RNA–Protein interactions for RNA: ENST00000556523.1

SDR39U1-219, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-219ENST00000556523 GANCQ8TET4 914 aa18.34■□□□□ 0.53
SDR39U1-219ENST00000556523 IRGQQ8WZA9 623 aa18.34■□□□□ 0.53
SDR39U1-219ENST00000556523 SLC35C1Q96A29 364 aa18.34■□□□□ 0.53
SDR39U1-219ENST00000556523 GSDMAQ96QA5 445 aa18.34■□□□□ 0.53
SDR39U1-219ENST00000556523 DDX50Q9BQ39 737 aaKnown RBP18.34■□□□□ 0.53
SDR39U1-219ENST00000556523 SGK2Q9HBY8 427 aa18.34■□□□□ 0.53
SDR39U1-219ENST00000556523 TM9SF3Q9HD45 589 aa18.34■□□□□ 0.53
SDR39U1-219ENST00000556523 PRSS16Q9NQE7 514 aa18.34■□□□□ 0.53
SDR39U1-219ENST00000556523 NCKAP1Q9Y2A7 1128 aa18.34■□□□□ 0.53
SDR39U1-219ENST00000556523 PCDHB4Q9Y5E5 795 aa18.34■□□□□ 0.53
SDR39U1-219ENST00000556523 KNL1Q8NG31 2342 aa18.34■□□□□ 0.53
SDR39U1-219ENST00000556523 ASPMQ8IZT6 3477 aa18.34■□□□□ 0.53
SDR39U1-219ENST00000556523 ANKRD11Q6UB99 2663 aaPredicted RBP18.34■□□□□ 0.53
SDR39U1-219ENST00000556523 CCT8P50990 548 aa18.33■□□□□ 0.52
SDR39U1-219ENST00000556523 SGSHP51688 502 aa18.33■□□□□ 0.52
SDR39U1-219ENST00000556523 TBX4P57082 545 aa18.33■□□□□ 0.52
SDR39U1-219ENST00000556523 STILQ15468 1287 aa18.33■□□□□ 0.52
SDR39U1-219ENST00000556523 PTPRNQ16849 979 aa18.33■□□□□ 0.52
SDR39U1-219ENST00000556523 KIF19Q2TAC6 998 aa18.33■□□□□ 0.52
SDR39U1-219ENST00000556523 INAVAQ3KP66 663 aa18.33■□□□□ 0.52
SDR39U1-219ENST00000556523 KIAA0907Q7Z7F0 614 aaPredicted RBP18.33■□□□□ 0.52
SDR39U1-219ENST00000556523 SLCO6A1Q86UG4 719 aa18.33■□□□□ 0.52
SDR39U1-219ENST00000556523 PPM1KQ8N3J5 372 aa18.33■□□□□ 0.52
SDR39U1-219ENST00000556523 UBR7Q8N806 425 aa18.33■□□□□ 0.52
SDR39U1-219ENST00000556523 HJURPQ8NCD3 748 aaPredicted RBP18.33■□□□□ 0.52
SDR39U1-219ENST00000556523 C1orf216Q8TAB5 229 aa18.33■□□□□ 0.52
SDR39U1-219ENST00000556523 WFDC5Q8TCV5 224 aa18.33■□□□□ 0.52
SDR39U1-219ENST00000556523 SMARCE1Q969G3 411 aa18.33■□□□□ 0.52
SDR39U1-219ENST00000556523 METTL14Q9HCE5 456 aaKnown RBP18.33■□□□□ 0.52
SDR39U1-219ENST00000556523 OSGEPQ9NPF4 335 aa18.33■□□□□ 0.52
SDR39U1-219ENST00000556523 STIM2Q9P246 746 aa18.33■□□□□ 0.52
SDR39U1-219ENST00000556523 HOOK1Q9UJC3 728 aaKnown RBP18.33■□□□□ 0.52
SDR39U1-219ENST00000556523 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.33■□□□□ 0.52
SDR39U1-219ENST00000556523 SNX11Q9Y5W9 270 aa18.33■□□□□ 0.52
SDR39U1-219ENST00000556523 CABIN1Q9Y6J0 2220 aa18.33■□□□□ 0.52
SDR39U1-219ENST00000556523 ACACAQ13085 2346 aa18.32■□□□□ 0.52
SDR39U1-219ENST00000556523 SPEGQ15772 3267 aa18.32■□□□□ 0.52
SDR39U1-219ENST00000556523 TRIM49BA6NDI0 452 aa18.32■□□□□ 0.52
SDR39U1-219ENST00000556523 GOLGA8CPA6NN73 597 aa18.32■□□□□ 0.52
SDR39U1-219ENST00000556523 PIK3R2O00459 728 aa18.32■□□□□ 0.52
SDR39U1-219ENST00000556523 PSMA7O14818 248 aa18.32■□□□□ 0.52
SDR39U1-219ENST00000556523 ACSL4O60488 711 aa18.32■□□□□ 0.52
SDR39U1-219ENST00000556523 RNASEH1O60930 286 aaKnown RBP18.32■□□□□ 0.52
SDR39U1-219ENST00000556523 FBXO21O94952 628 aa18.32■□□□□ 0.52
SDR39U1-219ENST00000556523 IGLV3-27P01718 113 aa18.32■□□□□ 0.52
SDR39U1-219ENST00000556523 BRD2P25440 801 aaKnown RBP18.32■□□□□ 0.52
SDR39U1-219ENST00000556523 CD27P26842 260 aa18.32■□□□□ 0.52
SDR39U1-219ENST00000556523 CD70P32970 193 aa18.32■□□□□ 0.52
SDR39U1-219ENST00000556523 FMO5P49326 533 aa18.32■□□□□ 0.52
SDR39U1-219ENST00000556523 PMS1P54277 932 aaKnown RBP18.32■□□□□ 0.52
SDR39U1-219ENST00000556523 CETN1Q12798 172 aa18.32■□□□□ 0.52
SDR39U1-219ENST00000556523 SFSWAPQ12872 951 aaKnown RBP18.32■□□□□ 0.52
SDR39U1-219ENST00000556523 CCDC40Q4G0X9 1142 aa18.32■□□□□ 0.52
SDR39U1-219ENST00000556523 PKDCCQ504Y2 493 aa18.32■□□□□ 0.52
SDR39U1-219ENST00000556523 PIK3R6Q5UE93 754 aa18.32■□□□□ 0.52
SDR39U1-219ENST00000556523 BAHD1Q8TBE0 780 aaPredicted RBP18.32■□□□□ 0.52
SDR39U1-219ENST00000556523 TFAP2BQ92481 460 aa18.32■□□□□ 0.52
SDR39U1-219ENST00000556523 IGSF8Q969P0 613 aa18.32■□□□□ 0.52
SDR39U1-219ENST00000556523 BIRC7Q96CA5 298 aa18.32■□□□□ 0.52
SDR39U1-219ENST00000556523 KIAA1522Q9P206 1035 aaPredicted RBP18.32■□□□□ 0.52
SDR39U1-219ENST00000556523 ANKRD6Q9Y2G4 727 aa18.32■□□□□ 0.52
SDR39U1-219ENST00000556523 GOLGA6L7A0A1B0GV03 622 aa18.31■□□□□ 0.52
SDR39U1-219ENST00000556523 TAF4O00268 1085 aa18.31■□□□□ 0.52
SDR39U1-219ENST00000556523 ASLP04424 464 aa18.31■□□□□ 0.52
SDR39U1-219ENST00000556523 GRK6P43250 576 aa18.31■□□□□ 0.52
SDR39U1-219ENST00000556523 CDH18Q13634 790 aa18.31■□□□□ 0.52
SDR39U1-219ENST00000556523 COL9A2Q14055 689 aaPredicted RBP18.31■□□□□ 0.52
SDR39U1-219ENST00000556523 CNGA2Q16280 664 aa18.31■□□□□ 0.52
SDR39U1-219ENST00000556523 FAM133BQ5BKY9 247 aaKnown RBP18.31■□□□□ 0.52
SDR39U1-219ENST00000556523 PMF1Q6P1K2 205 aa18.31■□□□□ 0.52
SDR39U1-219ENST00000556523 FMR1NBQ8N0W7 255 aaPredicted RBP18.31■□□□□ 0.52
SDR39U1-219ENST00000556523 SLC35F5Q8WV83 523 aa18.31■□□□□ 0.52
SDR39U1-219ENST00000556523 HSFY1Q96LI6 401 aa18.31■□□□□ 0.52
SDR39U1-219ENST00000556523 SERPINB11Q96P15 392 aa18.31■□□□□ 0.52
SDR39U1-219ENST00000556523 MIS12Q9H081 205 aa18.31■□□□□ 0.52
SDR39U1-219ENST00000556523 SCML1Q9UN30 329 aa18.31■□□□□ 0.52
SDR39U1-219ENST00000556523 SLCO1B1Q9Y6L6 691 aa18.31■□□□□ 0.52
SDR39U1-219ENST00000556523 TMEM131Q92545 1883 aa18.31■□□□□ 0.52
SDR39U1-219ENST00000556523 PTPRBP23467 1997 aa18.3■□□□□ 0.52
SDR39U1-219ENST00000556523 FAM47DPA6NHR8 397 aa18.3■□□□□ 0.52
SDR39U1-219ENST00000556523 SART1O43290 800 aaKnown RBP18.3■□□□□ 0.52
SDR39U1-219ENST00000556523 ATXN1LP0C7T5 689 aaKnown RBP18.3■□□□□ 0.52
SDR39U1-219ENST00000556523 C7P10643 843 aa18.3■□□□□ 0.52
SDR39U1-219ENST00000556523 HOXB3P14651 431 aaPredicted RBP18.3■□□□□ 0.52
SDR39U1-219ENST00000556523 SLC6A4P31645 630 aa18.3■□□□□ 0.52
SDR39U1-219ENST00000556523 C21orf59P57076 290 aa18.3■□□□□ 0.52
SDR39U1-219ENST00000556523 KIAA0895LQ68EN5 471 aa18.3■□□□□ 0.52
SDR39U1-219ENST00000556523 LAYNQ6UX15 382 aa18.3■□□□□ 0.52
SDR39U1-219ENST00000556523 USP30Q70CQ3 517 aa18.3■□□□□ 0.52
SDR39U1-219ENST00000556523 GALNT15Q8N3T1 639 aa18.3■□□□□ 0.52
SDR39U1-219ENST00000556523 CARNMT1Q8N4J0 409 aa18.3■□□□□ 0.52
SDR39U1-219ENST00000556523 CLEC4CQ8WTT0 213 aa18.3■□□□□ 0.52
SDR39U1-219ENST00000556523 FAM149B1Q96BN6 582 aa18.3■□□□□ 0.52
SDR39U1-219ENST00000556523 PRICKLE1Q96MT3 831 aaPredicted RBP18.3■□□□□ 0.52
SDR39U1-219ENST00000556523 CEP63Q96MT8 703 aa18.3■□□□□ 0.52
SDR39U1-219ENST00000556523 RSPH9Q9H1X1 276 aaPredicted RBP18.3■□□□□ 0.52
SDR39U1-219ENST00000556523 PABPC3Q9H361 631 aaKnown RBP18.3■□□□□ 0.52
SDR39U1-219ENST00000556523 BTBD3Q9Y2F9 522 aa18.3■□□□□ 0.52
SDR39U1-219ENST00000556523 CEP83Q9Y592 693 aa18.3■□□□□ 0.52
SDR39U1-219ENST00000556523 PLXNB3Q9ULL4 1909 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms