIN1O00499 593 aa8.39□□□□□ -1.07
TRAF3-205ENST00000558700 CDX4O14627 284 aaPredicted RBP8.39□□□□□ -1.07
TRAF3-205ENST00000558700 FGFR1OPO95684 399 aaKnown RBP8.39□□□□□ -1.07
TRAF3-205ENST00000558700 AFPP02771 609 aaKnown RBP8.39□□□□□ -1.07
TRAF3-205ENST00000558700 LTFP02788 710 aa8.39□□□□□ -1.07
TRAF3-205ENST00000558700 SYPP08247 313 aa8.39□□□□□ -1.07
TRAF3-205ENST00000558700 ACADMP11310 421 aa8.39□□□□□ -1.07
TRAF3-205ENST00000558700 CEACAM1P13688 526 aa8.39□□□□□ -1.07
TRAF3-205ENST00000558700 LCP1P13796 627 aa8.39□□□□□ -1.07
TRAF3-205ENST00000558700 GNSP15586 552 aa8.39□□□□□ -1.07
TRAF3-205ENST00000558700 PRKCHP24723 683 aa8.39□□□□□ -1.07
TRAF3-205ENST00000558700 MPSTP25325 297 aa8.39□□□□□ -1.07
TRAF3-205ENST00000558700 HOXD9P28356 352 aaPredicted RBP8.39□□□□□ -1.07
TRAF3-205ENST00000558700 CD6P30203 668 aa8.39□□□□□ -1.07
TRAF3-205ENST00000558700 GGCXP38435 758 aa8.39□□□□□ -1.07
TRAF3-205ENST00000558700 SLC11A2P49281 568 aa8.39□□□□□ -1.07
TRAF3-205ENST00000558700 RGS7P49802 495 aa8.39□□□□□ -1.07
TRAF3-205ENST00000558700 TAGLNQ01995 201 aaKnown RBP8.39□□□□□ -1.07
TRAF3-205ENST00000558700 RING1Q06587 406 aa8.39□□□□□ -1.07
TRAF3-205ENST00000558700 MORC3Q14149 939 aa8.39□□□□□ -1.07
TRAF3-205ENST00000558700 CNGA2Q16280 664 aa8.39□□□□□ -1.07
TRAF3-205ENST00000558700 MEA1Q16626 185 aa8.39□□□□□ -1.07
TRAF3-205ENST00000558700 ST3GAL2Q16842 350 aa8.39□□□□□ -1.07
TRAF3-205ENST00000558700 WDR45BQ5MNZ6 344 aa8.39□□□□□ -1.07
TRAF3-205ENST00000558700 SYCP2LQ5T4T6 812 aa8.39□□□□□ -1.07
TRAF3-205ENST00000558700 SH3PXD2AQ5TCZ1 1133 aa8.39□□□□□ -1.07
TRAF3-205ENST00000558700 SLC41A1Q8IVJ1 513 aa8.39□□□□□ -1.07
TRAF3-205ENST00000558700 TRIM59Q8IWR1 403 aa8.39□□□□□ -1.07
TRAF3-205ENST00000558700 UNC45BQ8IWX7 931 aa8.39□□□□□ -1.07
TRAF3-205ENST00000558700 AHI1Q8N157 1196 aa8.39□□□□□ -1.07
TRAF3-205ENST00000558700 HDDC3Q8N4P3 179 aa8.39□□□□□ -1.07
TRAF3-205ENST00000558700 TRIML1Q8N9V2 468 aa8.39□□□□□ -1.07
TRAF3-205ENST00000558700 SLC35F5Q8WV83 523 aa8.39□□□□□ -1.07
TRAF3-205ENST00000558700 TFAP2BQ92481 460 aa8.39□□□□□ -1.07
TRAF3-205ENST00000558700 NDRG1Q92597 394 aaKnown RBP8.39□□□□□ -1.07
TRAF3-205ENST00000558700 PRCCQ92733 491 aaPredicted RBP8.39□□□□□ -1.07
TRAF3-205ENST00000558700 ERLEC1Q96DZ1 483 aa8.39□□□□□ -1.07
TRAF3-205ENST00000558700 PIWIL1Q96J94 861 aaKnown RBP8.39□□□□□ -1.07
TRAF3-205ENST00000558700 HSFY1Q96LI6 401 aa8.39□□□□□ -1.07
TRAF3-205ENST00000558700 TRIM62Q9BVG3 475 aa8.39□□□□□ -1.07
TRAF3-205ENST00000558700 GTPBP2Q9BX10 602 aaKnown RBP8.39□□□□□ -1.07
TRAF3-205ENST00000558700 IRX2Q9BZI1 471 aaPredicted RBP8.39□□□□□ -1.07
TRAF3-205ENST00000558700 SLC32A1Q9H598 525 aa8.39□□□□□ -1.07
TRAF3-205ENST00000558700 FBRSQ9HAH7 460 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms