RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 SIK2Q9H0K1 926 aa12.79□□□□□ -0.36
SMAD3-205ENST00000558428 ISCUQ9H1K1 167 aa12.79□□□□□ -0.36
SMAD3-205ENST00000558428 DEF6Q9H4E7 631 aa12.79□□□□□ -0.36
SMAD3-205ENST00000558428 PRMT8Q9NR22 394 aaPredicted RBP12.79□□□□□ -0.36
SMAD3-205ENST00000558428 PARVAQ9NVD7 372 aa12.79□□□□□ -0.36
SMAD3-205ENST00000558428 C2orf42Q9NWW7 574 aa12.79□□□□□ -0.36
SMAD3-205ENST00000558428 ARHGEF38Q9NXL2 777 aa12.79□□□□□ -0.36
SMAD3-205ENST00000558428 CNOT8Q9UFF9 292 aaKnown RBP12.79□□□□□ -0.36
SMAD3-205ENST00000558428 FBXO4Q9UKT5 387 aa12.79□□□□□ -0.36
SMAD3-205ENST00000558428 SLC27A6Q9Y2P4 619 aa12.79□□□□□ -0.36
SMAD3-205ENST00000558428 HS3ST4Q9Y661 456 aa12.79□□□□□ -0.36
SMAD3-205ENST00000558428 VPS13AQ96RL7 3174 aa12.79□□□□□ -0.36
SMAD3-205ENST00000558428 A0A087X0T9 212 aa12.78□□□□□ -0.36
SMAD3-205ENST00000558428 PRRT4C9JH25 899 aa12.78□□□□□ -0.36
SMAD3-205ENST00000558428 CCP110O43303 1012 aa12.78□□□□□ -0.36
SMAD3-205ENST00000558428 PAGE1O75459 146 aa12.78□□□□□ -0.36
SMAD3-205ENST00000558428 ENDOD1O94919 500 aa12.78□□□□□ -0.36
SMAD3-205ENST00000558428 FAM228BP0C875 321 aa12.78□□□□□ -0.36
SMAD3-205ENST00000558428 SP9P0CG40 484 aa12.78□□□□□ -0.36
SMAD3-205ENST00000558428 MYBL1P10243 752 aa12.78□□□□□ -0.36
SMAD3-205ENST00000558428 DESP17661 470 aa12.78□□□□□ -0.36
SMAD3-205ENST00000558428 KIR2DL1P43626 348 aaPredicted RBP12.78□□□□□ -0.36
SMAD3-205ENST00000558428 ZNF143P52747 638 aaPredicted RBP12.78□□□□□ -0.36
SMAD3-205ENST00000558428 MAMLD1Q13495 774 aa12.78□□□□□ -0.36
SMAD3-205ENST00000558428 GEN1Q17RS7 908 aa12.78□□□□□ -0.36
SMAD3-205ENST00000558428 RAB6CQ53S08 254 aa12.78□□□□□ -0.36
SMAD3-205ENST00000558428 RABGAP1LQ5R372 815 aa12.78□□□□□ -0.36
SMAD3-205ENST00000558428 SH3PXD2AQ5TCZ1 1133 aa12.78□□□□□ -0.36
SMAD3-205ENST00000558428 PLEKHA7Q6IQ23 1121 aa12.78□□□□□ -0.36
SMAD3-205ENST00000558428 ALKBH5Q6P6C2 394 aaKnown RBP12.78□□□□□ -0.36
SMAD3-205ENST00000558428 TSSK4Q6SA08 328 aa12.78□□□□□ -0.36
SMAD3-205ENST00000558428 STRADAQ7RTN6 431 aa12.78□□□□□ -0.36
SMAD3-205ENST00000558428 ANKS1BQ7Z6G8 1248 aa12.78□□□□□ -0.36
SMAD3-205ENST00000558428 MFN1Q8IWA4 741 aa12.78□□□□□ -0.36
SMAD3-205ENST00000558428 CCDC117Q8IWD4 279 aaPredicted RBP12.78□□□□□ -0.36
SMAD3-205ENST00000558428 CFAP52Q8N1V2 620 aa12.78□□□□□ -0.36
SMAD3-205ENST00000558428 CARNMT1Q8N4J0 409 aa12.78□□□□□ -0.36
SMAD3-205ENST00000558428 CCDC33Q8N5R6 958 aa12.78□□□□□ -0.36
SMAD3-205ENST00000558428 ZNF513Q8N8E2 541 aaPredicted RBP12.78□□□□□ -0.36
SMAD3-205ENST00000558428 WFDC5Q8TCV5 224 aa12.78□□□□□ -0.36
SMAD3-205ENST00000558428 FAM172AQ8WUF8 416 aa12.78□□□□□ -0.36
SMAD3-205ENST00000558428 RPRD1AQ96P16 312 aaPredicted RBP12.78□□□□□ -0.36
SMAD3-205ENST00000558428 RAB6CQ9H0N0 254 aa12.78□□□□□ -0.36
SMAD3-205ENST00000558428 IRF2BPLQ9H1B7 796 aa12.78□□□□□ -0.36
SMAD3-205ENST00000558428 ZDHHC4Q9NPG8 344 aa12.78□□□□□ -0.36
SMAD3-205ENST00000558428 ANLNQ9NQW6 1124 aa12.78□□□□□ -0.36
SMAD3-205ENST00000558428 TMPRSS4Q9NRS4 437 aa12.78□□□□□ -0.36
SMAD3-205ENST00000558428 MYO1AQ9UBC5 1043 aa12.78□□□□□ -0.36
SMAD3-205ENST00000558428 VANGL2Q9ULK5 521 aa12.78□□□□□ -0.36
SMAD3-205ENST00000558428 SLC8A2Q9UPR5 921 aa12.78□□□□□ -0.36
SMAD3-205ENST00000558428 SCINQ9Y6U3 715 aa12.78□□□□□ -0.36
SMAD3-205ENST00000558428 DOCK4Q8N1I0 1966 aa12.78□□□□□ -0.36
SMAD3-205ENST00000558428 FANCMQ8IYD8 2048 aa12.78□□□□□ -0.36
SMAD3-205ENST00000558428 SSU72P8A0A1W2PR75 194 aa12.77□□□□□ -0.37
SMAD3-205ENST00000558428 I6L893 689 aaPredicted RBP12.77□□□□□ -0.37
SMAD3-205ENST00000558428 KLF8O95600 359 aaPredicted RBP12.77□□□□□ -0.37
SMAD3-205ENST00000558428 HLA-FP30511 346 aa12.77□□□□□ -0.37
SMAD3-205ENST00000558428 MAPK8IP2Q13387 824 aaPredicted RBP12.77□□□□□ -0.37
SMAD3-205ENST00000558428 CDH18Q13634 790 aa12.77□□□□□ -0.37
SMAD3-205ENST00000558428 AUHQ13825 339 aaKnown RBP12.77□□□□□ -0.37
SMAD3-205ENST00000558428 DMC1Q14565 340 aa12.77□□□□□ -0.37
SMAD3-205ENST00000558428 ARL13BQ3SXY8 428 aa12.77□□□□□ -0.37
SMAD3-205ENST00000558428 CCDC122Q5T0U0 273 aa12.77□□□□□ -0.37
SMAD3-205ENST00000558428 TTC39BQ5VTQ0 682 aaPredicted RBP12.77□□□□□ -0.37
SMAD3-205ENST00000558428 RNF43Q68DV7 783 aa12.77□□□□□ -0.37
SMAD3-205ENST00000558428 FBXL22Q6P050 247 aa12.77□□□□□ -0.37
SMAD3-205ENST00000558428 ALLCQ8N6M5 410 aa12.77□□□□□ -0.37
SMAD3-205ENST00000558428 ZNF557Q8N988 423 aaPredicted RBP12.77□□□□□ -0.37
SMAD3-205ENST00000558428 IL17RCQ8NAC3 791 aa12.77□□□□□ -0.37
SMAD3-205ENST00000558428 TXNDC5Q8NBS9 432 aaKnown RBP12.77□□□□□ -0.37
SMAD3-205ENST00000558428 CENPIQ92674 756 aaPredicted RBP12.77□□□□□ -0.37
SMAD3-205ENST00000558428 ATOH1Q92858 354 aaPredicted RBP12.77□□□□□ -0.37
SMAD3-205ENST00000558428 ABCB8Q9NUT2 735 aa12.77□□□□□ -0.37
SMAD3-205ENST00000558428 POLR3BQ9NW08 1133 aaPredicted RBP12.77□□□□□ -0.37
SMAD3-205ENST00000558428 STARD13Q9Y3M8 1113 aa12.77□□□□□ -0.37
SMAD3-205ENST00000558428 ARIH1Q9Y4X5 557 aaPredicted RBP12.77□□□□□ -0.37
SMAD3-205ENST00000558428 SNX10Q9Y5X0 201 aa12.77□□□□□ -0.37
SMAD3-205ENST00000558428 DMDP11532 3685 aa12.77□□□□□ -0.37
SMAD3-205ENST00000558428 MYO15AQ9UKN7 3530 aa12.76□□□□□ -0.37
SMAD3-205ENST00000558428 A0A1B0GVM2 712 aa12.76□□□□□ -0.37
SMAD3-205ENST00000558428 TCAF2A6NFQ2 919 aa12.76□□□□□ -0.37
SMAD3-205ENST00000558428 H0Y626 953 aa12.76□□□□□ -0.37
SMAD3-205ENST00000558428 AKR1B10O60218 316 aa12.76□□□□□ -0.37
SMAD3-205ENST00000558428 LUC7L3O95232 432 aaKnown RBP12.76□□□□□ -0.37
SMAD3-205ENST00000558428 PAPSS2O95340 614 aaPredicted RBP12.76□□□□□ -0.37
SMAD3-205ENST00000558428 CHRM1P11229 460 aaPredicted RBP12.76□□□□□ -0.37
SMAD3-205ENST00000558428 PABPC1P11940 636 aaKnown RBP12.76□□□□□ -0.37
SMAD3-205ENST00000558428 PSMA2P25787 234 aa12.76□□□□□ -0.37
SMAD3-205ENST00000558428 HDAC4P56524 1084 aa12.76□□□□□ -0.37
SMAD3-205ENST00000558428 OGDHQ02218 1023 aa12.76□□□□□ -0.37
SMAD3-205ENST00000558428 GFPT1Q06210 699 aaPredicted RBP12.76□□□□□ -0.37
SMAD3-205ENST00000558428 SLC18A3Q16572 532 aa12.76□□□□□ -0.37
SMAD3-205ENST00000558428 ZNF528Q3MIS6 628 aa12.76□□□□□ -0.37
SMAD3-205ENST00000558428 HSF5Q4G112 596 aaPredicted RBP12.76□□□□□ -0.37
SMAD3-205ENST00000558428 ACBD5Q5T8D3 534 aaPredicted RBP12.76□□□□□ -0.37
SMAD3-205ENST00000558428 EGFLAMQ63HQ2 1017 aa12.76□□□□□ -0.37
SMAD3-205ENST00000558428 SYT13Q7L8C5 426 aa12.76□□□□□ -0.37
SMAD3-205ENST00000558428 TRMT11Q7Z4G4 463 aaKnown RBP12.76□□□□□ -0.37
SMAD3-205ENST00000558428 C14orf80Q86SX3 495 aa12.76□□□□□ -0.37
SMAD3-205ENST00000558428 CIR1Q86X95 450 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms