RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 KIF28PB7ZC32 967 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 GOLGA6L19H0YKK7 550 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 P4HA2O15460 535 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 PPIP5K2O43314 1243 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 MGEA5O60502 916 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 DTNBO60941 627 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 ENTPD3O75355 529 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 FGF18O76093 207 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 PEX11BO96011 259 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 AGXTP21549 392 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 CTSSP25774 331 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 GNA11P29992 359 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 SYKP43405 635 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 NPTX2P47972 431 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 NOVP48745 357 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 GZMKP49863 264 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 PLCD1P51178 756 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 PSMC1P62191 440 aaKnown RBP5.54□□□□□ -1.52
SRP54-211ENST00000556445 GABPAQ06546 454 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 ABHD18Q0P651 414 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 GALNT1Q10472 559 aaPredicted RBP5.54□□□□□ -1.52
SRP54-211ENST00000556445 TRAF1Q13077 416 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 PPP2R5CQ13362 524 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 ORC2Q13416 577 aaPredicted RBP5.54□□□□□ -1.52
SRP54-211ENST00000556445 SPARCL1Q14515 664 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 SMC1AQ14683 1233 aaKnown RBP5.54□□□□□ -1.52
SRP54-211ENST00000556445 STARD3Q14849 445 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 PTPAQ15257 358 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 PKN2Q16513 984 aaKnown RBP5.54□□□□□ -1.52
SRP54-211ENST00000556445 GLIPR1L2Q4G1C9 344 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 ANO6Q4KMQ2 910 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 MFSD4BQ5TF39 518 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 RESP18Q5W5W9 173 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 NUGGCQ68CJ6 796 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 HEATR4Q86WZ0 1026 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 SYTL1Q8IYJ3 562 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 CEP57L1Q8IYX8 460 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 SRBD1Q8N5C6 995 aaKnown RBP5.54□□□□□ -1.52
SRP54-211ENST00000556445 SIMC1Q8NDZ2 872 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 OR52N2Q8NGI0 321 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 TSPEARQ8WU66 669 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 SNX33Q8WV41 574 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 BRI3BPQ8WY22 251 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 RRP36Q96EU6 259 aaKnown RBP5.54□□□□□ -1.52
SRP54-211ENST00000556445 DYNLL2Q96FJ2 89 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 RAX2Q96IS3 184 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 TMEM47Q9BQJ4 181 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 PDCD2LQ9BRP1 358 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 GLT8D2Q9H1C3 349 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 MAGEH1Q9H213 219 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 ZNF277Q9NRM2 450 aaPredicted RBP5.54□□□□□ -1.52
SRP54-211ENST00000556445 OLA1Q9NTK5 396 aaKnown RBP5.54□□□□□ -1.52
SRP54-211ENST00000556445 RGS17Q9UGC6 210 aaPredicted RBP5.54□□□□□ -1.52
SRP54-211ENST00000556445 SEC63Q9UGP8 760 aaKnown RBP5.54□□□□□ -1.52
SRP54-211ENST00000556445 TRPS1Q9UHF7 1281 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 DPP7Q9UHL4 492 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 MAGED2Q9UNF1 606 aaPredicted RBP5.54□□□□□ -1.52
SRP54-211ENST00000556445 STX8Q9UNK0 236 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 CORO2BQ9UQ03 480 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 SRPRBQ9Y5M8 271 aaKnown RBP5.54□□□□□ -1.52
SRP54-211ENST00000556445 CLIC4Q9Y696 253 aa5.54□□□□□ -1.52
SRP54-211ENST00000556445 PSME4Q14997 1843 aa5.53□□□□□ -1.52
SRP54-211ENST00000556445 ESYT2A0FGR8 921 aa5.53□□□□□ -1.52
SRP54-211ENST00000556445 BECN2A8MW95 431 aa5.53□□□□□ -1.52
SRP54-211ENST00000556445 KLRF2D3W0D1 207 aa5.53□□□□□ -1.52
SRP54-211ENST00000556445 LAD1O00515 517 aa5.53□□□□□ -1.52
SRP54-211ENST00000556445 FFAR2O15552 330 aa5.53□□□□□ -1.52
SRP54-211ENST00000556445 IRAK2O43187 625 aa5.53□□□□□ -1.52
SRP54-211ENST00000556445 PRAMEF4O60810 478 aa5.53□□□□□ -1.52
SRP54-211ENST00000556445 ZBED4O75132 1171 aa5.53□□□□□ -1.52
SRP54-211ENST00000556445 SKAP2O75563 359 aaPredicted RBP5.53□□□□□ -1.52
SRP54-211ENST00000556445 PLEKHA8P1O95397 391 aa5.53□□□□□ -1.52
SRP54-211ENST00000556445 TTLL1O95922 423 aa5.53□□□□□ -1.52
SRP54-211ENST00000556445 ALDH2P05091 517 aa5.53□□□□□ -1.52
SRP54-211ENST00000556445 GYPEP15421 78 aa5.53□□□□□ -1.52
SRP54-211ENST00000556445 HK1P19367 917 aa5.53□□□□□ -1.52
SRP54-211ENST00000556445 MUTP22033 750 aa5.53□□□□□ -1.52
SRP54-211ENST00000556445 MSNP26038 577 aaKnown RBP5.53□□□□□ -1.52
SRP54-211ENST00000556445 GUCY1A2P33402 732 aa5.53□□□□□ -1.52
SRP54-211ENST00000556445 PEX19P40855 299 aa5.53□□□□□ -1.52
SRP54-211ENST00000556445 RBM5P52756 815 aaKnown RBP eCLIP5.53□□□□□ -1.52
SRP54-211ENST00000556445 ZNF543Q08ER8 600 aa5.53□□□□□ -1.52
SRP54-211ENST00000556445 POLD3Q15054 466 aaPredicted RBP5.53□□□□□ -1.52
SRP54-211ENST00000556445 CAMK4Q16566 473 aa5.53□□□□□ -1.52
SRP54-211ENST00000556445 CFAP58Q5T655 872 aa5.53□□□□□ -1.52
SRP54-211ENST00000556445 FKBP1CQ5VVH2 108 aa5.53□□□□□ -1.52
SRP54-211ENST00000556445 ARL6IP4Q66PJ3 421 aaKnown RBP5.53□□□□□ -1.52
SRP54-211ENST00000556445 APOBEC3HQ6NTF7 200 aaKnown RBP5.53□□□□□ -1.52
SRP54-211ENST00000556445 CDC42EP5Q6NZY7 148 aa5.53□□□□□ -1.52
SRP54-211ENST00000556445 DOK3Q7L591 496 aa5.53□□□□□ -1.52
SRP54-211ENST00000556445 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.53□□□□□ -1.52
SRP54-211ENST00000556445 LRRTM4Q86VH4 590 aa5.53□□□□□ -1.52
SRP54-211ENST00000556445 BLIDQ8IZY5 108 aa5.53□□□□□ -1.52
SRP54-211ENST00000556445 CERS5Q8N5B7 392 aa5.53□□□□□ -1.52
SRP54-211ENST00000556445 ANKRD52Q8NB46 1076 aa5.53□□□□□ -1.52
SRP54-211ENST00000556445 AGBL3Q8NEM8 1001 aa5.53□□□□□ -1.52
SRP54-211ENST00000556445 ZMIZ2Q8NF64 920 aa5.53□□□□□ -1.52
SRP54-211ENST00000556445 ZNF483Q8TF39 744 aaPredicted RBP5.53□□□□□ -1.52
SRP54-211ENST00000556445 HIC2Q96JB3 615 aa5.53□□□□□ -1.52
SRP54-211ENST00000556445 RADILQ96JH8 1075 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms