RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 STN1Q9H668 368 aaKnown RBP8.57□□□□□ -1.04
SPG11-209ENST00000558253 MLXIPLQ9NP71 852 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 ARHGEF4Q9NR80 690 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 KCNK4Q9NYG8 393 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 DCDC2Q9UHG0 476 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 FBXW11Q9UKB1 542 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 ADAM28Q9UKQ2 775 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 GRID1Q9ULK0 1009 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 SORCS3Q9UPU3 1222 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 PLLPQ9Y342 182 aa8.57□□□□□ -1.04
SPG11-209ENST00000558253 M0QYT0 321 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 EEF2KO00418 725 aaKnown RBP8.56□□□□□ -1.04
SPG11-209ENST00000558253 PIK3R2O00459 728 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 CAPN9O14815 690 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 TREHO43280 583 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 CCDC22O60826 627 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 POLBP06746 335 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 ADRA1DP25100 572 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 DNAJB1P25685 340 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 SERPINB4P48594 390 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 POLD2P49005 469 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 NPY2RP49146 381 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 CDK7P50613 346 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 PURAQ00577 322 aaKnown RBP8.56□□□□□ -1.04
SPG11-209ENST00000558253 PPARDQ03181 441 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 GBE1Q04446 702 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 TMEM62Q0P6H9 643 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 ADIGQ0VDE8 80 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 IFRD2Q12894 506 aaPredicted RBP8.56□□□□□ -1.04
SPG11-209ENST00000558253 DPYSQ14117 519 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 GPR162Q16538 588 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 CA9Q16790 459 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 PREPLQ4J6C6 727 aaPredicted RBP8.56□□□□□ -1.04
SPG11-209ENST00000558253 DCAF6Q58WW2 860 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 GLRA4Q5JXX5 417 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 WASHC2DQ5SRD0 308 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 ACBD5Q5T8D3 534 aaPredicted RBP8.56□□□□□ -1.04
SPG11-209ENST00000558253 DESI1Q6ICB0 168 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 C17orf99Q6UX52 265 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 TBC1D1Q86TI0 1168 aaPredicted RBP8.56□□□□□ -1.04
SPG11-209ENST00000558253 LRRC49Q8IUZ0 686 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 IGDCC3Q8IVU1 814 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 ARHGAP24Q8N264 748 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 COLGALT1Q8NBJ5 622 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 GIMAP7Q8NHV1 300 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 CCDC110Q8TBZ0 833 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 FAM149B1Q96BN6 582 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 SMARCD1Q96GM5 515 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 SRPK1Q96SB4 655 aaKnown RBP8.56□□□□□ -1.04
SPG11-209ENST00000558253 ACBD6Q9BR61 282 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 APOL6Q9BWW8 343 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 B3GNT5Q9BYG0 378 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 UPF3AQ9H1J1 476 aaKnown RBP8.56□□□□□ -1.04
SPG11-209ENST00000558253 TLE6Q9H808 572 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 C10orf88Q9H8K7 445 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 KIF9Q9HAQ2 790 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 ZFYVE28Q9HCC9 887 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 CSNK1G1Q9HCP0 422 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 GPATCH2LQ9NWQ4 482 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 NSMCE4AQ9NXX6 385 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 FNIP2Q9P278 1114 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 ZFP69BQ9UJL9 534 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 HES2Q9Y543 173 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 NME7Q9Y5B8 376 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 MAD1L1Q9Y6D9 718 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 SQORQ9Y6N5 450 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 EVPLQ92817 2033 aa8.56□□□□□ -1.04
SPG11-209ENST00000558253 FOXO6A8MYZ6 492 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 TRIM49D1C9J1S8 452 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 RNF103O00237 685 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 IGF2BP3O00425 579 aaKnown RBP eCLIP8.55□□□□□ -1.04
SPG11-209ENST00000558253 PTGESO14684 152 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 LILRB3O75022 631 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 GLRA3O75311 464 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 BANF1O75531 89 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 RFPL1O75677 317 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 METTL18O95568 372 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 C1QAP02745 245 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 CYP11A1P05108 521 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 ODC1P11926 461 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 GOT1P17174 413 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 JUNDP17535 347 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 AMPD1P23109 780 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 GRK2P25098 689 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 PTPN4P29074 926 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 TKTL1P51854 596 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 ARFIP2P53365 341 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 DAOAP59103 153 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 GAD2Q05329 585 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 MGAT5Q09328 741 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 SLC10A2Q12908 348 aaPredicted RBP8.55□□□□□ -1.04
SPG11-209ENST00000558253 PRPSAP1Q14558 356 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 SPRED3Q2MJR0 410 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 NBPF20Q3BBV1 942 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 GRTP1Q5TC63 336 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 MFSD14CQ5VZR4 134 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 DSTYKQ6XUX3 929 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 CLEC20AQ6ZU45 233 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 RFX8Q6ZV50 586 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 FAM47EQ6ZV65 393 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms