RNA–Protein interactions for RNA: ENST00000558270.1

INO80-204, Transcript of INO80 complex subunit, human

TSL 2

Gene INO80, Length 888 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
INO80-204	ENST00000558270	RAD23B	P54727	409 aa		11.64	□□□□□ -0.55
INO80-204	ENST00000558270	C21orf59	P57076	290 aa		11.64	□□□□□ -0.55
INO80-204	ENST00000558270	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	11.64	□□□□□ -0.55
INO80-204	ENST00000558270	TTI2	Q6NXR4	508 aa		11.64	□□□□□ -0.55
INO80-204	ENST00000558270	FBXL19	Q6PCT2	694 aa		11.64	□□□□□ -0.55
INO80-204	ENST00000558270	LAYN	Q6UX15	382 aa		11.64	□□□□□ -0.55
INO80-204	ENST00000558270	CACUL1	Q86Y37	369 aa		11.64	□□□□□ -0.55
INO80-204	ENST00000558270	GATAD2A	Q86YP4	633 aa		11.64	□□□□□ -0.55
INO80-204	ENST00000558270	UBR7	Q8N806	425 aa		11.64	□□□□□ -0.55
INO80-204	ENST00000558270	SLC4A11	Q8NBS3	891 aa		11.64	□□□□□ -0.55
INO80-204	ENST00000558270	FBXL13	Q8NEE6	735 aa		11.64	□□□□□ -0.55
INO80-204	ENST00000558270	PDZD8	Q8NEN9	1154 aa		11.64	□□□□□ -0.55
INO80-204	ENST00000558270	OVCA2	Q8WZ82	227 aa		11.64	□□□□□ -0.55
INO80-204	ENST00000558270	SLC35C1	Q96A29	364 aa		11.64	□□□□□ -0.55
INO80-204	ENST00000558270	CYFIP2	Q96F07	1278 aa		11.64	□□□□□ -0.55
INO80-204	ENST00000558270	NMUR1	Q9HB89	426 aa		11.64	□□□□□ -0.55
INO80-204	ENST00000558270	OSGEP	Q9NPF4	335 aa		11.64	□□□□□ -0.55
INO80-204	ENST00000558270	RAB20	Q9NX57	234 aa		11.64	□□□□□ -0.55
INO80-204	ENST00000558270	WDR35	Q9P2L0	1181 aa		11.64	□□□□□ -0.55
INO80-204	ENST00000558270	CLCA2	Q9UQC9	943 aa		11.64	□□□□□ -0.55
INO80-204	ENST00000558270	UBR5	O95071	2799 aa	Predicted RBP	11.64	□□□□□ -0.55
INO80-204	ENST00000558270	KNL1	Q8NG31	2342 aa		11.64	□□□□□ -0.55
INO80-204	ENST00000558270	MYO9A	B2RTY4	2548 aa		11.63	□□□□□ -0.55
INO80-204	ENST00000558270		A0A1B0GTQ1	180 aa		11.63	□□□□□ -0.55
INO80-204	ENST00000558270	SLC16A3	O15427	465 aa	Known RBP	11.63	□□□□□ -0.55
INO80-204	ENST00000558270	KLK10	O43240	276 aa		11.63	□□□□□ -0.55
INO80-204	ENST00000558270	PAPSS1	O43252	624 aa	Predicted RBP	11.63	□□□□□ -0.55
INO80-204	ENST00000558270	CACNG3	O60359	315 aa		11.63	□□□□□ -0.55
INO80-204	ENST00000558270	GREM1	O60565	184 aa		11.63	□□□□□ -0.55
INO80-204	ENST00000558270	CLSTN1	O94985	981 aa		11.63	□□□□□ -0.55
INO80-204	ENST00000558270	ACADVL	P49748	655 aa		11.63	□□□□□ -0.55
INO80-204	ENST00000558270	FKBP3	Q00688	224 aa	Known RBP	11.63	□□□□□ -0.55
INO80-204	ENST00000558270	LRRC63	Q05C16	580 aa		11.63	□□□□□ -0.55
INO80-204	ENST00000558270	VAC14	Q08AM6	782 aa		11.63	□□□□□ -0.55
INO80-204	ENST00000558270	ILK	Q13418	452 aa		11.63	□□□□□ -0.55
INO80-204	ENST00000558270	ZNF394	Q53GI3	561 aa		11.63	□□□□□ -0.55
INO80-204	ENST00000558270	C6orf132	Q5T0Z8	1188 aa		11.63	□□□□□ -0.55
INO80-204	ENST00000558270	HECTD3	Q5T447	861 aa		11.63	□□□□□ -0.55
INO80-204	ENST00000558270	ZNF574	Q6ZN55	896 aa	Predicted RBP	11.63	□□□□□ -0.55
INO80-204	ENST00000558270	TPGS1	Q6ZTW0	290 aa		11.63	□□□□□ -0.55
INO80-204	ENST00000558270	DHX40	Q8IX18	779 aa	Known RBP	11.63	□□□□□ -0.55
INO80-204	ENST00000558270	KCNE4	Q8WWG9	221 aa		11.63	□□□□□ -0.55
INO80-204	ENST00000558270	ZNF578	Q96N58	590 aa	Predicted RBP	11.63	□□□□□ -0.55
INO80-204	ENST00000558270	MED15	Q96RN5	788 aa		11.63	□□□□□ -0.55
INO80-204	ENST00000558270	NT5C1A	Q9BXI3	368 aa		11.63	□□□□□ -0.55
INO80-204	ENST00000558270	COMMD8	Q9NX08	183 aa		11.63	□□□□□ -0.55
INO80-204	ENST00000558270	SLCO1B1	Q9Y6L6	691 aa		11.63	□□□□□ -0.55
INO80-204	ENST00000558270	ATP8B3	O60423	1300 aa		11.62	□□□□□ -0.55
INO80-204	ENST00000558270	BIN1	O00499	593 aa		11.62	□□□□□ -0.55
INO80-204	ENST00000558270	NPC1	O15118	1278 aa		11.62	□□□□□ -0.55
INO80-204	ENST00000558270	CYP26A1	O43174	497 aa		11.62	□□□□□ -0.55
INO80-204	ENST00000558270	TBX18	O95935	607 aa		11.62	□□□□□ -0.55
INO80-204	ENST00000558270	IGLV3-19	P01714	112 aa		11.62	□□□□□ -0.55
INO80-204	ENST00000558270	CTSK	P43235	329 aa		11.62	□□□□□ -0.55
INO80-204	ENST00000558270	NFATC3	Q12968	1075 aa		11.62	□□□□□ -0.55
INO80-204	ENST00000558270	DCAF17	Q5H9S7	520 aa	Predicted RBP	11.62	□□□□□ -0.55
INO80-204	ENST00000558270	SCD5	Q86SK9	330 aa		11.62	□□□□□ -0.55
INO80-204	ENST00000558270	EID2	Q8N6I1	236 aa		11.62	□□□□□ -0.55
INO80-204	ENST00000558270	LMO3	Q8TAP4	145 aa		11.62	□□□□□ -0.55
INO80-204	ENST00000558270	UCMA	Q8WVF2	138 aa		11.62	□□□□□ -0.55
INO80-204	ENST00000558270	SKA1	Q96BD8	255 aa		11.62	□□□□□ -0.55
INO80-204	ENST00000558270	P2RY11	Q96G91	374 aa		11.62	□□□□□ -0.55
INO80-204	ENST00000558270	DHTKD1	Q96HY7	919 aa	Predicted RBP	11.62	□□□□□ -0.55
INO80-204	ENST00000558270	FAXDC2	Q96IV6	333 aa		11.62	□□□□□ -0.55
INO80-204	ENST00000558270	TSG101	Q99816	390 aa		11.62	□□□□□ -0.55
INO80-204	ENST00000558270	ACE2	Q9BYF1	805 aa	Predicted RBP	11.62	□□□□□ -0.55
INO80-204	ENST00000558270	IMPG2	Q9BZV3	1241 aa		11.62	□□□□□ -0.55
INO80-204	ENST00000558270	C6orf106	Q9H6K1	298 aa	Predicted RBP	11.62	□□□□□ -0.55
INO80-204	ENST00000558270	CISH	Q9NSE2	258 aa		11.62	□□□□□ -0.55
INO80-204	ENST00000558270	ANKMY1	Q9P2S6	941 aa		11.62	□□□□□ -0.55
INO80-204	ENST00000558270	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	11.62	□□□□□ -0.55
INO80-204	ENST00000558270	TULP2	O00295	520 aa		11.61	□□□□□ -0.55
INO80-204	ENST00000558270	FSBP	O95073	299 aa		11.61	□□□□□ -0.55
INO80-204	ENST00000558270	FAM200B	P0CF97	657 aa		11.61	□□□□□ -0.55
INO80-204	ENST00000558270	CD27	P26842	260 aa		11.61	□□□□□ -0.55
INO80-204	ENST00000558270	TUB	P50607	506 aa		11.61	□□□□□ -0.55
INO80-204	ENST00000558270	KIF11	P52732	1056 aa		11.61	□□□□□ -0.55
INO80-204	ENST00000558270	E2F5	Q15329	346 aa		11.61	□□□□□ -0.55
INO80-204	ENST00000558270	KCNT1	Q5JUK3	1230 aa		11.61	□□□□□ -0.55
INO80-204	ENST00000558270	TCERG1L	Q5VWI1	586 aa		11.61	□□□□□ -0.55
INO80-204	ENST00000558270	KLHL10	Q6JEL2	608 aa		11.61	□□□□□ -0.55
INO80-204	ENST00000558270	LSMEM2	Q8N112	164 aa		11.61	□□□□□ -0.55
INO80-204	ENST00000558270	CACTIN-AS1	Q8N1I8	211 aa		11.61	□□□□□ -0.55
INO80-204	ENST00000558270	NELFB	Q8WX92	580 aa		11.61	□□□□□ -0.55
INO80-204	ENST00000558270	KAT5	Q92993	513 aa		11.61	□□□□□ -0.55
INO80-204	ENST00000558270	BHMT	Q93088	406 aa		11.61	□□□□□ -0.55
INO80-204	ENST00000558270	JAKMIP2	Q96AA8	810 aa		11.61	□□□□□ -0.55
INO80-204	ENST00000558270	CCDC34	Q96HJ3	373 aa		11.61	□□□□□ -0.55
INO80-204	ENST00000558270	ELF4	Q99607	663 aa	Predicted RBP	11.61	□□□□□ -0.55
INO80-204	ENST00000558270	KLF16	Q9BXK1	252 aa	Predicted RBP	11.61	□□□□□ -0.55
INO80-204	ENST00000558270	DUSP16	Q9BY84	665 aa		11.61	□□□□□ -0.55
INO80-204	ENST00000558270	LSM7	Q9UK45	103 aa	Known RBP	11.61	□□□□□ -0.55
INO80-204	ENST00000558270	CTNND2	Q9UQB3	1225 aa		11.61	□□□□□ -0.55
INO80-204	ENST00000558270	SCML2	Q9UQR0	700 aa		11.61	□□□□□ -0.55
INO80-204	ENST00000558270	USP3	Q9Y6I4	520 aa		11.61	□□□□□ -0.55
INO80-204	ENST00000558270		A0A1W2PQH9	124 aa		11.6	□□□□□ -0.55
INO80-204	ENST00000558270	RNF225	M0QZC1	329 aa	Predicted RBP	11.6	□□□□□ -0.55
INO80-204	ENST00000558270	MDM4	O15151	490 aa		11.6	□□□□□ -0.55
INO80-204	ENST00000558270	YKT6	O15498	198 aa		11.6	□□□□□ -0.55
INO80-204	ENST00000558270	TLR5	O60602	858 aa		11.6	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms