RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 DDX18Q9NVP1 670 aaKnown RBP12.91□□□□□ -0.34
APEX1-216ENST00000557159 FBXO40Q9UH90 709 aa12.91□□□□□ -0.34
APEX1-216ENST00000557159 PAIP2BQ9ULR5 123 aaKnown RBP12.91□□□□□ -0.34
APEX1-216ENST00000557159 RIPK3Q9Y572 518 aa12.91□□□□□ -0.34
APEX1-216ENST00000557159 COL11A1P12107 1806 aaPredicted RBP12.9□□□□□ -0.34
APEX1-216ENST00000557159 CCDC195A0A1B0GUA6 201 aa12.9□□□□□ -0.34
APEX1-216ENST00000557159 PRSS51A0A1B0GVH4 220 aa12.9□□□□□ -0.34
APEX1-216ENST00000557159 PDHXO00330 501 aa12.9□□□□□ -0.34
APEX1-216ENST00000557159 ADCY3O60266 1144 aa12.9□□□□□ -0.34
APEX1-216ENST00000557159 PLIN3O60664 434 aa12.9□□□□□ -0.34
APEX1-216ENST00000557159 ALDH1A2O94788 518 aa12.9□□□□□ -0.34
APEX1-216ENST00000557159 ATG7O95352 703 aa12.9□□□□□ -0.34
APEX1-216ENST00000557159 CCNE2O96020 404 aa12.9□□□□□ -0.34
APEX1-216ENST00000557159 ASS1P00966 412 aaKnown RBP12.9□□□□□ -0.34
APEX1-216ENST00000557159 C8BP07358 591 aa12.9□□□□□ -0.34
APEX1-216ENST00000557159 HNRNPCP07910 306 aaKnown RBP eCLIP12.9□□□□□ -0.34
APEX1-216ENST00000557159 TPSB2P20231 275 aa12.9□□□□□ -0.34
APEX1-216ENST00000557159 HK2P52789 917 aa12.9□□□□□ -0.34
APEX1-216ENST00000557159 NUP107P57740 925 aa12.9□□□□□ -0.34
APEX1-216ENST00000557159 CBX3Q13185 183 aa12.9□□□□□ -0.34
APEX1-216ENST00000557159 TMED1Q13445 227 aa12.9□□□□□ -0.34
APEX1-216ENST00000557159 TPSAB1Q15661 275 aa12.9□□□□□ -0.34
APEX1-216ENST00000557159 C1QTNF12Q5T7M4 302 aa12.9□□□□□ -0.34
APEX1-216ENST00000557159 KLHL35Q6PF15 583 aa12.9□□□□□ -0.34
APEX1-216ENST00000557159 DARS2Q6PI48 645 aaKnown RBP12.9□□□□□ -0.34
APEX1-216ENST00000557159 PACS1Q6VY07 963 aa12.9□□□□□ -0.34
APEX1-216ENST00000557159 TSHZ1Q6ZSZ6 1077 aa12.9□□□□□ -0.34
APEX1-216ENST00000557159 RFX6Q8HWS3 928 aa12.9□□□□□ -0.34
APEX1-216ENST00000557159 WDTC1Q8N5D0 677 aa12.9□□□□□ -0.34
APEX1-216ENST00000557159 CFAP36Q96G28 342 aa12.9□□□□□ -0.34
APEX1-216ENST00000557159 VPS50Q96JG6 964 aa12.9□□□□□ -0.34
APEX1-216ENST00000557159 KIFC3Q9BVG8 833 aa12.9□□□□□ -0.34
APEX1-216ENST00000557159 IMPG2Q9BZV3 1241 aa12.9□□□□□ -0.34
APEX1-216ENST00000557159 MOCS1Q9NZB8 636 aa12.9□□□□□ -0.34
APEX1-216ENST00000557159 AGO2Q9UKV8 859 aaKnown RBP12.9□□□□□ -0.34
APEX1-216ENST00000557159 KANSL1LA0AUZ9 987 aa12.9□□□□□ -0.34
APEX1-216ENST00000557159 BCLAF3A2AJT9 711 aaKnown RBP12.9□□□□□ -0.34
APEX1-216ENST00000557159 CCDC160A6NGH7 325 aa12.9□□□□□ -0.34
APEX1-216ENST00000557159 SPATA31C2B4DYI2 1134 aa12.9□□□□□ -0.34
APEX1-216ENST00000557159 ITM2AO43736 263 aa12.9□□□□□ -0.34
APEX1-216ENST00000557159 CSH1P0DML2 217 aa12.9□□□□□ -0.34
APEX1-216ENST00000557159 CSH2P0DML3 217 aa12.9□□□□□ -0.34
APEX1-216ENST00000557159 THRAP10827 490 aa12.9□□□□□ -0.34
APEX1-216ENST00000557159 KRT3P12035 628 aa12.9□□□□□ -0.34
APEX1-216ENST00000557159 KCNA2P16389 499 aa12.9□□□□□ -0.34
APEX1-216ENST00000557159 PORP16435 677 aaPredicted RBP12.9□□□□□ -0.34
APEX1-216ENST00000557159 PCSK6P29122 969 aa12.9□□□□□ -0.34
APEX1-216ENST00000557159 RFC1P35251 1148 aaPredicted RBP12.9□□□□□ -0.34
APEX1-216ENST00000557159 ERFP50548 548 aa12.9□□□□□ -0.34
APEX1-216ENST00000557159 NLRP11P59045 1033 aaKnown RBP12.9□□□□□ -0.34
APEX1-216ENST00000557159 DPYSQ14117 519 aa12.9□□□□□ -0.34
APEX1-216ENST00000557159 RFTN1Q14699 578 aaPredicted RBP12.9□□□□□ -0.34
APEX1-216ENST00000557159 TMEM132BQ14DG7 1078 aa12.9□□□□□ -0.34
APEX1-216ENST00000557159 STEAP4Q687X5 459 aa12.9□□□□□ -0.34
APEX1-216ENST00000557159 UNC5AQ6ZN44 842 aa12.9□□□□□ -0.34
APEX1-216ENST00000557159 POU5F2Q8N7G0 328 aa12.9□□□□□ -0.34
APEX1-216ENST00000557159 KBTBD7Q8WVZ9 684 aa12.9□□□□□ -0.34
APEX1-216ENST00000557159 ACSF2Q96CM8 615 aaPredicted RBP12.9□□□□□ -0.34
APEX1-216ENST00000557159 CCDC124Q96CT7 223 aaKnown RBP12.9□□□□□ -0.34
APEX1-216ENST00000557159 EBNA1BP2Q99848 306 aaKnown RBP12.9□□□□□ -0.34
APEX1-216ENST00000557159 JPH1Q9HDC5 661 aaPredicted RBP12.9□□□□□ -0.34
APEX1-216ENST00000557159 EMCNQ9ULC0 261 aa12.9□□□□□ -0.34
APEX1-216ENST00000557159 GNEQ9Y223 722 aaKnown RBP12.9□□□□□ -0.34
APEX1-216ENST00000557159 PCDHA11Q9Y5I1 949 aa12.9□□□□□ -0.34
APEX1-216ENST00000557159 CDY2AQ9Y6F7 541 aa12.9□□□□□ -0.34
APEX1-216ENST00000557159 CDY1Q9Y6F8 540 aa12.9□□□□□ -0.34
APEX1-216ENST00000557159 KIAA1217Q5T5P2 1943 aa12.9□□□□□ -0.34
APEX1-216ENST00000557159 PTPRJQ12913 1337 aa12.89□□□□□ -0.35
APEX1-216ENST00000557159 ZNF487B1APH4 448 aa12.89□□□□□ -0.35
APEX1-216ENST00000557159 TOM1L1O75674 476 aa12.89□□□□□ -0.35
APEX1-216ENST00000557159 STK10O94804 968 aaKnown RBP12.89□□□□□ -0.35
APEX1-216ENST00000557159 TGM2P21980 687 aa12.89□□□□□ -0.35
APEX1-216ENST00000557159 ICAM3P32942 547 aa12.89□□□□□ -0.35
APEX1-216ENST00000557159 LIG4P49917 911 aa12.89□□□□□ -0.35
APEX1-216ENST00000557159 YWHAEP62258 255 aaKnown RBP12.89□□□□□ -0.35
APEX1-216ENST00000557159 KLF10Q13118 480 aa12.89□□□□□ -0.35
APEX1-216ENST00000557159 PCLAFQ15004 111 aa12.89□□□□□ -0.35
APEX1-216ENST00000557159 HERC3Q15034 1050 aa12.89□□□□□ -0.35
APEX1-216ENST00000557159 STXBP2Q15833 593 aa12.89□□□□□ -0.35
APEX1-216ENST00000557159 TCHHL1Q5QJ38 904 aaPredicted RBP12.89□□□□□ -0.35
APEX1-216ENST00000557159 IRAK1BP1Q5VVH5 260 aa12.89□□□□□ -0.35
APEX1-216ENST00000557159 RWDD4Q6NW29 188 aaKnown RBP12.89□□□□□ -0.35
APEX1-216ENST00000557159 POTEHQ6S545 545 aa12.89□□□□□ -0.35
APEX1-216ENST00000557159 EPGNQ6UW88 154 aa12.89□□□□□ -0.35
APEX1-216ENST00000557159 CHERPQ8IWX8 916 aaKnown RBP12.89□□□□□ -0.35
APEX1-216ENST00000557159 KCTD6Q8NC69 237 aa12.89□□□□□ -0.35
APEX1-216ENST00000557159 HM13Q8TCT9 377 aa12.89□□□□□ -0.35
APEX1-216ENST00000557159 USP6NLQ92738 828 aa12.89□□□□□ -0.35
APEX1-216ENST00000557159 CEP170P1Q96L14 293 aa12.89□□□□□ -0.35
APEX1-216ENST00000557159 SIGLEC10Q96LC7 697 aa12.89□□□□□ -0.35
APEX1-216ENST00000557159 PRPF18Q99633 342 aaKnown RBP12.89□□□□□ -0.35
APEX1-216ENST00000557159 C10orf88Q9H8K7 445 aa12.89□□□□□ -0.35
APEX1-216ENST00000557159 VPS45Q9NRW7 570 aa12.89□□□□□ -0.35
APEX1-216ENST00000557159 TUBA8Q9NY65 449 aaPredicted RBP12.89□□□□□ -0.35
APEX1-216ENST00000557159 HACD3Q9P035 362 aa12.89□□□□□ -0.35
APEX1-216ENST00000557159 PCDHB12Q9Y5F1 795 aa12.89□□□□□ -0.35
APEX1-216ENST00000557159 CNTNAP2Q9UHC6 1331 aa12.89□□□□□ -0.35
APEX1-216ENST00000557159 TRIM64CA6NLI5 447 aa12.88□□□□□ -0.35
APEX1-216ENST00000557159 STBD1O95210 358 aa12.88□□□□□ -0.35
APEX1-216ENST00000557159 TRUB2O95900 331 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms