RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 TTC39BQ5VTQ0 682 aaPredicted RBP9.29□□□□□ -0.92
SPG11-207ENST00000558138 RNF219Q5W0B1 726 aaPredicted RBP9.29□□□□□ -0.92
SPG11-207ENST00000558138 EGFLAMQ63HQ2 1017 aa9.29□□□□□ -0.92
SPG11-207ENST00000558138 E4F1Q66K89 784 aaPredicted RBP9.29□□□□□ -0.92
SPG11-207ENST00000558138 ANO7Q6IWH7 933 aa9.29□□□□□ -0.92
SPG11-207ENST00000558138 MON1BQ7L1V2 547 aa9.29□□□□□ -0.92
SPG11-207ENST00000558138 SYT13Q7L8C5 426 aa9.29□□□□□ -0.92
SPG11-207ENST00000558138 CIR1Q86X95 450 aaPredicted RBP9.29□□□□□ -0.92
SPG11-207ENST00000558138 FAM131BQ86XD5 332 aa9.29□□□□□ -0.92
SPG11-207ENST00000558138 VSTM4Q8IW00 320 aa9.29□□□□□ -0.92
SPG11-207ENST00000558138 DRC7Q8IY82 874 aa9.29□□□□□ -0.92
SPG11-207ENST00000558138 MCOLN2Q8IZK6 566 aa9.29□□□□□ -0.92
SPG11-207ENST00000558138 AHI1Q8N157 1196 aa9.29□□□□□ -0.92
SPG11-207ENST00000558138 JOSD2Q8TAC2 188 aa9.29□□□□□ -0.92
SPG11-207ENST00000558138 WFIKKN2Q8TEU8 576 aa9.29□□□□□ -0.92
SPG11-207ENST00000558138 FAM172AQ8WUF8 416 aa9.29□□□□□ -0.92
SPG11-207ENST00000558138 SYN2Q92777 582 aaPredicted RBP9.29□□□□□ -0.92
SPG11-207ENST00000558138 EZH1Q92800 747 aaPredicted RBP9.29□□□□□ -0.92
SPG11-207ENST00000558138 PRICKLE1Q96MT3 831 aaPredicted RBP9.29□□□□□ -0.92
SPG11-207ENST00000558138 FAM126AQ9BYI3 521 aaPredicted RBP9.29□□□□□ -0.92
SPG11-207ENST00000558138 PARVAQ9NVD7 372 aa9.29□□□□□ -0.92
SPG11-207ENST00000558138 POLR3BQ9NW08 1133 aaPredicted RBP9.29□□□□□ -0.92
SPG11-207ENST00000558138 CNOT8Q9UFF9 292 aaKnown RBP9.29□□□□□ -0.92
SPG11-207ENST00000558138 GGA2Q9UJY4 613 aa9.29□□□□□ -0.92
SPG11-207ENST00000558138 STOML2Q9UJZ1 356 aa9.29□□□□□ -0.92
SPG11-207ENST00000558138 TMEM59LQ9UK28 342 aa9.29□□□□□ -0.92
SPG11-207ENST00000558138 VANGL2Q9ULK5 521 aa9.29□□□□□ -0.92
SPG11-207ENST00000558138 MMP17Q9ULZ9 603 aa9.29□□□□□ -0.92
SPG11-207ENST00000558138 PLA2G4CQ9UP65 541 aa9.29□□□□□ -0.92
SPG11-207ENST00000558138 ARIH1Q9Y4X5 557 aaPredicted RBP9.29□□□□□ -0.92
SPG11-207ENST00000558138 PCDHGA2Q9Y5H1 932 aa9.29□□□□□ -0.92
SPG11-207ENST00000558138 SCINQ9Y6U3 715 aa9.29□□□□□ -0.92
SPG11-207ENST00000558138 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.28□□□□□ -0.92
SPG11-207ENST00000558138 PRRT4C9JH25 899 aa9.28□□□□□ -0.92
SPG11-207ENST00000558138 AKR1B15C9JRZ8 316 aaPredicted RBP9.28□□□□□ -0.92
SPG11-207ENST00000558138 DDX3XO00571 662 aaKnown RBP eCLIP9.28□□□□□ -0.92
SPG11-207ENST00000558138 AXIN1O15169 862 aa9.28□□□□□ -0.92
SPG11-207ENST00000558138 AKR1B10O60218 316 aa9.28□□□□□ -0.92
SPG11-207ENST00000558138 RTN2O75298 545 aa9.28□□□□□ -0.92
SPG11-207ENST00000558138 LUC7L3O95232 432 aaKnown RBP9.28□□□□□ -0.92
SPG11-207ENST00000558138 ADCY5O95622 1261 aa9.28□□□□□ -0.92
SPG11-207ENST00000558138 ATP5BP06576 529 aaKnown RBP9.28□□□□□ -0.92
SPG11-207ENST00000558138 CISD3P0C7P0 127 aa9.28□□□□□ -0.92
SPG11-207ENST00000558138 NTSR1P30989 418 aa9.28□□□□□ -0.92
SPG11-207ENST00000558138 PLA2G5P39877 138 aa9.28□□□□□ -0.92
SPG11-207ENST00000558138 NUMBP49757 651 aa9.28□□□□□ -0.92
SPG11-207ENST00000558138 ADKP55263 362 aaKnown RBP9.28□□□□□ -0.92
SPG11-207ENST00000558138 ZNF177Q13360 481 aaPredicted RBP9.28□□□□□ -0.92
SPG11-207ENST00000558138 EIF4HQ15056 248 aaKnown RBP9.28□□□□□ -0.92
SPG11-207ENST00000558138 CCDC14Q49A88 953 aa9.28□□□□□ -0.92
SPG11-207ENST00000558138 CCDC122Q5T0U0 273 aa9.28□□□□□ -0.92
SPG11-207ENST00000558138 MPP7Q5T2T1 576 aa9.28□□□□□ -0.92
SPG11-207ENST00000558138 MBLAC2Q68D91 279 aa9.28□□□□□ -0.92
SPG11-207ENST00000558138 RWDD4Q6NW29 188 aaKnown RBP9.28□□□□□ -0.92
SPG11-207ENST00000558138 SERPINA13PQ6UXR4 307 aa9.28□□□□□ -0.92
SPG11-207ENST00000558138 LONP2Q86WA8 852 aa9.28□□□□□ -0.92
SPG11-207ENST00000558138 ZNF354CQ86Y25 554 aa9.28□□□□□ -0.92
SPG11-207ENST00000558138 DNAAF5Q86Y56 855 aa9.28□□□□□ -0.92
SPG11-207ENST00000558138 CNGA4Q8IV77 575 aa9.28□□□□□ -0.92
SPG11-207ENST00000558138 CAMKK1Q8N5S9 505 aa9.28□□□□□ -0.92
SPG11-207ENST00000558138 IL17RCQ8NAC3 791 aa9.28□□□□□ -0.92
SPG11-207ENST00000558138 OR8K1Q8NGG5 319 aa9.28□□□□□ -0.92
SPG11-207ENST00000558138 KCNV2Q8TDN2 545 aa9.28□□□□□ -0.92
SPG11-207ENST00000558138 CYB5D2Q8WUJ1 264 aa9.28□□□□□ -0.92
SPG11-207ENST00000558138 HMGB4Q8WW32 186 aa9.28□□□□□ -0.92
SPG11-207ENST00000558138 SORCS1Q8WY21 1168 aa9.28□□□□□ -0.92
SPG11-207ENST00000558138 NKD2Q969F2 451 aaPredicted RBP9.28□□□□□ -0.92
SPG11-207ENST00000558138 VCPIP1Q96JH7 1222 aa9.28□□□□□ -0.92
SPG11-207ENST00000558138 PPP1R9BQ96SB3 815 aa9.28□□□□□ -0.92
SPG11-207ENST00000558138 IRX2Q9BZI1 471 aaPredicted RBP9.28□□□□□ -0.92
SPG11-207ENST00000558138 TPSD1Q9BZJ3 242 aa9.28□□□□□ -0.92
SPG11-207ENST00000558138 RBSNQ9H1K0 784 aa9.28□□□□□ -0.92
SPG11-207ENST00000558138 MRPL47Q9HD33 250 aaKnown RBP9.28□□□□□ -0.92
SPG11-207ENST00000558138 C2orf42Q9NWW7 574 aa9.28□□□□□ -0.92
SPG11-207ENST00000558138 CACNA2D2Q9NY47 1150 aa9.28□□□□□ -0.92
SPG11-207ENST00000558138 ADAMTS1Q9UHI8 967 aa9.28□□□□□ -0.92
SPG11-207ENST00000558138 CLEC4EQ9ULY5 219 aa9.28□□□□□ -0.92
SPG11-207ENST00000558138 SLC27A6Q9Y2P4 619 aa9.28□□□□□ -0.92
SPG11-207ENST00000558138 SNX10Q9Y5X0 201 aa9.28□□□□□ -0.92
SPG11-207ENST00000558138 HS3ST4Q9Y661 456 aa9.28□□□□□ -0.92
SPG11-207ENST00000558138 A0A1B0GVM2 712 aa9.27□□□□□ -0.93
SPG11-207ENST00000558138 ANTXRLA6NF34 631 aa9.27□□□□□ -0.93
SPG11-207ENST00000558138 TCAF2A6NFQ2 919 aa9.27□□□□□ -0.93
SPG11-207ENST00000558138 SIGLEC16A6NMB1 481 aa9.27□□□□□ -0.93
SPG11-207ENST00000558138 K7ESF4 209 aa9.27□□□□□ -0.93
SPG11-207ENST00000558138 SGK1O00141 431 aa9.27□□□□□ -0.93
SPG11-207ENST00000558138 CCP110O43303 1012 aa9.27□□□□□ -0.93
SPG11-207ENST00000558138 TIMM44O43615 452 aa9.27□□□□□ -0.93
SPG11-207ENST00000558138 MFAP3LO75121 409 aa9.27□□□□□ -0.93
SPG11-207ENST00000558138 RNF8O76064 485 aa9.27□□□□□ -0.93
SPG11-207ENST00000558138 EPHX1P07099 455 aa9.27□□□□□ -0.93
SPG11-207ENST00000558138 PLEKP08567 350 aaPredicted RBP9.27□□□□□ -0.93
SPG11-207ENST00000558138 MYBL1P10243 752 aa9.27□□□□□ -0.93
SPG11-207ENST00000558138 GZMAP12544 262 aa9.27□□□□□ -0.93
SPG11-207ENST00000558138 HLA-FP30511 346 aa9.27□□□□□ -0.93
SPG11-207ENST00000558138 CD70P32970 193 aa9.27□□□□□ -0.93
SPG11-207ENST00000558138 RFC1P35251 1148 aaPredicted RBP9.27□□□□□ -0.93
SPG11-207ENST00000558138 EIF4A3P38919 411 aaKnown RBP9.27□□□□□ -0.93
SPG11-207ENST00000558138 NNMTP40261 264 aa9.27□□□□□ -0.93
SPG11-207ENST00000558138 SSR1P43307 286 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms