RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 MAGEC1O60732 1142 aa9.86□□□□□ -0.83
NEDD1-211ENST00000557454 DIAPH2O60879 1101 aa9.86□□□□□ -0.83
NEDD1-211ENST00000557454 VPS4BO75351 444 aa9.86□□□□□ -0.83
NEDD1-211ENST00000557454 TCEA3O75764 348 aa9.86□□□□□ -0.83
NEDD1-211ENST00000557454 PIAS2O75928 621 aa9.86□□□□□ -0.83
NEDD1-211ENST00000557454 NEBLO76041 1014 aa9.86□□□□□ -0.83
NEDD1-211ENST00000557454 KRT19P08727 400 aa9.86□□□□□ -0.83
NEDD1-211ENST00000557454 PRF1P14222 555 aa9.86□□□□□ -0.83
NEDD1-211ENST00000557454 UGT1A5P35504 534 aa9.86□□□□□ -0.83
NEDD1-211ENST00000557454 ZNF177Q13360 481 aaPredicted RBP9.86□□□□□ -0.83
NEDD1-211ENST00000557454 DRAP1Q14919 205 aaPredicted RBP9.86□□□□□ -0.83
NEDD1-211ENST00000557454 POM121L1PQ3SYA9 428 aa9.86□□□□□ -0.83
NEDD1-211ENST00000557454 ADALQ6DHV7 355 aa9.86□□□□□ -0.83
NEDD1-211ENST00000557454 IQCHQ86VS3 1027 aa9.86□□□□□ -0.83
NEDD1-211ENST00000557454 ZFAND4Q86XD8 727 aa9.86□□□□□ -0.83
NEDD1-211ENST00000557454 FBXO39Q8N4B4 442 aa9.86□□□□□ -0.83
NEDD1-211ENST00000557454 CSGALNACT2Q8N6G5 542 aa9.86□□□□□ -0.83
NEDD1-211ENST00000557454 SLC12A9Q9BXP2 914 aa9.86□□□□□ -0.83
NEDD1-211ENST00000557454 ELOVL4Q9GZR5 314 aa9.86□□□□□ -0.83
NEDD1-211ENST00000557454 RSPH9Q9H1X1 276 aaPredicted RBP9.86□□□□□ -0.83
NEDD1-211ENST00000557454 SYNDIG1Q9H7V2 258 aa9.86□□□□□ -0.83
NEDD1-211ENST00000557454 VPS4AQ9UN37 437 aa9.86□□□□□ -0.83
NEDD1-211ENST00000557454 NME7Q9Y5B8 376 aa9.86□□□□□ -0.83
NEDD1-211ENST00000557454 MYH10P35580 1976 aa9.85□□□□□ -0.83
NEDD1-211ENST00000557454 NPHP3-ACAD11A0A0J9YXS1 232 aa9.85□□□□□ -0.83
NEDD1-211ENST00000557454 ANKRD63C9JTQ0 380 aa9.85□□□□□ -0.83
NEDD1-211ENST00000557454 K7ENM7 598 aa9.85□□□□□ -0.83
NEDD1-211ENST00000557454 K7ESM1 405 aa9.85□□□□□ -0.83
NEDD1-211ENST00000557454 LATO43561 262 aa9.85□□□□□ -0.83
NEDD1-211ENST00000557454 TIMM44O43615 452 aa9.85□□□□□ -0.83
NEDD1-211ENST00000557454 IL18RAPO95256 599 aa9.85□□□□□ -0.83
NEDD1-211ENST00000557454 DDAH2O95865 285 aa9.85□□□□□ -0.83
NEDD1-211ENST00000557454 WARSP23381 471 aaKnown RBP9.85□□□□□ -0.83
NEDD1-211ENST00000557454 MAT2AP31153 395 aaKnown RBP9.85□□□□□ -0.83
NEDD1-211ENST00000557454 TRAPPC10P48553 1259 aa9.85□□□□□ -0.83
NEDD1-211ENST00000557454 HARS2P49590 506 aaKnown RBP9.85□□□□□ -0.83
NEDD1-211ENST00000557454 ADPRHP54922 357 aa9.85□□□□□ -0.83
NEDD1-211ENST00000557454 SFSWAPQ12872 951 aaKnown RBP9.85□□□□□ -0.83
NEDD1-211ENST00000557454 PERM1Q5SV97 790 aa9.85□□□□□ -0.83
NEDD1-211ENST00000557454 CRELD2Q6UXH1 353 aaPredicted RBP9.85□□□□□ -0.83
NEDD1-211ENST00000557454 LIMS2Q7Z4I7 341 aa9.85□□□□□ -0.83
NEDD1-211ENST00000557454 B3GNT8Q7Z7M8 397 aa9.85□□□□□ -0.83
NEDD1-211ENST00000557454 NT5DC4Q86YG4 428 aa9.85□□□□□ -0.83
NEDD1-211ENST00000557454 OR14C36Q8NHC7 312 aa9.85□□□□□ -0.83
NEDD1-211ENST00000557454 KCNK16Q96T55 309 aa9.85□□□□□ -0.83
NEDD1-211ENST00000557454 OMDQ99983 421 aa9.85□□□□□ -0.83
NEDD1-211ENST00000557454 DPEP3Q9H4B8 488 aa9.85□□□□□ -0.83
NEDD1-211ENST00000557454 EPB41L5Q9HCM4 733 aa9.85□□□□□ -0.83
NEDD1-211ENST00000557454 DONSONQ9NYP3 566 aa9.85□□□□□ -0.83
NEDD1-211ENST00000557454 PISDQ9UG56 409 aa9.85□□□□□ -0.83
NEDD1-211ENST00000557454 SIX4Q9UIU6 781 aa9.85□□□□□ -0.83
NEDD1-211ENST00000557454 KCNG1Q9UIX4 513 aa9.85□□□□□ -0.83
NEDD1-211ENST00000557454 AGO2Q9UKV8 859 aaKnown RBP9.85□□□□□ -0.83
NEDD1-211ENST00000557454 FZD4Q9ULV1 537 aa9.85□□□□□ -0.83
NEDD1-211ENST00000557454 SCML1Q9UN30 329 aa9.85□□□□□ -0.83
NEDD1-211ENST00000557454 PLA2G4CQ9UP65 541 aa9.85□□□□□ -0.83
NEDD1-211ENST00000557454 HIVEP3Q5T1R4 2406 aa9.84□□□□□ -0.83
NEDD1-211ENST00000557454 STC2O76061 302 aa9.84□□□□□ -0.83
NEDD1-211ENST00000557454 KLKB1P03952 638 aa9.84□□□□□ -0.83
NEDD1-211ENST00000557454 ATP5C1P36542 298 aaKnown RBP9.84□□□□□ -0.83
NEDD1-211ENST00000557454 OVGP1Q12889 678 aa9.84□□□□□ -0.83
NEDD1-211ENST00000557454 KLRB1Q12918 225 aa9.84□□□□□ -0.83
NEDD1-211ENST00000557454 CST6Q15828 149 aa9.84□□□□□ -0.83
NEDD1-211ENST00000557454 LACTB2Q53H82 288 aaPredicted RBP9.84□□□□□ -0.83
NEDD1-211ENST00000557454 CHST9Q7L1S5 443 aa9.84□□□□□ -0.83
NEDD1-211ENST00000557454 RAB11FIP2Q7L804 512 aa9.84□□□□□ -0.83
NEDD1-211ENST00000557454 DSG4Q86SJ6 1040 aa9.84□□□□□ -0.83
NEDD1-211ENST00000557454 FAM114A1Q8IWE2 563 aa9.84□□□□□ -0.83
NEDD1-211ENST00000557454 ZC3H3Q8IXZ2 948 aaKnown RBP9.84□□□□□ -0.83
NEDD1-211ENST00000557454 DIS3L2Q8IYB7 885 aaKnown RBP9.84□□□□□ -0.83
NEDD1-211ENST00000557454 GALNT11Q8NCW6 608 aa9.84□□□□□ -0.83
NEDD1-211ENST00000557454 OR6B3Q8NGW1 331 aa9.84□□□□□ -0.83
NEDD1-211ENST00000557454 TPCN2Q8NHX9 752 aa9.84□□□□□ -0.83
NEDD1-211ENST00000557454 KCNN1Q92952 543 aa9.84□□□□□ -0.83
NEDD1-211ENST00000557454 MRPL45Q9BRJ2 306 aaKnown RBP9.84□□□□□ -0.83
NEDD1-211ENST00000557454 DUSP23Q9BVJ7 150 aa9.84□□□□□ -0.83
NEDD1-211ENST00000557454 B3GNT5Q9BYG0 378 aa9.84□□□□□ -0.83
NEDD1-211ENST00000557454 KLHL11Q9NVR0 708 aa9.84□□□□□ -0.83
NEDD1-211ENST00000557454 OSER1Q9NX31 292 aa9.84□□□□□ -0.83
NEDD1-211ENST00000557454 IL37Q9NZH6 218 aa9.84□□□□□ -0.83
NEDD1-211ENST00000557454 FOXJ2Q9P0K8 574 aa9.84□□□□□ -0.83
NEDD1-211ENST00000557454 ARHGAP20Q9P2F6 1191 aa9.84□□□□□ -0.83
NEDD1-211ENST00000557454 NUDT5Q9UKK9 219 aa9.84□□□□□ -0.83
NEDD1-211ENST00000557454 ITGA11Q9UKX5 1188 aa9.84□□□□□ -0.83
NEDD1-211ENST00000557454 PCDHB11Q9Y5F2 797 aa9.84□□□□□ -0.83
NEDD1-211ENST00000557454 ANKHD1Q8IWZ3 2542 aaKnown RBP9.83□□□□□ -0.84
NEDD1-211ENST00000557454 PRAMEF33A0A0G2JMD5 474 aa9.83□□□□□ -0.84
NEDD1-211ENST00000557454 FAM92AA1XBS5 289 aa9.83□□□□□ -0.84
NEDD1-211ENST00000557454 PRR19A6NJB7 356 aa9.83□□□□□ -0.84
NEDD1-211ENST00000557454 PP2D1A8MPX8 630 aa9.83□□□□□ -0.84
NEDD1-211ENST00000557454 SCAMP1O15126 338 aa9.83□□□□□ -0.84
NEDD1-211ENST00000557454 NVLO15381 856 aaKnown RBP9.83□□□□□ -0.84
NEDD1-211ENST00000557454 PRAMEF10O60809 474 aa9.83□□□□□ -0.84
NEDD1-211ENST00000557454 SIN3BO75182 1162 aa9.83□□□□□ -0.84
NEDD1-211ENST00000557454 CDKL5O76039 1030 aa9.83□□□□□ -0.84
NEDD1-211ENST00000557454 CYBBP04839 570 aa9.83□□□□□ -0.84
NEDD1-211ENST00000557454 PTPN1P18031 435 aaKnown RBP9.83□□□□□ -0.84
NEDD1-211ENST00000557454 HLA-FP30511 346 aa9.83□□□□□ -0.84
NEDD1-211ENST00000557454 RBP5P82980 135 aa9.83□□□□□ -0.84
NEDD1-211ENST00000557454 KCNMA1Q12791 1236 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms