RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 IRAK1P51617 712 aa18.09■□□□□ 0.49
SHMT2-225ENST00000556798 AUHQ13825 339 aaKnown RBP18.09■□□□□ 0.49
SHMT2-225ENST00000556798 LRRC32Q14392 662 aa18.09■□□□□ 0.49
SHMT2-225ENST00000556798 DAB2IPQ5VWQ8 1189 aa18.09■□□□□ 0.49
SHMT2-225ENST00000556798 FBXL22Q6P050 247 aa18.09■□□□□ 0.49
SHMT2-225ENST00000556798 SCYL2Q6P3W7 929 aa18.09■□□□□ 0.49
SHMT2-225ENST00000556798 Q6ZS52 159 aa18.09■□□□□ 0.49
SHMT2-225ENST00000556798 C14orf80Q86SX3 495 aa18.09■□□□□ 0.49
SHMT2-225ENST00000556798 CIR1Q86X95 450 aaPredicted RBP18.09■□□□□ 0.49
SHMT2-225ENST00000556798 EXOC4Q96A65 974 aa18.09■□□□□ 0.49
SHMT2-225ENST00000556798 DLGAP2Q9P1A6 1054 aa18.09■□□□□ 0.49
SHMT2-225ENST00000556798 ANAPC7Q9UJX3 599 aa18.09■□□□□ 0.49
SHMT2-225ENST00000556798 TYW5A2RUC4 315 aaKnown RBP18.08■□□□□ 0.48
SHMT2-225ENST00000556798 NCAM2O15394 837 aa18.08■□□□□ 0.48
SHMT2-225ENST00000556798 APODP05090 189 aa18.08■□□□□ 0.48
SHMT2-225ENST00000556798 TMEM253P0C7T8 217 aa18.08■□□□□ 0.48
SHMT2-225ENST00000556798 AVPR2P30518 371 aa18.08■□□□□ 0.48
SHMT2-225ENST00000556798 SEC13P55735 322 aa18.08■□□□□ 0.48
SHMT2-225ENST00000556798 TMTC1Q8IUR5 882 aa18.08■□□□□ 0.48
SHMT2-225ENST00000556798 TMEM139Q8IV31 216 aa18.08■□□□□ 0.48
SHMT2-225ENST00000556798 CCDC170Q8IYT3 715 aa18.08■□□□□ 0.48
SHMT2-225ENST00000556798 TERB1Q8NA31 727 aa18.08■□□□□ 0.48
SHMT2-225ENST00000556798 ZNF564Q8TBZ8 553 aaPredicted RBP18.08■□□□□ 0.48
SHMT2-225ENST00000556798 WFDC5Q8TCV5 224 aa18.08■□□□□ 0.48
SHMT2-225ENST00000556798 FNIP1Q8TF40 1166 aa18.08■□□□□ 0.48
SHMT2-225ENST00000556798 IGSF8Q969P0 613 aa18.08■□□□□ 0.48
SHMT2-225ENST00000556798 CLDN23Q96B33 292 aa18.08■□□□□ 0.48
SHMT2-225ENST00000556798 RPRD1AQ96P16 312 aaPredicted RBP18.08■□□□□ 0.48
SHMT2-225ENST00000556798 BAG1Q99933 345 aaPredicted RBP18.08■□□□□ 0.48
SHMT2-225ENST00000556798 MAGEB5Q9BZ81 275 aa18.08■□□□□ 0.48
SHMT2-225ENST00000556798 CTTNBP2NLQ9P2B4 639 aa18.08■□□□□ 0.48
SHMT2-225ENST00000556798 CACNA1IQ9P0X4 2223 aa18.08■□□□□ 0.48
SHMT2-225ENST00000556798 K7EQS6 105 aa18.07■□□□□ 0.48
SHMT2-225ENST00000556798 RNF40O75150 1001 aa18.07■□□□□ 0.48
SHMT2-225ENST00000556798 CISD3P0C7P0 127 aa18.07■□□□□ 0.48
SHMT2-225ENST00000556798 DESP17661 470 aa18.07■□□□□ 0.48
SHMT2-225ENST00000556798 ADRA1BP35368 520 aa18.07■□□□□ 0.48
SHMT2-225ENST00000556798 CYLC1P35663 651 aaPredicted RBP18.07■□□□□ 0.48
SHMT2-225ENST00000556798 GRIA2P42262 883 aa18.07■□□□□ 0.48
SHMT2-225ENST00000556798 MTA1Q13330 715 aa18.07■□□□□ 0.48
SHMT2-225ENST00000556798 DGKKQ5KSL6 1271 aa18.07■□□□□ 0.48
SHMT2-225ENST00000556798 C10orf76Q5T2E6 689 aa18.07■□□□□ 0.48
SHMT2-225ENST00000556798 RAD9BQ6WBX8 426 aa18.07■□□□□ 0.48
SHMT2-225ENST00000556798 CARNMT1Q8N4J0 409 aa18.07■□□□□ 0.48
SHMT2-225ENST00000556798 ARFGAP1Q8N6T3 406 aa18.07■□□□□ 0.48
SHMT2-225ENST00000556798 TMEM51Q9NW97 253 aa18.07■□□□□ 0.48
SHMT2-225ENST00000556798 FBXO10Q9UK96 956 aa18.07■□□□□ 0.48
SHMT2-225ENST00000556798 TFR2Q9UP52 801 aa18.07■□□□□ 0.48
SHMT2-225ENST00000556798 TBC1D3BA6NDS4 549 aa18.06■□□□□ 0.48
SHMT2-225ENST00000556798 LUC7L3O95232 432 aaKnown RBP18.06■□□□□ 0.48
SHMT2-225ENST00000556798 LCA5LO95447 670 aa18.06■□□□□ 0.48
SHMT2-225ENST00000556798 MAGEA1P43355 309 aa18.06■□□□□ 0.48
SHMT2-225ENST00000556798 GAS6Q14393 721 aa18.06■□□□□ 0.48
SHMT2-225ENST00000556798 GEN1Q17RS7 908 aa18.06■□□□□ 0.48
SHMT2-225ENST00000556798 ARL13BQ3SXY8 428 aa18.06■□□□□ 0.48
SHMT2-225ENST00000556798 RABGAP1LQ5R372 815 aa18.06■□□□□ 0.48
SHMT2-225ENST00000556798 MPP7Q5T2T1 576 aa18.06■□□□□ 0.48
SHMT2-225ENST00000556798 PKN3Q6P5Z2 889 aa18.06■□□□□ 0.48
SHMT2-225ENST00000556798 MFN1Q8IWA4 741 aa18.06■□□□□ 0.48
SHMT2-225ENST00000556798 ZNF683Q8IZ20 524 aa18.06■□□□□ 0.48
SHMT2-225ENST00000556798 NTAN1Q96AB6 310 aa18.06■□□□□ 0.48
SHMT2-225ENST00000556798 HAPLN3Q96S86 360 aa18.06■□□□□ 0.48
SHMT2-225ENST00000556798 PEBP4Q96S96 227 aa18.06■□□□□ 0.48
SHMT2-225ENST00000556798 IRX2Q9BZI1 471 aaPredicted RBP18.06■□□□□ 0.48
SHMT2-225ENST00000556798 CHRDQ9H2X0 955 aa18.06■□□□□ 0.48
SHMT2-225ENST00000556798 OSGEPQ9NPF4 335 aa18.06■□□□□ 0.48
SHMT2-225ENST00000556798 ZDHHC4Q9NPG8 344 aa18.06■□□□□ 0.48
SHMT2-225ENST00000556798 PCSK1NQ9UHG2 260 aa18.06■□□□□ 0.48
SHMT2-225ENST00000556798 EPN1Q9Y6I3 576 aaPredicted RBP18.06■□□□□ 0.48
SHMT2-225ENST00000556798 MUC22E2RYF6 1773 aaPredicted RBP18.06■□□□□ 0.48
SHMT2-225ENST00000556798 PRRT4C9JH25 899 aa18.05■□□□□ 0.48
SHMT2-225ENST00000556798 E9PAM4 449 aa18.05■□□□□ 0.48
SHMT2-225ENST00000556798 SRGAP2O75044 1071 aa18.05■□□□□ 0.48
SHMT2-225ENST00000556798 LRCH4O75427 683 aa18.05■□□□□ 0.48
SHMT2-225ENST00000556798 RNF8O76064 485 aa18.05■□□□□ 0.48
SHMT2-225ENST00000556798 NDUFA10O95299 355 aa18.05■□□□□ 0.48
SHMT2-225ENST00000556798 MIPP30301 263 aa18.05■□□□□ 0.48
SHMT2-225ENST00000556798 HLA-FP30511 346 aa18.05■□□□□ 0.48
SHMT2-225ENST00000556798 CD70P32970 193 aa18.05■□□□□ 0.48
SHMT2-225ENST00000556798 RPS9P46781 194 aaKnown RBP18.05■□□□□ 0.48
SHMT2-225ENST00000556798 GSDMDP57764 484 aa18.05■□□□□ 0.48
SHMT2-225ENST00000556798 MTAPQ13126 283 aa18.05■□□□□ 0.48
SHMT2-225ENST00000556798 CDH18Q13634 790 aa18.05■□□□□ 0.48
SHMT2-225ENST00000556798 SPA17Q15506 151 aa18.05■□□□□ 0.48
SHMT2-225ENST00000556798 RNF43Q68DV7 783 aa18.05■□□□□ 0.48
SHMT2-225ENST00000556798 SLFN11Q7Z7L1 901 aa18.05■□□□□ 0.48
SHMT2-225ENST00000556798 CPNE8Q86YQ8 564 aa18.05■□□□□ 0.48
SHMT2-225ENST00000556798 PYROXD2Q8N2H3 581 aa18.05■□□□□ 0.48
SHMT2-225ENST00000556798 SLC2A11Q9BYW1 496 aa18.05■□□□□ 0.48
SHMT2-225ENST00000556798 ABCB8Q9NUT2 735 aa18.05■□□□□ 0.48
SHMT2-225ENST00000556798 GPATCH2LQ9NWQ4 482 aa18.05■□□□□ 0.48
SHMT2-225ENST00000556798 UVRAGQ9P2Y5 699 aa18.05■□□□□ 0.48
SHMT2-225ENST00000556798 IP6K2Q9UHH9 426 aa18.05■□□□□ 0.48
SHMT2-225ENST00000556798 PCDHA13Q9Y5I0 950 aa18.05■□□□□ 0.48
SHMT2-225ENST00000556798 EIF3CLB5ME19 914 aaKnown RBP18.04■□□□□ 0.48
SHMT2-225ENST00000556798 FAM72CH0Y354 149 aa18.04■□□□□ 0.48
SHMT2-225ENST00000556798 CNTN5O94779 1100 aa18.04■□□□□ 0.48
SHMT2-225ENST00000556798 TCF4P15884 667 aa18.04■□□□□ 0.48
SHMT2-225ENST00000556798 MRE11P49959 708 aa18.04■□□□□ 0.48
SHMT2-225ENST00000556798 SCAPQ12770 1279 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms