RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 NTPCRQ9BSD7 190 aaKnown RBP6.06□□□□□ -1.44
ATXN3-245ENST00000556958 FUCA2Q9BTY2 467 aa6.06□□□□□ -1.44
ATXN3-245ENST00000556958 DUSP23Q9BVJ7 150 aa6.06□□□□□ -1.44
ATXN3-245ENST00000556958 RWDD1Q9H446 243 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-245ENST00000556958 ASB7Q9H672 318 aa6.06□□□□□ -1.44
ATXN3-245ENST00000556958 POLD4Q9HCU8 107 aa6.06□□□□□ -1.44
ATXN3-245ENST00000556958 ELOVL2Q9NXB9 296 aa6.06□□□□□ -1.44
ATXN3-245ENST00000556958 NCKIPSDQ9NZQ3 722 aa6.06□□□□□ -1.44
ATXN3-245ENST00000556958 LSM7Q9UK45 103 aaKnown RBP6.06□□□□□ -1.44
ATXN3-245ENST00000556958 PLA2G4CQ9UP65 541 aa6.06□□□□□ -1.44
ATXN3-245ENST00000556958 ENTPD2Q9Y5L3 495 aa6.06□□□□□ -1.44
ATXN3-245ENST00000556958 NAV3Q8IVL0 2385 aa6.06□□□□□ -1.44
ATXN3-245ENST00000556958 NUP210Q8TEM1 1887 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-245ENST00000556958 A0A1W2PNU3 283 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-245ENST00000556958 SFI1A8K8P3 1242 aa6.05□□□□□ -1.44
ATXN3-245ENST00000556958 PLD2O14939 933 aa6.05□□□□□ -1.44
ATXN3-245ENST00000556958 NVLO15381 856 aaKnown RBP6.05□□□□□ -1.44
ATXN3-245ENST00000556958 HNRNPRO43390 633 aaKnown RBP6.05□□□□□ -1.44
ATXN3-245ENST00000556958 COCHO43405 550 aa6.05□□□□□ -1.44
ATXN3-245ENST00000556958 RNASEH1O60930 286 aaKnown RBP6.05□□□□□ -1.44
ATXN3-245ENST00000556958 DEXIO95424 95 aa6.05□□□□□ -1.44
ATXN3-245ENST00000556958 STAU1O95793 577 aaKnown RBP6.05□□□□□ -1.44
ATXN3-245ENST00000556958 DGKAP23743 735 aa6.05□□□□□ -1.44
ATXN3-245ENST00000556958 YWHAQP27348 245 aa6.05□□□□□ -1.44
ATXN3-245ENST00000556958 RPA1P27694 616 aa6.05□□□□□ -1.44
ATXN3-245ENST00000556958 SLC6A4P31645 630 aa6.05□□□□□ -1.44
ATXN3-245ENST00000556958 TUBP50607 506 aa6.05□□□□□ -1.44
ATXN3-245ENST00000556958 CCR5P51681 352 aa6.05□□□□□ -1.44
ATXN3-245ENST00000556958 GALCP54803 685 aa6.05□□□□□ -1.44
ATXN3-245ENST00000556958 CYP4F2P78329 520 aa6.05□□□□□ -1.44
ATXN3-245ENST00000556958 NUCB1Q02818 461 aa6.05□□□□□ -1.44
ATXN3-245ENST00000556958 ELOAQ14241 798 aaKnown RBP6.05□□□□□ -1.44
ATXN3-245ENST00000556958 KRT32Q14532 448 aa6.05□□□□□ -1.44
ATXN3-245ENST00000556958 NTRK3Q16288 839 aa6.05□□□□□ -1.44
ATXN3-245ENST00000556958 TMEM164Q5U3C3 297 aa6.05□□□□□ -1.44
ATXN3-245ENST00000556958 FOXD4L5Q5VV16 416 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-245ENST00000556958 DIEXFQ68CQ4 756 aaKnown RBP6.05□□□□□ -1.44
ATXN3-245ENST00000556958 NAPEPLDQ6IQ20 393 aa6.05□□□□□ -1.44
ATXN3-245ENST00000556958 PIK3AP1Q6ZUJ8 805 aa6.05□□□□□ -1.44
ATXN3-245ENST00000556958 TAS1R3Q7RTX0 852 aa6.05□□□□□ -1.44
ATXN3-245ENST00000556958 TIPARPQ7Z3E1 657 aaKnown RBP6.05□□□□□ -1.44
ATXN3-245ENST00000556958 FAM114A1Q8IWE2 563 aa6.05□□□□□ -1.44
ATXN3-245ENST00000556958 SLC25A45Q8N413 288 aa6.05□□□□□ -1.44
ATXN3-245ENST00000556958 FBXO39Q8N4B4 442 aa6.05□□□□□ -1.44
ATXN3-245ENST00000556958 PDCL2Q8N4E4 241 aa6.05□□□□□ -1.44
ATXN3-245ENST00000556958 TEX19Q8NA77 164 aa6.05□□□□□ -1.44
ATXN3-245ENST00000556958 OR2T34Q8NGX1 318 aa6.05□□□□□ -1.44
ATXN3-245ENST00000556958 IFI44Q8TCB0 444 aa6.05□□□□□ -1.44
ATXN3-245ENST00000556958 GTF3C6Q969F1 213 aa6.05□□□□□ -1.44
ATXN3-245ENST00000556958 BICD1Q96G01 975 aa6.05□□□□□ -1.44
ATXN3-245ENST00000556958 C8orf48Q96LL4 319 aa6.05□□□□□ -1.44
ATXN3-245ENST00000556958 TCEANC2Q96MN5 208 aa6.05□□□□□ -1.44
ATXN3-245ENST00000556958 CATSPER2Q96P56 530 aa6.05□□□□□ -1.44
ATXN3-245ENST00000556958 KRTAP4-7Q9BYR0 210 aa6.05□□□□□ -1.44
ATXN3-245ENST00000556958 CIPCQ9C0C6 399 aa6.05□□□□□ -1.44
ATXN3-245ENST00000556958 ZNF71Q9NQZ8 489 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-245ENST00000556958 RAB6BQ9NRW1 208 aa6.05□□□□□ -1.44
ATXN3-245ENST00000556958 DPP3Q9NY33 737 aa6.05□□□□□ -1.44
ATXN3-245ENST00000556958 C2CD2Q9Y426 696 aa6.05□□□□□ -1.44
ATXN3-245ENST00000556958 SNX14Q9Y5W7 946 aa6.05□□□□□ -1.44
ATXN3-245ENST00000556958 HELZP42694 1942 aaKnown RBP6.05□□□□□ -1.44
ATXN3-245ENST00000556958 KIF26AQ9ULI4 1882 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-245ENST00000556958 H0YCG3 227 aa6.04□□□□□ -1.44
ATXN3-245ENST00000556958 CPLX1O14810 134 aa6.04□□□□□ -1.44
ATXN3-245ENST00000556958 OGTO15294 1046 aa6.04□□□□□ -1.44
ATXN3-245ENST00000556958 SLC16A4O15374 487 aa6.04□□□□□ -1.44
ATXN3-245ENST00000556958 SDC3O75056 442 aa6.04□□□□□ -1.44
ATXN3-245ENST00000556958 RTN2O75298 545 aa6.04□□□□□ -1.44
ATXN3-245ENST00000556958 SEMA7AO75326 666 aa6.04□□□□□ -1.44
ATXN3-245ENST00000556958 MED24O75448 989 aa6.04□□□□□ -1.44
ATXN3-245ENST00000556958 RTN3O95197 1032 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-245ENST00000556958 PRKCGP05129 697 aa6.04□□□□□ -1.44
ATXN3-245ENST00000556958 CENPBP07199 599 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-245ENST00000556958 OR52Z1P0C646 297 aa6.04□□□□□ -1.44
ATXN3-245ENST00000556958 IRF1P10914 325 aa6.04□□□□□ -1.44
ATXN3-245ENST00000556958 GNLYP22749 145 aa6.04□□□□□ -1.44
ATXN3-245ENST00000556958 BDNFP23560 247 aa6.04□□□□□ -1.44
ATXN3-245ENST00000556958 PRKCHP24723 683 aa6.04□□□□□ -1.44
ATXN3-245ENST00000556958 ACAT1P24752 427 aaKnown RBP6.04□□□□□ -1.44
ATXN3-245ENST00000556958 NUDT1P36639 197 aa6.04□□□□□ -1.44
ATXN3-245ENST00000556958 MFAP3P55082 362 aa6.04□□□□□ -1.44
ATXN3-245ENST00000556958 GDF10P55107 478 aa6.04□□□□□ -1.44
ATXN3-245ENST00000556958 RPS14P62263 151 aaKnown RBP6.04□□□□□ -1.44
ATXN3-245ENST00000556958 STAT4Q14765 748 aa6.04□□□□□ -1.44
ATXN3-245ENST00000556958 FOXD4L6Q3SYB3 417 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-245ENST00000556958 ZNF776Q68DI1 518 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-245ENST00000556958 FAM171BQ6P995 826 aa6.04□□□□□ -1.44
ATXN3-245ENST00000556958 NCEH1Q6PIU2 408 aa6.04□□□□□ -1.44
ATXN3-245ENST00000556958 CPLX2Q6PUV4 134 aaKnown RBP6.04□□□□□ -1.44
ATXN3-245ENST00000556958 FOXD4L3Q6VB84 417 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-245ENST00000556958 ANKS1BQ7Z6G8 1248 aa6.04□□□□□ -1.44
ATXN3-245ENST00000556958 SPATS2Q86XZ4 545 aaKnown RBP6.04□□□□□ -1.44
ATXN3-245ENST00000556958 SMC5Q8IY18 1101 aa6.04□□□□□ -1.44
ATXN3-245ENST00000556958 HTR3CQ8WXA8 447 aa6.04□□□□□ -1.44
ATXN3-245ENST00000556958 ARRDC3Q96B67 414 aa6.04□□□□□ -1.44
ATXN3-245ENST00000556958 APOLD1Q96LR9 279 aa6.04□□□□□ -1.44
ATXN3-245ENST00000556958 PKMYT1Q99640 499 aa6.04□□□□□ -1.44
ATXN3-245ENST00000556958 STRADBQ9C0K7 418 aa6.04□□□□□ -1.44
ATXN3-245ENST00000556958 BHMT2Q9H2M3 363 aa6.04□□□□□ -1.44
ATXN3-245ENST00000556958 GJB4Q9NTQ9 266 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms