RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 ITFG1Q8TB96 612 aa17.41■□□□□ 0.38
SNX1-203ENST00000558040 KIF9Q9HAQ2 790 aa17.41■□□□□ 0.38
SNX1-203ENST00000558040 TDP1Q9NUW8 608 aa17.41■□□□□ 0.38
SNX1-203ENST00000558040 CFAP97Q9P2B7 532 aa17.41■□□□□ 0.38
SNX1-203ENST00000558040 PPARGC1AQ9UBK2 798 aaKnown RBP17.41■□□□□ 0.38
SNX1-203ENST00000558040 AGO1Q9UL18 857 aaKnown RBP17.41■□□□□ 0.38
SNX1-203ENST00000558040 NOTCH4Q99466 2003 aa17.4■□□□□ 0.38
SNX1-203ENST00000558040 LEFTY2O00292 366 aa17.4■□□□□ 0.38
SNX1-203ENST00000558040 PHF2O75151 1096 aa17.4■□□□□ 0.38
SNX1-203ENST00000558040 KLKB1P03952 638 aa17.4■□□□□ 0.38
SNX1-203ENST00000558040 TCF3P15923 654 aa17.4■□□□□ 0.38
SNX1-203ENST00000558040 TACR2P21452 398 aa17.4■□□□□ 0.38
SNX1-203ENST00000558040 AMPD1P23109 780 aa17.4■□□□□ 0.38
SNX1-203ENST00000558040 SERPINB6P35237 376 aa17.4■□□□□ 0.38
SNX1-203ENST00000558040 GGCXP38435 758 aa17.4■□□□□ 0.38
SNX1-203ENST00000558040 MTHFRP42898 656 aa17.4■□□□□ 0.38
SNX1-203ENST00000558040 C2orf54Q08AI8 447 aa17.4■□□□□ 0.38
SNX1-203ENST00000558040 SIX1Q15475 284 aaPredicted RBP17.4■□□□□ 0.38
SNX1-203ENST00000558040 RABGAP1LQ5R372 815 aa17.4■□□□□ 0.38
SNX1-203ENST00000558040 ADGRF1Q5T601 910 aa17.4■□□□□ 0.38
SNX1-203ENST00000558040 NADSYN1Q6IA69 706 aa17.4■□□□□ 0.38
SNX1-203ENST00000558040 TMCO3Q6UWJ1 677 aa17.4■□□□□ 0.38
SNX1-203ENST00000558040 Q6ZNB5 142 aa17.4■□□□□ 0.38
SNX1-203ENST00000558040 HTR3DQ70Z44 454 aa17.4■□□□□ 0.38
SNX1-203ENST00000558040 GET4Q7L5D6 327 aaPredicted RBP17.4■□□□□ 0.38
SNX1-203ENST00000558040 PQLC3Q8N755 202 aa17.4■□□□□ 0.38
SNX1-203ENST00000558040 ADAMTS19Q8TE59 1207 aa17.4■□□□□ 0.38
SNX1-203ENST00000558040 SH3RF2Q8TEC5 729 aa17.4■□□□□ 0.38
SNX1-203ENST00000558040 P3H4Q92791 437 aa17.4■□□□□ 0.38
SNX1-203ENST00000558040 USP13Q92995 863 aaPredicted RBP17.4■□□□□ 0.38
SNX1-203ENST00000558040 RUNDC3BQ96NL0 473 aa17.4■□□□□ 0.38
SNX1-203ENST00000558040 PRMT1Q99873 361 aaKnown RBP17.4■□□□□ 0.38
SNX1-203ENST00000558040 S1PR5Q9H228 398 aa17.4■□□□□ 0.38
SNX1-203ENST00000558040 RBM12Q9NTZ6 932 aaKnown RBP17.4■□□□□ 0.38
SNX1-203ENST00000558040 GDE1Q9NZC3 331 aa17.4■□□□□ 0.38
SNX1-203ENST00000558040 STOML2Q9UJZ1 356 aa17.4■□□□□ 0.38
SNX1-203ENST00000558040 VANGL2Q9ULK5 521 aa17.4■□□□□ 0.38
SNX1-203ENST00000558040 C2orf16Q68DN1 1984 aa17.4■□□□□ 0.38
SNX1-203ENST00000558040 LAMA2P24043 3122 aaKnown RBP17.4■□□□□ 0.38
SNX1-203ENST00000558040 HELZP42694 1942 aaKnown RBP17.39■□□□□ 0.37
SNX1-203ENST00000558040 IGLV3-10A0A075B6K4 115 aa17.39■□□□□ 0.37
SNX1-203ENST00000558040 E2F8A0AVK6 867 aa17.39■□□□□ 0.37
SNX1-203ENST00000558040 ERCC2P18074 760 aa17.39■□□□□ 0.37
SNX1-203ENST00000558040 CHRNA3P32297 505 aa17.39■□□□□ 0.37
SNX1-203ENST00000558040 NR2C2P49116 596 aa17.39■□□□□ 0.37
SNX1-203ENST00000558040 ADCY2Q08462 1091 aa17.39■□□□□ 0.37
SNX1-203ENST00000558040 CCNG2Q16589 344 aa17.39■□□□□ 0.37
SNX1-203ENST00000558040 CYP1B1Q16678 543 aa17.39■□□□□ 0.37
SNX1-203ENST00000558040 FAM133BQ5BKY9 247 aaKnown RBP17.39■□□□□ 0.37
SNX1-203ENST00000558040 CCDC70Q6NSX1 233 aa17.39■□□□□ 0.37
SNX1-203ENST00000558040 FBXL22Q6P050 247 aa17.39■□□□□ 0.37
SNX1-203ENST00000558040 BZW1Q7L1Q6 419 aaKnown RBP17.39■□□□□ 0.37
SNX1-203ENST00000558040 NPAS3Q8IXF0 933 aa17.39■□□□□ 0.37
SNX1-203ENST00000558040 LGI2Q8N0V4 545 aa17.39■□□□□ 0.37
SNX1-203ENST00000558040 PLD5Q8N7P1 536 aa17.39■□□□□ 0.37
SNX1-203ENST00000558040 PRELID2Q8N945 189 aa17.39■□□□□ 0.37
SNX1-203ENST00000558040 C12orf50Q8NA57 414 aaPredicted RBP17.39■□□□□ 0.37
SNX1-203ENST00000558040 TTC16Q8NEE8 873 aa17.39■□□□□ 0.37
SNX1-203ENST00000558040 ZSCAN18Q8TBC5 510 aaPredicted RBP17.39■□□□□ 0.37
SNX1-203ENST00000558040 MAGOHBQ96A72 148 aaKnown RBP17.39■□□□□ 0.37
SNX1-203ENST00000558040 RPRD1AQ96P16 312 aaPredicted RBP17.39■□□□□ 0.37
SNX1-203ENST00000558040 ZYG11BQ9C0D3 744 aa17.39■□□□□ 0.37
SNX1-203ENST00000558040 SMG9Q9H0W8 520 aaKnown RBP17.39■□□□□ 0.37
SNX1-203ENST00000558040 RETREG1Q9H6L5 497 aa17.39■□□□□ 0.37
SNX1-203ENST00000558040 RAD54BQ9Y620 910 aa17.39■□□□□ 0.37
SNX1-203ENST00000558040 TYW5A2RUC4 315 aaKnown RBP17.38■□□□□ 0.37
SNX1-203ENST00000558040 EFCAB8A8MWE9 144 aa17.38■□□□□ 0.37
SNX1-203ENST00000558040 MCF2LO15068 1137 aa17.38■□□□□ 0.37
SNX1-203ENST00000558040 DCLK1O15075 740 aa17.38■□□□□ 0.37
SNX1-203ENST00000558040 RHOQP17081 205 aa17.38■□□□□ 0.37
SNX1-203ENST00000558040 CHKAP35790 457 aa17.38■□□□□ 0.37
SNX1-203ENST00000558040 FNTAP49354 379 aa17.38■□□□□ 0.37
SNX1-203ENST00000558040 ZXDBP98169 803 aa17.38■□□□□ 0.37
SNX1-203ENST00000558040 OTUD4Q01804 1114 aaKnown RBP17.38■□□□□ 0.37
SNX1-203ENST00000558040 DLX2Q07687 328 aaPredicted RBP17.38■□□□□ 0.37
SNX1-203ENST00000558040 USP4Q13107 963 aa17.38■□□□□ 0.37
SNX1-203ENST00000558040 CBX2Q14781 532 aaPredicted RBP17.38■□□□□ 0.37
SNX1-203ENST00000558040 PAFAH1B3Q15102 231 aaKnown RBP17.38■□□□□ 0.37
SNX1-203ENST00000558040 TTC39BQ5VTQ0 682 aaPredicted RBP17.38■□□□□ 0.37
SNX1-203ENST00000558040 NCBP2-AS2Q69YL0 99 aa17.38■□□□□ 0.37
SNX1-203ENST00000558040 C1orf228Q6PIY5 440 aa17.38■□□□□ 0.37
SNX1-203ENST00000558040 C14orf80Q86SX3 495 aa17.38■□□□□ 0.37
SNX1-203ENST00000558040 ARID3BQ8IVW6 561 aaPredicted RBP17.38■□□□□ 0.37
SNX1-203ENST00000558040 KLHL7Q8IXQ5 586 aa17.38■□□□□ 0.37
SNX1-203ENST00000558040 ZNF683Q8IZ20 524 aa17.38■□□□□ 0.37
SNX1-203ENST00000558040 MMGT1Q8N4V1 131 aa17.38■□□□□ 0.37
SNX1-203ENST00000558040 LZTR1Q8N653 840 aa17.38■□□□□ 0.37
SNX1-203ENST00000558040 CELF5Q8N6W0 485 aaKnown RBP17.38■□□□□ 0.37
SNX1-203ENST00000558040 KIAA1958Q8N8K9 716 aa17.38■□□□□ 0.37
SNX1-203ENST00000558040 ACTL9Q8TC94 416 aa17.38■□□□□ 0.37
SNX1-203ENST00000558040 C1orf54Q8WWF1 131 aa17.38■□□□□ 0.37
SNX1-203ENST00000558040 FGF13Q92913 245 aa17.38■□□□□ 0.37
SNX1-203ENST00000558040 WBP2Q969T9 261 aa17.38■□□□□ 0.37
SNX1-203ENST00000558040 HAUS1Q96CS2 278 aa17.38■□□□□ 0.37
SNX1-203ENST00000558040 MSLNLQ96KJ4 702 aa17.38■□□□□ 0.37
SNX1-203ENST00000558040 ZSWIM3Q96MP5 696 aa17.38■□□□□ 0.37
SNX1-203ENST00000558040 NECTIN4Q96NY8 510 aa17.38■□□□□ 0.37
SNX1-203ENST00000558040 LRRC19Q9H756 370 aa17.38■□□□□ 0.37
SNX1-203ENST00000558040 CDH7Q9ULB5 785 aa17.38■□□□□ 0.37
SNX1-203ENST00000558040 NEU3Q9UQ49 428 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms