RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 DCNP07585 359 aaKnown RBP26.42■■□□□ 1.82
SMAD6-202ENST00000557916 CHRNB1P11230 501 aa26.42■■□□□ 1.82
SMAD6-202ENST00000557916 GGCXP38435 758 aa26.42■■□□□ 1.82
SMAD6-202ENST00000557916 RPS24P62847 133 aaKnown RBP26.42■■□□□ 1.82
SMAD6-202ENST00000557916 AUHQ13825 339 aaKnown RBP26.42■■□□□ 1.82
SMAD6-202ENST00000557916 PREPLQ4J6C6 727 aaPredicted RBP26.42■■□□□ 1.82
SMAD6-202ENST00000557916 ACBD5Q5T8D3 534 aaPredicted RBP26.42■■□□□ 1.82
SMAD6-202ENST00000557916 GRAMD4Q6IC98 578 aa26.42■■□□□ 1.82
SMAD6-202ENST00000557916 FBXL22Q6P050 247 aa26.42■■□□□ 1.82
SMAD6-202ENST00000557916 RAD9BQ6WBX8 426 aa26.42■■□□□ 1.82
SMAD6-202ENST00000557916 CFAP52Q8N1V2 620 aa26.42■■□□□ 1.82
SMAD6-202ENST00000557916 CCDC185Q8N715 623 aa26.42■■□□□ 1.82
SMAD6-202ENST00000557916 ZNF564Q8TBZ8 553 aaPredicted RBP26.42■■□□□ 1.82
SMAD6-202ENST00000557916 LRFN3Q9BTN0 628 aa26.42■■□□□ 1.82
SMAD6-202ENST00000557916 STIM2Q9P246 746 aa26.42■■□□□ 1.82
SMAD6-202ENST00000557916 FBXO10Q9UK96 956 aa26.42■■□□□ 1.82
SMAD6-202ENST00000557916 INTUQ9ULD6 942 aa26.42■■□□□ 1.82
SMAD6-202ENST00000557916 RNF8O76064 485 aa26.41■■□□□ 1.82
SMAD6-202ENST00000557916 KAT7O95251 611 aa26.41■■□□□ 1.82
SMAD6-202ENST00000557916 EGFP01133 1207 aa26.41■■□□□ 1.82
SMAD6-202ENST00000557916 APODP05090 189 aa26.41■■□□□ 1.82
SMAD6-202ENST00000557916 GRIA2P42262 883 aa26.41■■□□□ 1.82
SMAD6-202ENST00000557916 DGKGP49619 791 aa26.41■■□□□ 1.82
SMAD6-202ENST00000557916 MESP2Q0VG99 397 aa26.41■■□□□ 1.82
SMAD6-202ENST00000557916 CCINQ13939 588 aa26.41■■□□□ 1.82
SMAD6-202ENST00000557916 LRRC32Q14392 662 aa26.41■■□□□ 1.82
SMAD6-202ENST00000557916 DGKKQ5KSL6 1271 aa26.41■■□□□ 1.82
SMAD6-202ENST00000557916 RABGAP1LQ5R372 815 aa26.41■■□□□ 1.82
SMAD6-202ENST00000557916 C14orf80Q86SX3 495 aa26.41■■□□□ 1.82
SMAD6-202ENST00000557916 PHTF2Q8N3S3 785 aa26.41■■□□□ 1.82
SMAD6-202ENST00000557916 NTAN1Q96AB6 310 aa26.41■■□□□ 1.82
SMAD6-202ENST00000557916 BTBD6Q96KE9 485 aa26.41■■□□□ 1.82
SMAD6-202ENST00000557916 C1orf74Q96LT6 269 aa26.41■■□□□ 1.82
SMAD6-202ENST00000557916 SLC2A11Q9BYW1 496 aa26.41■■□□□ 1.82
SMAD6-202ENST00000557916 RBM12Q9NTZ6 932 aaKnown RBP26.41■■□□□ 1.82
SMAD6-202ENST00000557916 IP6K2Q9UHH9 426 aa26.41■■□□□ 1.82
SMAD6-202ENST00000557916 VANGL2Q9ULK5 521 aa26.41■■□□□ 1.82
SMAD6-202ENST00000557916 CLEC4EQ9ULY5 219 aa26.41■■□□□ 1.82
SMAD6-202ENST00000557916 PCDHA13Q9Y5I0 950 aa26.41■■□□□ 1.82
SMAD6-202ENST00000557916 SNX10Q9Y5X0 201 aa26.41■■□□□ 1.82
SMAD6-202ENST00000557916 CISD3P0C7P0 127 aa26.4■■□□□ 1.82
SMAD6-202ENST00000557916 SLFN11Q7Z7L1 901 aa26.4■■□□□ 1.82
SMAD6-202ENST00000557916 TMEM105Q8N8V8 129 aa26.4■■□□□ 1.82
SMAD6-202ENST00000557916 CLDN23Q96B33 292 aa26.4■■□□□ 1.82
SMAD6-202ENST00000557916 RPRD1AQ96P16 312 aaPredicted RBP26.4■■□□□ 1.82
SMAD6-202ENST00000557916 LUC7LQ9NQ29 371 aaKnown RBP26.4■■□□□ 1.82
SMAD6-202ENST00000557916 MYO1FO00160 1098 aa26.39■■□□□ 1.82
SMAD6-202ENST00000557916 IPO7O95373 1038 aaKnown RBP26.39■■□□□ 1.82
SMAD6-202ENST00000557916 PIGHQ14442 188 aaPredicted RBP26.39■■□□□ 1.82
SMAD6-202ENST00000557916 ACAP1Q15027 740 aa26.39■■□□□ 1.82
SMAD6-202ENST00000557916 RNF43Q68DV7 783 aa26.39■■□□□ 1.82
SMAD6-202ENST00000557916 LRRC31Q6UY01 552 aa26.39■■□□□ 1.82
SMAD6-202ENST00000557916 ARFGAP1Q8N6T3 406 aa26.39■■□□□ 1.82
SMAD6-202ENST00000557916 SLC35G2Q8TBE7 412 aa26.39■■□□□ 1.82
SMAD6-202ENST00000557916 EZH1Q92800 747 aaPredicted RBP26.39■■□□□ 1.82
SMAD6-202ENST00000557916 IGSF8Q969P0 613 aa26.39■■□□□ 1.82
SMAD6-202ENST00000557916 ZDBF2Q9HCK1 2354 aa26.39■■□□□ 1.82
SMAD6-202ENST00000557916 A0A0A0MRY4 1105 aa26.39■■□□□ 1.81
SMAD6-202ENST00000557916 TBC1D3BA6NDS4 549 aa26.39■■□□□ 1.81
SMAD6-202ENST00000557916 AVPR2P30518 371 aa26.39■■□□□ 1.81
SMAD6-202ENST00000557916 GSE1Q14687 1217 aa26.39■■□□□ 1.81
SMAD6-202ENST00000557916 TTC39BQ5VTQ0 682 aaPredicted RBP26.39■■□□□ 1.81
SMAD6-202ENST00000557916 NUDT18Q6ZVK8 323 aa26.39■■□□□ 1.81
SMAD6-202ENST00000557916 SYNPOQ8N3V7 929 aa26.39■■□□□ 1.81
SMAD6-202ENST00000557916 TERB1Q8NA31 727 aa26.39■■□□□ 1.81
SMAD6-202ENST00000557916 NCAPGQ9BPX3 1015 aa26.39■■□□□ 1.81
SMAD6-202ENST00000557916 OSBPL2Q9H1P3 480 aa26.39■■□□□ 1.81
SMAD6-202ENST00000557916 OSGEPQ9NPF4 335 aa26.39■■□□□ 1.81
SMAD6-202ENST00000557916 DLGAP2Q9P1A6 1054 aa26.39■■□□□ 1.81
SMAD6-202ENST00000557916 LRCH4O75427 683 aa26.38■■□□□ 1.81
SMAD6-202ENST00000557916 RPS9P46781 194 aaKnown RBP26.38■■□□□ 1.81
SMAD6-202ENST00000557916 AIF1P55008 147 aa26.38■■□□□ 1.81
SMAD6-202ENST00000557916 SCAPQ12770 1279 aa26.38■■□□□ 1.81
SMAD6-202ENST00000557916 FBXO43Q4G163 708 aa26.38■■□□□ 1.81
SMAD6-202ENST00000557916 MFN1Q8IWA4 741 aa26.38■■□□□ 1.81
SMAD6-202ENST00000557916 CCDC117Q8IWD4 279 aaPredicted RBP26.38■■□□□ 1.81
SMAD6-202ENST00000557916 RHOT2Q8IXI1 618 aa26.38■■□□□ 1.81
SMAD6-202ENST00000557916 CARNMT1Q8N4J0 409 aa26.38■■□□□ 1.81
SMAD6-202ENST00000557916 ANP32BQ92688 251 aaKnown RBP26.38■■□□□ 1.81
SMAD6-202ENST00000557916 OR12D3Q9UGF7 316 aa26.38■■□□□ 1.81
SMAD6-202ENST00000557916 PCSK1NQ9UHG2 260 aa26.38■■□□□ 1.81
SMAD6-202ENST00000557916 SLC27A6Q9Y2P4 619 aa26.38■■□□□ 1.81
SMAD6-202ENST00000557916 E9PAM4 449 aa26.37■■□□□ 1.81
SMAD6-202ENST00000557916 K7EQS6 105 aa26.37■■□□□ 1.81
SMAD6-202ENST00000557916 SRGAP2O75044 1071 aa26.37■■□□□ 1.81
SMAD6-202ENST00000557916 MIPP30301 263 aa26.37■■□□□ 1.81
SMAD6-202ENST00000557916 MAGEA9P43362 315 aa26.37■■□□□ 1.81
SMAD6-202ENST00000557916 C5orf22Q49AR2 442 aa26.37■■□□□ 1.81
SMAD6-202ENST00000557916 EFHC2Q5JST6 749 aa26.37■■□□□ 1.81
SMAD6-202ENST00000557916 CIR1Q86X95 450 aaPredicted RBP26.37■■□□□ 1.81
SMAD6-202ENST00000557916 SFTPA1Q8IWL2 248 aa26.37■■□□□ 1.81
SMAD6-202ENST00000557916 ZNF683Q8IZ20 524 aa26.37■■□□□ 1.81
SMAD6-202ENST00000557916 NIPA2Q8N8Q9 360 aa26.37■■□□□ 1.81
SMAD6-202ENST00000557916 ZNF557Q8N988 423 aaPredicted RBP26.37■■□□□ 1.81
SMAD6-202ENST00000557916 RFFLQ8WZ73 363 aa26.37■■□□□ 1.81
SMAD6-202ENST00000557916 MAGEB5Q9BZ81 275 aa26.37■■□□□ 1.81
SMAD6-202ENST00000557916 FZD10Q9ULW2 581 aa26.37■■□□□ 1.81
SMAD6-202ENST00000557916 MIA3Q5JRA6 1907 aa26.37■■□□□ 1.81
SMAD6-202ENST00000557916 H0Y626 953 aa26.36■■□□□ 1.81
SMAD6-202ENST00000557916 PRPSAP2O60256 369 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms