RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 NRF1Q16656 503 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 NDUFA5Q16718 116 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 MEX3CQ5U5Q3 659 aaKnown RBP11.5□□□□□ -0.57
PCAT29-201ENST00000558411 DARS2Q6PI48 645 aaKnown RBP11.5□□□□□ -0.57
PCAT29-201ENST00000558411 MAMDC4Q6UXC1 1216 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 CAND1Q86VP6 1230 aaKnown RBP11.5□□□□□ -0.57
PCAT29-201ENST00000558411 SNX32Q86XE0 403 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 C10orf107Q8IVU9 208 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 SPATA18Q8TC71 538 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 GRIN3AQ8TCU5 1115 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 FNIP1Q8TF40 1166 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 ZNF606Q8WXB4 792 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 ZNF516Q92618 1163 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 RTP4Q96DX8 246 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 NGLY1Q96IV0 654 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 CCDC138Q96M89 665 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 SLC4A5Q9BY07 1137 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 NCKIPSDQ9NZQ3 722 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 TMEM114B3SHH9 223 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 NOP56O00567 594 aaKnown RBP11.5□□□□□ -0.57
PCAT29-201ENST00000558411 KPNA4O00629 521 aaPredicted RBP11.5□□□□□ -0.57
PCAT29-201ENST00000558411 KLHL41O60662 606 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 C4BPAP04003 597 aaKnown RBP11.5□□□□□ -0.57
PCAT29-201ENST00000558411 RALBP11234 206 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 CYP2C9P11712 490 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 PTPN2P17706 415 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 GABRB3P28472 473 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 MAGEA3P43357 314 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 PSMD8P48556 350 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 NEK2P51955 445 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 ZNF132P52740 706 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 HK2P52789 917 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 ATP1A4Q13733 1029 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 EGFLAMQ63HQ2 1017 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 OGFOD2Q6N063 350 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 SLC39A4Q6P5W5 647 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 C4orf22Q6V702 233 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 ATG14Q6ZNE5 492 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 FRA10AC1Q70Z53 315 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 COLGALT2Q8IYK4 626 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 PCYOX1LQ8NBM8 494 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 PDPRQ8NCN5 879 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 TMEM35BQ8NCS4 154 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 DEPDC1BQ8WUY9 529 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 RSAD1Q9HA92 442 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 CXorf21Q9HAI6 301 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 GPRC5CQ9NQ84 441 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 RAB6BQ9NRW1 208 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 HACD3Q9P035 362 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 COPG2Q9UBF2 871 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 SEPT3Q9UH03 358 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 KAT6AQ92794 2004 aa11.49□□□□□ -0.57
PCAT29-201ENST00000558411 SPDYE2BA6NHP3 402 aa11.49□□□□□ -0.57
PCAT29-201ENST00000558411 CFAP99D6REC4 459 aa11.49□□□□□ -0.57
PCAT29-201ENST00000558411 TRIM38O00635 465 aa11.49□□□□□ -0.57
PCAT29-201ENST00000558411 HTRA2O43464 458 aaPredicted RBP11.49□□□□□ -0.57
PCAT29-201ENST00000558411 LRCH4O75427 683 aa11.49□□□□□ -0.57
PCAT29-201ENST00000558411 STAM2O75886 525 aa11.49□□□□□ -0.57
PCAT29-201ENST00000558411 SPDYE6P0CI01 402 aa11.49□□□□□ -0.57
PCAT29-201ENST00000558411 MX2P20592 715 aa11.49□□□□□ -0.57
PCAT29-201ENST00000558411 ATP2B4P23634 1241 aa11.49□□□□□ -0.57
PCAT29-201ENST00000558411 PSMA2P25787 234 aa11.49□□□□□ -0.57
PCAT29-201ENST00000558411 ARRB2P32121 409 aa11.49□□□□□ -0.57
PCAT29-201ENST00000558411 CDH5P33151 784 aaPredicted RBP11.49□□□□□ -0.57
PCAT29-201ENST00000558411 QARSP47897 775 aaKnown RBP11.49□□□□□ -0.57
PCAT29-201ENST00000558411 BMXP51813 675 aa11.49□□□□□ -0.57
PCAT29-201ENST00000558411 GALNT2Q10471 571 aa11.49□□□□□ -0.57
PCAT29-201ENST00000558411 IKQ13123 557 aaPredicted RBP11.49□□□□□ -0.57
PCAT29-201ENST00000558411 DMP1Q13316 513 aaPredicted RBP11.49□□□□□ -0.57
PCAT29-201ENST00000558411 NAB1Q13506 487 aa11.49□□□□□ -0.57
PCAT29-201ENST00000558411 NR1D2Q14995 579 aa11.49□□□□□ -0.57
PCAT29-201ENST00000558411 SPDYE2Q495Y8 402 aa11.49□□□□□ -0.57
PCAT29-201ENST00000558411 SMYD5Q6GMV2 418 aa11.49□□□□□ -0.57
PCAT29-201ENST00000558411 CMASQ8NFW8 434 aaPredicted RBP11.49□□□□□ -0.57
PCAT29-201ENST00000558411 ASB9Q96DX5 294 aa11.49□□□□□ -0.57
PCAT29-201ENST00000558411 EBNA1BP2Q99848 306 aaKnown RBP11.49□□□□□ -0.57
PCAT29-201ENST00000558411 PSD2Q9BQI7 771 aa11.49□□□□□ -0.57
PCAT29-201ENST00000558411 NPLQ9BXD5 320 aaPredicted RBP11.49□□□□□ -0.57
PCAT29-201ENST00000558411 ARMC7Q9H6L4 198 aa11.49□□□□□ -0.57
PCAT29-201ENST00000558411 WDR41Q9HAD4 459 aa11.49□□□□□ -0.57
PCAT29-201ENST00000558411 PRDM16Q9HAZ2 1276 aa11.49□□□□□ -0.57
PCAT29-201ENST00000558411 TCF7L2Q9NQB0 619 aa11.49□□□□□ -0.57
PCAT29-201ENST00000558411 MAN1C1Q9NR34 630 aa11.49□□□□□ -0.57
PCAT29-201ENST00000558411 UTP6Q9NYH9 597 aaKnown RBP11.49□□□□□ -0.57
PCAT29-201ENST00000558411 SUCOQ9UBS9 1254 aaKnown RBP11.49□□□□□ -0.57
PCAT29-201ENST00000558411 PACSIN3Q9UKS6 424 aa11.49□□□□□ -0.57
PCAT29-201ENST00000558411 CDC14AQ9UNH5 594 aa11.49□□□□□ -0.57
PCAT29-201ENST00000558411 PCDHA11Q9Y5I1 949 aa11.49□□□□□ -0.57
PCAT29-201ENST00000558411 TANC1Q9C0D5 1861 aa11.49□□□□□ -0.57
PCAT29-201ENST00000558411 LSM1O15116 133 aaKnown RBP11.48□□□□□ -0.57
PCAT29-201ENST00000558411 AQP9O43315 295 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 H2AFYO75367 372 aaKnown RBP11.48□□□□□ -0.57
PCAT29-201ENST00000558411 TOP3BO95985 862 aaKnown RBP11.48□□□□□ -0.57
PCAT29-201ENST00000558411 NFKBIAP25963 317 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 IL1R2P27930 398 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 SSTR3P32745 418 aaPredicted RBP11.48□□□□□ -0.57
PCAT29-201ENST00000558411 NPTX2P47972 431 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 CDH15P55291 814 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 GTF2IP78347 998 aa11.48□□□□□ -0.57
PCAT29-201ENST00000558411 GRSF1Q12849 480 aaKnown RBP eCLIP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms