RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 CEBPBP17676 345 aa15.36■□□□□ 0.05
VPS18-202ENST00000558474 CHKAP35790 457 aa15.36■□□□□ 0.05
VPS18-202ENST00000558474 MMRN1Q13201 1228 aa15.36■□□□□ 0.05
VPS18-202ENST00000558474 AUHQ13825 339 aaKnown RBP15.36■□□□□ 0.05
VPS18-202ENST00000558474 PAFAH1B3Q15102 231 aaKnown RBP15.36■□□□□ 0.05
VPS18-202ENST00000558474 SIX1Q15475 284 aaPredicted RBP15.36■□□□□ 0.05
VPS18-202ENST00000558474 CCNG2Q16589 344 aa15.36■□□□□ 0.05
VPS18-202ENST00000558474 STXBP5Q5T5C0 1151 aa15.36■□□□□ 0.05
VPS18-202ENST00000558474 DRICH1Q6PGQ1 229 aaPredicted RBP15.36■□□□□ 0.05
VPS18-202ENST00000558474 ANKS1BQ7Z6G8 1248 aa15.36■□□□□ 0.05
VPS18-202ENST00000558474 ZNF683Q8IZ20 524 aa15.36■□□□□ 0.05
VPS18-202ENST00000558474 MICALL1Q8N3F8 863 aa15.36■□□□□ 0.05
VPS18-202ENST00000558474 CPXM2Q8N436 756 aa15.36■□□□□ 0.05
VPS18-202ENST00000558474 PQLC3Q8N755 202 aa15.36■□□□□ 0.05
VPS18-202ENST00000558474 E2F7Q96AV8 911 aa15.36■□□□□ 0.05
VPS18-202ENST00000558474 OTUB2Q96DC9 234 aa15.36■□□□□ 0.05
VPS18-202ENST00000558474 LRCH3Q96II8 777 aa15.36■□□□□ 0.05
VPS18-202ENST00000558474 CARD6Q9BX69 1037 aa15.36■□□□□ 0.05
VPS18-202ENST00000558474 HEMGNQ9BXL5 484 aa15.36■□□□□ 0.05
VPS18-202ENST00000558474 SIK2Q9H0K1 926 aa15.36■□□□□ 0.05
VPS18-202ENST00000558474 SLITRK6Q9H5Y7 841 aa15.36■□□□□ 0.05
VPS18-202ENST00000558474 LRRC19Q9H756 370 aa15.36■□□□□ 0.05
VPS18-202ENST00000558474 TRPV4Q9HBA0 871 aa15.36■□□□□ 0.05
VPS18-202ENST00000558474 ARHGEF4Q9NR80 690 aa15.36■□□□□ 0.05
VPS18-202ENST00000558474 TMPRSS4Q9NRS4 437 aa15.36■□□□□ 0.05
VPS18-202ENST00000558474 FEZ2Q9UHY8 353 aaPredicted RBP15.36■□□□□ 0.05
VPS18-202ENST00000558474 AGO1Q9UL18 857 aaKnown RBP15.36■□□□□ 0.05
VPS18-202ENST00000558474 DOCK4Q8N1I0 1966 aa15.36■□□□□ 0.05
VPS18-202ENST00000558474 DOCK6Q96HP0 2047 aa15.36■□□□□ 0.05
VPS18-202ENST00000558474 MYO9BQ13459 2157 aa15.35■□□□□ 0.05
VPS18-202ENST00000558474 FAM72CH0Y354 149 aa15.35■□□□□ 0.05
VPS18-202ENST00000558474 DCLK1O15075 740 aa15.35■□□□□ 0.05
VPS18-202ENST00000558474 KLKB1P03952 638 aa15.35■□□□□ 0.05
VPS18-202ENST00000558474 RHOQP17081 205 aa15.35■□□□□ 0.05
VPS18-202ENST00000558474 TACR2P21452 398 aa15.35■□□□□ 0.05
VPS18-202ENST00000558474 EPHB2P29323 1055 aa15.35■□□□□ 0.05
VPS18-202ENST00000558474 CHRNA3P32297 505 aa15.35■□□□□ 0.05
VPS18-202ENST00000558474 SERPINB6P35237 376 aa15.35■□□□□ 0.05
VPS18-202ENST00000558474 LTBRP36941 435 aa15.35■□□□□ 0.05
VPS18-202ENST00000558474 ZXDBP98169 803 aa15.35■□□□□ 0.05
VPS18-202ENST00000558474 USP4Q13107 963 aa15.35■□□□□ 0.05
VPS18-202ENST00000558474 FAM133BQ5BKY9 247 aaKnown RBP15.35■□□□□ 0.05
VPS18-202ENST00000558474 RABGAP1LQ5R372 815 aa15.35■□□□□ 0.05
VPS18-202ENST00000558474 FAM72AQ5TYM5 149 aa15.35■□□□□ 0.05
VPS18-202ENST00000558474 KAZNQ674X7 775 aa15.35■□□□□ 0.05
VPS18-202ENST00000558474 FAM72DQ6L9T8 149 aa15.35■□□□□ 0.05
VPS18-202ENST00000558474 CHSY1Q86X52 802 aa15.35■□□□□ 0.05
VPS18-202ENST00000558474 FAM72BQ86X60 149 aa15.35■□□□□ 0.05
VPS18-202ENST00000558474 DENND1CQ8IV53 801 aa15.35■□□□□ 0.05
VPS18-202ENST00000558474 CELF5Q8N6W0 485 aaKnown RBP15.35■□□□□ 0.05
VPS18-202ENST00000558474 PLD5Q8N7P1 536 aa15.35■□□□□ 0.05
VPS18-202ENST00000558474 ITFG1Q8TB96 612 aa15.35■□□□□ 0.05
VPS18-202ENST00000558474 USP13Q92995 863 aaPredicted RBP15.35■□□□□ 0.05
VPS18-202ENST00000558474 ZYG11BQ9C0D3 744 aa15.35■□□□□ 0.05
VPS18-202ENST00000558474 SMPD4Q9NXE4 827 aa15.35■□□□□ 0.05
VPS18-202ENST00000558474 TBC1D14Q9P2M4 693 aa15.35■□□□□ 0.05
VPS18-202ENST00000558474 XPO7Q9UIA9 1087 aaKnown RBP15.35■□□□□ 0.05
VPS18-202ENST00000558474 NEU3Q9UQ49 428 aa15.35■□□□□ 0.05
VPS18-202ENST00000558474 EFCAB8A8MWE9 144 aa15.34■□□□□ 0.05
VPS18-202ENST00000558474 NRG2O14511 850 aaPredicted RBP15.34■□□□□ 0.05
VPS18-202ENST00000558474 SLC9A3R1O14745 358 aaPredicted RBP15.34■□□□□ 0.05
VPS18-202ENST00000558474 NCAM2O15394 837 aa15.34■□□□□ 0.05
VPS18-202ENST00000558474 PHF2O75151 1096 aa15.34■□□□□ 0.05
VPS18-202ENST00000558474 ERCC2P18074 760 aa15.34■□□□□ 0.05
VPS18-202ENST00000558474 FNTAP49354 379 aa15.34■□□□□ 0.05
VPS18-202ENST00000558474 LMNB2Q03252 620 aa15.34■□□□□ 0.05
VPS18-202ENST00000558474 XRCC4Q13426 336 aa15.34■□□□□ 0.05
VPS18-202ENST00000558474 ZNF77Q15935 545 aa15.34■□□□□ 0.05
VPS18-202ENST00000558474 ARTNQ5T4W7 220 aa15.34■□□□□ 0.05
VPS18-202ENST00000558474 RAP1GAP2Q684P5 730 aa15.34■□□□□ 0.05
VPS18-202ENST00000558474 NADSYN1Q6IA69 706 aa15.34■□□□□ 0.05
VPS18-202ENST00000558474 FBXL22Q6P050 247 aa15.34■□□□□ 0.05
VPS18-202ENST00000558474 TMCO3Q6UWJ1 677 aa15.34■□□□□ 0.05
VPS18-202ENST00000558474 ARID3BQ8IVW6 561 aaPredicted RBP15.34■□□□□ 0.05
VPS18-202ENST00000558474 NPAS3Q8IXF0 933 aa15.34■□□□□ 0.05
VPS18-202ENST00000558474 MMGT1Q8N4V1 131 aa15.34■□□□□ 0.05
VPS18-202ENST00000558474 PRELID2Q8N945 189 aa15.34■□□□□ 0.05
VPS18-202ENST00000558474 SMRP1Q8NCR6 262 aa15.34■□□□□ 0.05
VPS18-202ENST00000558474 SH3RF2Q8TEC5 729 aa15.34■□□□□ 0.05
VPS18-202ENST00000558474 P3H4Q92791 437 aa15.34■□□□□ 0.05
VPS18-202ENST00000558474 FGF13Q92913 245 aa15.34■□□□□ 0.05
VPS18-202ENST00000558474 HERPUD2Q9BSE4 406 aa15.34■□□□□ 0.05
VPS18-202ENST00000558474 MAGEB5Q9BZ81 275 aa15.34■□□□□ 0.05
VPS18-202ENST00000558474 BRD8Q9H0E9 1235 aa15.34■□□□□ 0.05
VPS18-202ENST00000558474 CFAP97Q9P2B7 532 aa15.34■□□□□ 0.05
VPS18-202ENST00000558474 CDH7Q9ULB5 785 aa15.34■□□□□ 0.05
VPS18-202ENST00000558474 LAMA3Q16787 3333 aa15.33■□□□□ 0.05
VPS18-202ENST00000558474 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.33■□□□□ 0.04
VPS18-202ENST00000558474 TCRBV7S2A1N4TA0A589 114 aa15.33■□□□□ 0.04
VPS18-202ENST00000558474 TYW5A2RUC4 315 aaKnown RBP15.33■□□□□ 0.04
VPS18-202ENST00000558474 GFRA2O00451 464 aa15.33■□□□□ 0.04
VPS18-202ENST00000558474 RIOK3O14730 519 aaKnown RBP15.33■□□□□ 0.04
VPS18-202ENST00000558474 IRF1P10914 325 aa15.33■□□□□ 0.04
VPS18-202ENST00000558474 AMPD1P23109 780 aa15.33■□□□□ 0.04
VPS18-202ENST00000558474 MAPKAPK2P49137 400 aa15.33■□□□□ 0.04
VPS18-202ENST00000558474 DLX2Q07687 328 aaPredicted RBP15.33■□□□□ 0.04
VPS18-202ENST00000558474 ADCY2Q08462 1091 aa15.33■□□□□ 0.04
VPS18-202ENST00000558474 NOMO1Q15155 1222 aa15.33■□□□□ 0.04
VPS18-202ENST00000558474 GLE1Q53GS7 698 aaKnown RBP15.33■□□□□ 0.04
VPS18-202ENST00000558474 MPP7Q5T2T1 576 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms