RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 FAM72CH0Y354 149 aa14.51□□□□□ -0.09
VIPAS39-208ENST00000556412 TBL1XO60907 577 aa14.51□□□□□ -0.09
VIPAS39-208ENST00000556412 RARAP10276 462 aa14.51□□□□□ -0.09
VIPAS39-208ENST00000556412 AIF1P55008 147 aa14.51□□□□□ -0.09
VIPAS39-208ENST00000556412 RPS24P62847 133 aaKnown RBP14.51□□□□□ -0.09
VIPAS39-208ENST00000556412 GAD2Q05329 585 aa14.51□□□□□ -0.09
VIPAS39-208ENST00000556412 SCAPQ12770 1279 aa14.51□□□□□ -0.09
VIPAS39-208ENST00000556412 BOLA3Q53S33 107 aa14.51□□□□□ -0.09
VIPAS39-208ENST00000556412 RABGAP1LQ5R372 815 aa14.51□□□□□ -0.09
VIPAS39-208ENST00000556412 FAM72AQ5TYM5 149 aa14.51□□□□□ -0.09
VIPAS39-208ENST00000556412 FAM72DQ6L9T8 149 aa14.51□□□□□ -0.09
VIPAS39-208ENST00000556412 FAM72BQ86X60 149 aa14.51□□□□□ -0.09
VIPAS39-208ENST00000556412 FAM217AQ8IXS0 508 aa14.51□□□□□ -0.09
VIPAS39-208ENST00000556412 RNF10Q8N5U6 811 aaKnown RBP14.51□□□□□ -0.09
VIPAS39-208ENST00000556412 HJURPQ8NCD3 748 aaPredicted RBP14.51□□□□□ -0.09
VIPAS39-208ENST00000556412 DNASE1L2Q92874 299 aa14.51□□□□□ -0.09
VIPAS39-208ENST00000556412 PRMT1Q99873 361 aaKnown RBP14.51□□□□□ -0.09
VIPAS39-208ENST00000556412 SLC2A4RGQ9NR83 387 aa14.51□□□□□ -0.09
VIPAS39-208ENST00000556412 CA14Q9ULX7 337 aa14.51□□□□□ -0.09
VIPAS39-208ENST00000556412 PIAS3Q9Y6X2 628 aa14.51□□□□□ -0.09
VIPAS39-208ENST00000556412 USP27XA6NNY8 438 aa14.5□□□□□ -0.09
VIPAS39-208ENST00000556412 FTCDO95954 541 aa14.5□□□□□ -0.09
VIPAS39-208ENST00000556412 TYRP14679 529 aa14.5□□□□□ -0.09
VIPAS39-208ENST00000556412 KRT81Q14533 505 aa14.5□□□□□ -0.09
VIPAS39-208ENST00000556412 ATP13A4Q4VNC1 1196 aa14.5□□□□□ -0.09
VIPAS39-208ENST00000556412 ODF2Q5BJF6 829 aa14.5□□□□□ -0.09
VIPAS39-208ENST00000556412 CYP4V2Q6ZWL3 525 aaPredicted RBP14.5□□□□□ -0.09
VIPAS39-208ENST00000556412 RHOT1Q8IXI2 618 aa14.5□□□□□ -0.09
VIPAS39-208ENST00000556412 SYCE1Q8N0S2 351 aa14.5□□□□□ -0.09
VIPAS39-208ENST00000556412 IGSF8Q969P0 613 aa14.5□□□□□ -0.09
VIPAS39-208ENST00000556412 C1orf74Q96LT6 269 aa14.5□□□□□ -0.09
VIPAS39-208ENST00000556412 ALS2CR12Q96Q35 445 aa14.5□□□□□ -0.09
VIPAS39-208ENST00000556412 EPAS1Q99814 870 aa14.5□□□□□ -0.09
VIPAS39-208ENST00000556412 OSBPL2Q9H1P3 480 aa14.5□□□□□ -0.09
VIPAS39-208ENST00000556412 KRT7P08729 469 aa14.5□□□□□ -0.09
VIPAS39-208ENST00000556412 GJA4P35212 333 aa14.5□□□□□ -0.09
VIPAS39-208ENST00000556412 DNA2P51530 1060 aa14.5□□□□□ -0.09
VIPAS39-208ENST00000556412 IRAK1P51617 712 aa14.5□□□□□ -0.09
VIPAS39-208ENST00000556412 IER5LQ5T953 404 aa14.5□□□□□ -0.09
VIPAS39-208ENST00000556412 FYB2Q5VWT5 728 aa14.5□□□□□ -0.09
VIPAS39-208ENST00000556412 ZNF662Q6ZS27 426 aa14.5□□□□□ -0.09
VIPAS39-208ENST00000556412 PEX26Q7Z412 305 aa14.5□□□□□ -0.09
VIPAS39-208ENST00000556412 REXO1L1PQ8IX06 675 aa14.5□□□□□ -0.09
VIPAS39-208ENST00000556412 UBALD2Q8IYN6 164 aa14.5□□□□□ -0.09
VIPAS39-208ENST00000556412 CARNMT1Q8N4J0 409 aa14.5□□□□□ -0.09
VIPAS39-208ENST00000556412 LRRC57Q8N9N7 239 aa14.5□□□□□ -0.09
VIPAS39-208ENST00000556412 KCTD6Q8NC69 237 aa14.5□□□□□ -0.09
VIPAS39-208ENST00000556412 P2RY11Q96G91 374 aa14.5□□□□□ -0.09
VIPAS39-208ENST00000556412 KCTD15Q96SI1 283 aaPredicted RBP14.5□□□□□ -0.09
VIPAS39-208ENST00000556412 IRX2Q9BZI1 471 aaPredicted RBP14.5□□□□□ -0.09
VIPAS39-208ENST00000556412 MPP6Q9NZW5 540 aa14.5□□□□□ -0.09
VIPAS39-208ENST00000556412 ANAPC1Q9H1A4 1944 aa14.49□□□□□ -0.09
VIPAS39-208ENST00000556412 DAPK3O43293 454 aa14.49□□□□□ -0.09
VIPAS39-208ENST00000556412 LRIG2O94898 1065 aa14.49□□□□□ -0.09
VIPAS39-208ENST00000556412 KRT1P04264 644 aa14.49□□□□□ -0.09
VIPAS39-208ENST00000556412 EPHB2P29323 1055 aa14.49□□□□□ -0.09
VIPAS39-208ENST00000556412 CDH6P55285 790 aa14.49□□□□□ -0.09
VIPAS39-208ENST00000556412 TPI1P60174 286 aa14.49□□□□□ -0.09
VIPAS39-208ENST00000556412 SLC44A4Q53GD3 710 aa14.49□□□□□ -0.09
VIPAS39-208ENST00000556412 ACBD5Q5T8D3 534 aaPredicted RBP14.49□□□□□ -0.09
VIPAS39-208ENST00000556412 NAIF1Q69YI7 327 aaPredicted RBP14.49□□□□□ -0.09
VIPAS39-208ENST00000556412 TPRG1Q6ZUI0 275 aa14.49□□□□□ -0.09
VIPAS39-208ENST00000556412 TFAP2DQ7Z6R9 452 aa14.49□□□□□ -0.09
VIPAS39-208ENST00000556412 CCDC117Q8IWD4 279 aaPredicted RBP14.49□□□□□ -0.09
VIPAS39-208ENST00000556412 CCAR2Q8N163 923 aaKnown RBP14.49□□□□□ -0.09
VIPAS39-208ENST00000556412 C17orf53Q8N3J3 647 aaPredicted RBP14.49□□□□□ -0.09
VIPAS39-208ENST00000556412 TEKT4Q8WW24 435 aa14.49□□□□□ -0.09
VIPAS39-208ENST00000556412 TBC1D31Q96DN5 1066 aa14.49□□□□□ -0.09
VIPAS39-208ENST00000556412 CALN1Q9BXU9 219 aa14.49□□□□□ -0.09
VIPAS39-208ENST00000556412 TRPV5Q9NQA5 729 aa14.49□□□□□ -0.09
VIPAS39-208ENST00000556412 DNAJC17Q9NVM6 304 aaKnown RBP14.49□□□□□ -0.09
VIPAS39-208ENST00000556412 PACSIN2Q9UNF0 486 aaPredicted RBP14.49□□□□□ -0.09
VIPAS39-208ENST00000556412 SPECC1L-ADORA2AF8WAN1 911 aa14.48□□□□□ -0.09
VIPAS39-208ENST00000556412 PI4K2BG5E9Z4 385 aa14.48□□□□□ -0.09
VIPAS39-208ENST00000556412 H0Y626 953 aa14.48□□□□□ -0.09
VIPAS39-208ENST00000556412 EEF2KO00418 725 aaKnown RBP14.48□□□□□ -0.09
VIPAS39-208ENST00000556412 HOXC11O43248 304 aaPredicted RBP14.48□□□□□ -0.09
VIPAS39-208ENST00000556412 CNTN5O94779 1100 aa14.48□□□□□ -0.09
VIPAS39-208ENST00000556412 PENKP01210 267 aaPredicted RBP14.48□□□□□ -0.09
VIPAS39-208ENST00000556412 HOXD9P28356 352 aaPredicted RBP14.48□□□□□ -0.09
VIPAS39-208ENST00000556412 L1CAMP32004 1257 aa14.48□□□□□ -0.09
VIPAS39-208ENST00000556412 AMPD2Q01433 879 aa14.48□□□□□ -0.09
VIPAS39-208ENST00000556412 CDH18Q13634 790 aa14.48□□□□□ -0.09
VIPAS39-208ENST00000556412 C12orf40Q86WS4 652 aa14.48□□□□□ -0.09
VIPAS39-208ENST00000556412 PSTKQ8IV42 348 aaKnown RBP14.48□□□□□ -0.09
VIPAS39-208ENST00000556412 MFN1Q8IWA4 741 aa14.48□□□□□ -0.09
VIPAS39-208ENST00000556412 XPO6Q96QU8 1125 aaKnown RBP14.48□□□□□ -0.09
VIPAS39-208ENST00000556412 ZYG11BQ9C0D3 744 aa14.48□□□□□ -0.09
VIPAS39-208ENST00000556412 ARHGEF3Q9NR81 526 aa14.48□□□□□ -0.09
VIPAS39-208ENST00000556412 MARK1Q9P0L2 795 aa14.48□□□□□ -0.09
VIPAS39-208ENST00000556412 AMFRQ9UKV5 643 aa14.48□□□□□ -0.09
VIPAS39-208ENST00000556412 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.48□□□□□ -0.09
VIPAS39-208ENST00000556412 NUP210Q8TEM1 1887 aaPredicted RBP14.48□□□□□ -0.09
VIPAS39-208ENST00000556412 LRRD1A4D1F6 860 aa14.48□□□□□ -0.09
VIPAS39-208ENST00000556412 GFRA2O00451 464 aa14.48□□□□□ -0.09
VIPAS39-208ENST00000556412 GOT1P17174 413 aa14.48□□□□□ -0.09
VIPAS39-208ENST00000556412 CTHP32929 405 aa14.48□□□□□ -0.09
VIPAS39-208ENST00000556412 ARL4AP40617 200 aa14.48□□□□□ -0.09
VIPAS39-208ENST00000556412 SLC6A11P48066 632 aa14.48□□□□□ -0.09
VIPAS39-208ENST00000556412 MARCKSL1P49006 195 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms